Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 AL672167.1-204ENST00000641875 3017 ntBASIC4.92□□□□□ -1.62
NXF3Q9H4D5 AC000374.1-201ENST00000434698 1745 ntBASIC4.92□□□□□ -1.62
NXF3Q9H4D5 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.92□□□□□ -1.62
NXF3Q9H4D5 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
NXF3Q9H4D5 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC4.92□□□□□ -1.62
NXF3Q9H4D5 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
NXF3Q9H4D5 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC4.92□□□□□ -1.62
NXF3Q9H4D5 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
NXF3Q9H4D5 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
NXF3Q9H4D5 SDHCP2-201ENST00000398565 501 ntBASIC4.92□□□□□ -1.62
NXF3Q9H4D5 AL049693.1-201ENST00000402760 611 ntBASIC4.92□□□□□ -1.62
NXF3Q9H4D5 RPL21P108-201ENST00000413857 481 ntBASIC4.92□□□□□ -1.62
NXF3Q9H4D5 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.92□□□□□ -1.62
NXF3Q9H4D5 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.92□□□□□ -1.62
NXF3Q9H4D5 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.92□□□□□ -1.62
NXF3Q9H4D5 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.92□□□□□ -1.62
NXF3Q9H4D5 AC093267.1-201ENST00000489176 961 ntBASIC4.92□□□□□ -1.62
NXF3Q9H4D5 AC020890.1-201ENST00000491837 504 ntBASIC4.92□□□□□ -1.62
NXF3Q9H4D5 AC015795.1-201ENST00000513669 327 ntBASIC4.92□□□□□ -1.62
NXF3Q9H4D5 RN7SKP122-201ENST00000515923 296 ntBASIC4.92□□□□□ -1.62
NXF3Q9H4D5 RNU6-513P-201ENST00000516104 104 ntBASIC4.92□□□□□ -1.62
NXF3Q9H4D5 AP000827.1-201ENST00000527814 258 ntBASIC4.92□□□□□ -1.62
NXF3Q9H4D5 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
NXF3Q9H4D5 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC4.92□□□□□ -1.62
NXF3Q9H4D5 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.92□□□□□ -1.62
NXF3Q9H4D5 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.92□□□□□ -1.62
NXF3Q9H4D5 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC4.92□□□□□ -1.62
NXF3Q9H4D5 AC006840.1-201ENST00000623069 542 ntBASIC4.92□□□□□ -1.62
NXF3Q9H4D5 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
NXF3Q9H4D5 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
NXF3Q9H4D5 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
NXF3Q9H4D5 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
NXF3Q9H4D5 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.92□□□□□ -1.62
NXF3Q9H4D5 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
NXF3Q9H4D5 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
NXF3Q9H4D5 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
NXF3Q9H4D5 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
NXF3Q9H4D5 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.92□□□□□ -1.62
NXF3Q9H4D5 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
NXF3Q9H4D5 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
NXF3Q9H4D5 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
NXF3Q9H4D5 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
NXF3Q9H4D5 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.91□□□□□ -1.62
NXF3Q9H4D5 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
NXF3Q9H4D5 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.91□□□□□ -1.62
NXF3Q9H4D5 AL355852.1-201ENST00000454081 1771 ntBASIC4.91□□□□□ -1.62
NXF3Q9H4D5 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.91□□□□□ -1.62
NXF3Q9H4D5 RNU1-130P-201ENST00000363930 160 ntBASIC4.91□□□□□ -1.62
NXF3Q9H4D5 SNORA70.2-201ENST00000364506 135 ntBASIC4.91□□□□□ -1.62
NXF3Q9H4D5 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
