Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 Y_RNA.517-201ENST00000384551 106 ntBASIC5.81□□□□□ -1.48
VPS11Q9H270 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
VPS11Q9H270 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC5.81□□□□□ -1.48
VPS11Q9H270 AK4P4-201ENST00000419465 646 ntBASIC5.81□□□□□ -1.48
VPS11Q9H270 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC5.81□□□□□ -1.48
VPS11Q9H270 RPL12P49-201ENST00000441100 121 ntBASIC5.81□□□□□ -1.48
VPS11Q9H270 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC5.81□□□□□ -1.48
VPS11Q9H270 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC5.81□□□□□ -1.48
VPS11Q9H270 AL445466.1-201ENST00000448432 357 ntBASIC5.81□□□□□ -1.48
VPS11Q9H270 RHEBP2-201ENST00000450289 600 ntBASIC5.81□□□□□ -1.48
VPS11Q9H270 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.81□□□□□ -1.48
VPS11Q9H270 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC5.81□□□□□ -1.48
VPS11Q9H270 AC097262.1-201ENST00000452559 548 ntBASIC5.81□□□□□ -1.48
VPS11Q9H270 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC5.81□□□□□ -1.48
VPS11Q9H270 GTF2IP12-201ENST00000456547 356 ntBASIC5.81□□□□□ -1.48
VPS11Q9H270 SNORD125-201ENST00000459538 96 ntBASIC5.81□□□□□ -1.48
VPS11Q9H270 AC110749.1-201ENST00000462007 357 ntBASIC5.81□□□□□ -1.48
VPS11Q9H270 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC5.81□□□□□ -1.48
VPS11Q9H270 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC5.81□□□□□ -1.48
VPS11Q9H270 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.81□□□□□ -1.48
VPS11Q9H270 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC5.81□□□□□ -1.48
VPS11Q9H270 MAST4-IT1-201ENST00000514241 658 ntBASIC5.81□□□□□ -1.48
VPS11Q9H270 MRPS5P3-201ENST00000515577 166 ntBASIC5.81□□□□□ -1.48
VPS11Q9H270 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC5.81□□□□□ -1.48
VPS11Q9H270 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.81□□□□□ -1.48
VPS11Q9H270 AC092851.1-201ENST00000535964 478 ntBASIC5.81□□□□□ -1.48
VPS11Q9H270 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.81□□□□□ -1.48
VPS11Q9H270 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.81□□□□□ -1.48
VPS11Q9H270 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC5.81□□□□□ -1.48
VPS11Q9H270 ACTR3BP3-201ENST00000565577 979 ntBASIC5.81□□□□□ -1.48
VPS11Q9H270 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
VPS11Q9H270 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC5.81□□□□□ -1.48
VPS11Q9H270 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC5.81□□□□□ -1.48
VPS11Q9H270 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.81□□□□□ -1.48
VPS11Q9H270 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.81□□□□□ -1.48
VPS11Q9H270 AC100767.2-201ENST00000604840 693 ntBASIC5.81□□□□□ -1.48
VPS11Q9H270 NQO2-209ENST00000606474 470 ntTSL 3 BASIC5.81□□□□□ -1.48
VPS11Q9H270 AL445222.1-201ENST00000607259 628 ntBASIC5.81□□□□□ -1.48
VPS11Q9H270 AC025253.1-201ENST00000613623 543 ntBASIC5.81□□□□□ -1.48
VPS11Q9H270 AC073569.3-201ENST00000619055 682 ntBASIC5.81□□□□□ -1.48
VPS11Q9H270 AC005899.6-201ENST00000620729 297 ntBASIC5.81□□□□□ -1.48
VPS11Q9H270 AC010608.2-201ENST00000624830 470 ntBASIC5.81□□□□□ -1.48
VPS11Q9H270 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.81□□□□□ -1.48
VPS11Q9H270 AC073488.3-201ENST00000631611 778 ntBASIC5.81□□□□□ -1.48
VPS11Q9H270 AL022311.1-201ENST00000623726 19416 ntBASIC5.81□□□□□ -1.48
VPS11Q9H270 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
VPS11Q9H270 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
VPS11Q9H270 RBPJP7-201ENST00000442803 1447 ntBASIC5.81□□□□□ -1.48
VPS11Q9H270 RBPJP5-201ENST00000449433 1447 ntBASIC5.81□□□□□ -1.48
VPS11Q9H270 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.81□□□□□ -1.48
VPS11Q9H270 AC007938.2-201ENST00000604666 2634 ntBASIC5.8□□□□□ -1.48
VPS11Q9H270 AC012254.3-201ENST00000591183 2117 ntBASIC5.8□□□□□ -1.48
VPS11Q9H270 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
VPS11Q9H270 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
VPS11Q9H270 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
VPS11Q9H270 AC093775.1-201ENST00000624154 1868 ntBASIC5.8□□□□□ -1.48
VPS11Q9H270 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
VPS11Q9H270 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
VPS11Q9H270 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
VPS11Q9H270 RNU6-249P-201ENST00000363016 102 ntBASIC5.8□□□□□ -1.48
VPS11Q9H270 Y_RNA.553-201ENST00000384670 102 ntBASIC5.8□□□□□ -1.48
VPS11Q9H270 RPL23AP59-201ENST00000399415 461 ntBASIC5.8□□□□□ -1.48
VPS11Q9H270 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.8□□□□□ -1.48
VPS11Q9H270 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC5.8□□□□□ -1.48
VPS11Q9H270 GPS2P1-201ENST00000411761 986 ntBASIC5.8□□□□□ -1.48
VPS11Q9H270 MTND1P21-201ENST00000412991 285 ntBASIC5.8□□□□□ -1.48
VPS11Q9H270 AL161449.1-201ENST00000414531 1199 ntBASIC5.8□□□□□ -1.48
VPS11Q9H270 AC079809.1-201ENST00000415468 276 ntBASIC5.8□□□□□ -1.48
VPS11Q9H270 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC5.8□□□□□ -1.48
VPS11Q9H270 ELOCP9-201ENST00000418624 239 ntBASIC5.8□□□□□ -1.48
VPS11Q9H270 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.8□□□□□ -1.48
VPS11Q9H270 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.8□□□□□ -1.48
VPS11Q9H270 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.8□□□□□ -1.48
VPS11Q9H270 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.8□□□□□ -1.48
VPS11Q9H270 AL022331.1-201ENST00000429025 477 ntBASIC5.8□□□□□ -1.48
VPS11Q9H270 AL139415.2-201ENST00000431968 163 ntBASIC5.8□□□□□ -1.48
VPS11Q9H270 FTH1P16-201ENST00000435241 552 ntBASIC5.8□□□□□ -1.48
VPS11Q9H270 USP9YP22-201ENST00000438971 294 ntBASIC5.8□□□□□ -1.48
VPS11Q9H270 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC5.8□□□□□ -1.48
VPS11Q9H270 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC5.8□□□□□ -1.48
VPS11Q9H270 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC5.8□□□□□ -1.48
VPS11Q9H270 CFL1P4-201ENST00000451536 498 ntBASIC5.8□□□□□ -1.48
VPS11Q9H270 RPL7P45-201ENST00000455851 743 ntBASIC5.8□□□□□ -1.48
VPS11Q9H270 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC5.8□□□□□ -1.48
VPS11Q9H270 AL133477.1-201ENST00000457472 514 ntBASIC5.8□□□□□ -1.48
VPS11Q9H270 AC023245.1-201ENST00000468501 517 ntBASIC5.8□□□□□ -1.48
VPS11Q9H270 RPS27P20-201ENST00000492051 246 ntBASIC5.8□□□□□ -1.48
VPS11Q9H270 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC5.8□□□□□ -1.48
VPS11Q9H270 AC111193.1-201ENST00000504097 155 ntBASIC5.8□□□□□ -1.48
VPS11Q9H270 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.8□□□□□ -1.48
VPS11Q9H270 GAPDHP71-201ENST00000511530 1003 ntBASIC5.8□□□□□ -1.48
VPS11Q9H270 SNORA70.11-201ENST00000515987 138 ntBASIC5.8□□□□□ -1.48
VPS11Q9H270 SNORA70.13-201ENST00000516116 138 ntBASIC5.8□□□□□ -1.48
VPS11Q9H270 RNA5SP441-201ENST00000516809 88 ntBASIC5.8□□□□□ -1.48
VPS11Q9H270 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
VPS11Q9H270 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.8□□□□□ -1.48
VPS11Q9H270 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.8□□□□□ -1.48
VPS11Q9H270 AP004609.2-201ENST00000532177 190 ntBASIC5.8□□□□□ -1.48
VPS11Q9H270 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
VPS11Q9H270 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 145.7 ms