NXF3Q9H4D5 RPL21P43-201ENST00000425440 472 ntBASIC4.91□□□□□ -1.62
NXF3Q9H4D5 NMNAT1P2-201ENST00000435192 860 ntBASIC4.91□□□□□ -1.62
NXF3Q9H4D5 NPM1P48-201ENST00000436002 853 ntBASIC4.91□□□□□ -1.62
NXF3Q9H4D5 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.91□□□□□ -1.62
NXF3Q9H4D5 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.91□□□□□ -1.62
NXF3Q9H4D5 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC4.91□□□□□ -1.62
NXF3Q9H4D5 RPS27AP16-201ENST00000492222 470 ntBASIC4.91□□□□□ -1.62
NXF3Q9H4D5 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.91□□□□□ -1.62
NXF3Q9H4D5 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC4.91□□□□□ -1.62
NXF3Q9H4D5 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC4.91□□□□□ -1.62
NXF3Q9H4D5 HMGB3P16-201ENST00000508037 287 ntBASIC4.91□□□□□ -1.62
NXF3Q9H4D5 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.91□□□□□ -1.62
NXF3Q9H4D5 AP002981.1-201ENST00000517692 975 ntBASIC4.91□□□□□ -1.62
NXF3Q9H4D5 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.91□□□□□ -1.62
NXF3Q9H4D5 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.91□□□□□ -1.62
NXF3Q9H4D5 AC023575.1-201ENST00000580510 358 ntBASIC4.91□□□□□ -1.62
NXF3Q9H4D5 AP001160.4-201ENST00000596971 382 ntBASIC4.91□□□□□ -1.62
NXF3Q9H4D5 AC130352.1-201ENST00000602979 661 ntBASIC4.91□□□□□ -1.62
NXF3Q9H4D5 AC005962.2-201ENST00000611427 652 ntBASIC4.91□□□□□ -1.62
NXF3Q9H4D5 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC4.91□□□□□ -1.62
NXF3Q9H4D5 AL035461.2-201ENST00000619201 524 ntBASIC4.91□□□□□ -1.62
NXF3Q9H4D5 AP003072.5-201ENST00000623872 773 ntBASIC4.91□□□□□ -1.62
NXF3Q9H4D5 MIR6830-201ENST00000636015 70 ntBASIC4.91□□□□□ -1.62
NXF3Q9H4D5 LINC01808-202ENST00000641680 1116 ntBASIC4.91□□□□□ -1.62
NXF3Q9H4D5 AC245100.2-201ENST00000454544 1679 ntBASIC4.91□□□□□ -1.62
NXF3Q9H4D5 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.91□□□□□ -1.62
NXF3Q9H4D5 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.91□□□□□ -1.62
NXF3Q9H4D5 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
NXF3Q9H4D5 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
NXF3Q9H4D5 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
NXF3Q9H4D5 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
NXF3Q9H4D5 AC027228.2-201ENST00000567141 2154 ntBASIC4.91□□□□□ -1.62
NXF3Q9H4D5 CPHL1P-201ENST00000461341 3407 ntBASIC4.91□□□□□ -1.62
NXF3Q9H4D5 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.91□□□□□ -1.62
NXF3Q9H4D5 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.91□□□□□ -1.62
NXF3Q9H4D5 HCFC2P1-201ENST00000392864 1592 ntBASIC4.91□□□□□ -1.62
NXF3Q9H4D5 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.91□□□□□ -1.62
NXF3Q9H4D5 AC123912.3-201ENST00000600907 1367 ntBASIC4.91□□□□□ -1.62
NXF3Q9H4D5 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.91□□□□□ -1.62
NXF3Q9H4D5 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.9□□□□□ -1.62
NXF3Q9H4D5 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
NXF3Q9H4D5 AC104260.2-201ENST00000623551 3497 ntBASIC4.9□□□□□ -1.62
NXF3Q9H4D5 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
NXF3Q9H4D5 TCP1P3-201ENST00000414406 1498 ntBASIC4.9□□□□□ -1.62
NXF3Q9H4D5 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC4.9□□□□□ -1.62
NXF3Q9H4D5 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
NXF3Q9H4D5 DHX9P1-201ENST00000436565 3076 ntBASIC4.9□□□□□ -1.62
NXF3Q9H4D5 AL672167.1-205ENST00000641112 3080 ntBASIC4.9□□□□□ -1.62
NXF3Q9H4D5 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
NXF3Q9H4D5 AL592291.1-201ENST00000403830 352 ntBASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 183.9 ms