Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 RPL36AP15-201ENST00000444514 266 ntBASIC5.21□□□□□ -1.58
CCSER1Q9C0I3 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC5.21□□□□□ -1.58
CCSER1Q9C0I3 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.21□□□□□ -1.58
CCSER1Q9C0I3 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC5.21□□□□□ -1.58
CCSER1Q9C0I3 ISCUP1-201ENST00000454451 448 ntBASIC5.21□□□□□ -1.58
CCSER1Q9C0I3 SCARNA10-201ENST00000459255 330 ntBASIC5.21□□□□□ -1.58
CCSER1Q9C0I3 RPS29P22-201ENST00000472363 168 ntBASIC5.21□□□□□ -1.58
CCSER1Q9C0I3 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC5.21□□□□□ -1.58
CCSER1Q9C0I3 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CCSER1Q9C0I3 AC147055.1-201ENST00000509261 750 ntBASIC5.21□□□□□ -1.58
CCSER1Q9C0I3 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC5.21□□□□□ -1.58
CCSER1Q9C0I3 RNA5SP446-201ENST00000515955 82 ntBASIC5.21□□□□□ -1.58
CCSER1Q9C0I3 AC008676.3-201ENST00000521237 435 ntBASIC5.21□□□□□ -1.58
CCSER1Q9C0I3 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.21□□□□□ -1.58
CCSER1Q9C0I3 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC5.21□□□□□ -1.58
CCSER1Q9C0I3 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC5.21□□□□□ -1.58
CCSER1Q9C0I3 FAM106CP-201ENST00000582212 507 ntBASIC5.21□□□□□ -1.58
CCSER1Q9C0I3 RPL27-207ENST00000590864 569 ntTSL 2 BASIC5.21□□□□□ -1.58
CCSER1Q9C0I3 AC068790.7-201ENST00000602347 528 ntBASIC5.21□□□□□ -1.58
CCSER1Q9C0I3 AC073091.2-201ENST00000603205 907 ntBASIC5.21□□□□□ -1.58
CCSER1Q9C0I3 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5.21□□□□□ -1.58
CCSER1Q9C0I3 MAPK10-286ENST00000641208 8747 ntBASIC5.21□□□□□ -1.58
CCSER1Q9C0I3 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CCSER1Q9C0I3 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CCSER1Q9C0I3 AC126323.6-202ENST00000568092 3511 ntBASIC5.21□□□□□ -1.58
CCSER1Q9C0I3 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
CCSER1Q9C0I3 EEF1A1P42-201ENST00000613436 1331 ntBASIC5.21□□□□□ -1.58
CCSER1Q9C0I3 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
CCSER1Q9C0I3 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CCSER1Q9C0I3 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCSER1Q9C0I3 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.2□□□□□ -1.58
CCSER1Q9C0I3 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CCSER1Q9C0I3 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.2□□□□□ -1.58
CCSER1Q9C0I3 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.2□□□□□ -1.58
CCSER1Q9C0I3 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CCSER1Q9C0I3 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC5.2□□□□□ -1.58
CCSER1Q9C0I3 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CCSER1Q9C0I3 RN7SKP97-201ENST00000410966 333 ntBASIC5.2□□□□□ -1.58
CCSER1Q9C0I3 AL590139.1-201ENST00000416267 400 ntBASIC5.2□□□□□ -1.58
CCSER1Q9C0I3 ATG4AP1-201ENST00000416893 538 ntBASIC5.2□□□□□ -1.58
CCSER1Q9C0I3 AC093084.1-201ENST00000424233 687 ntBASIC5.2□□□□□ -1.58
CCSER1Q9C0I3 AL359265.2-201ENST00000434367 631 ntBASIC5.2□□□□□ -1.58
CCSER1Q9C0I3 RPS4XP18-201ENST00000495480 763 ntBASIC5.2□□□□□ -1.58
CCSER1Q9C0I3 HAUS1P1-201ENST00000505275 832 ntBASIC5.2□□□□□ -1.58
CCSER1Q9C0I3 AC098799.3-201ENST00000506095 438 ntBASIC5.2□□□□□ -1.58
CCSER1Q9C0I3 AC007016.1-201ENST00000512110 244 ntBASIC5.2□□□□□ -1.58
CCSER1Q9C0I3 OR7H2P-201ENST00000513483 306 ntBASIC5.2□□□□□ -1.58
CCSER1Q9C0I3 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.2□□□□□ -1.58
CCSER1Q9C0I3 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.2□□□□□ -1.58
CCSER1Q9C0I3 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC5.2□□□□□ -1.58
CCSER1Q9C0I3 AC008147.3-201ENST00000548666 354 ntBASIC5.2□□□□□ -1.58
CCSER1Q9C0I3 AC063949.1-201ENST00000552900 865 ntBASIC5.2□□□□□ -1.58
CCSER1Q9C0I3 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
CCSER1Q9C0I3 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC5.2□□□□□ -1.58
CCSER1Q9C0I3 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC5.2□□□□□ -1.58
CCSER1Q9C0I3 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.2□□□□□ -1.58
CCSER1Q9C0I3 AC096553.1-201ENST00000605169 829 ntBASIC5.2□□□□□ -1.58
CCSER1Q9C0I3 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.2□□□□□ -1.58
CCSER1Q9C0I3 MIR6780A-201ENST00000615089 68 ntBASIC5.2□□□□□ -1.58
CCSER1Q9C0I3 AC015722.2-201ENST00000622210 551 ntBASIC5.2□□□□□ -1.58
CCSER1Q9C0I3 AC005086.4-201ENST00000623065 213 ntBASIC5.2□□□□□ -1.58
CCSER1Q9C0I3 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCSER1Q9C0I3 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CCSER1Q9C0I3 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCSER1Q9C0I3 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CCSER1Q9C0I3 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
CCSER1Q9C0I3 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.19□□□□□ -1.58
CCSER1Q9C0I3 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
CCSER1Q9C0I3 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CCSER1Q9C0I3 RN7SKP115-201ENST00000363177 317 ntBASIC5.19□□□□□ -1.58
CCSER1Q9C0I3 SNORD96B-201ENST00000386148 79 ntBASIC5.19□□□□□ -1.58
CCSER1Q9C0I3 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CCSER1Q9C0I3 MAST4-207ENST00000407621 559 ntTSL 2 BASIC5.19□□□□□ -1.58
CCSER1Q9C0I3 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC5.19□□□□□ -1.58
CCSER1Q9C0I3 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC5.19□□□□□ -1.58
CCSER1Q9C0I3 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.19□□□□□ -1.58
CCSER1Q9C0I3 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.19□□□□□ -1.58
CCSER1Q9C0I3 RPL21P91-201ENST00000429231 479 ntBASIC5.19□□□□□ -1.58
CCSER1Q9C0I3 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CCSER1Q9C0I3 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC5.19□□□□□ -1.58
CCSER1Q9C0I3 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.19□□□□□ -1.58
CCSER1Q9C0I3 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC5.19□□□□□ -1.58
CCSER1Q9C0I3 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.19□□□□□ -1.58
CCSER1Q9C0I3 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CCSER1Q9C0I3 HMGB2P1-201ENST00000591146 634 ntBASIC5.19□□□□□ -1.58
CCSER1Q9C0I3 AC023762.1-201ENST00000603280 584 ntBASIC5.19□□□□□ -1.58
CCSER1Q9C0I3 AC140113.4-201ENST00000622087 222 ntBASIC5.19□□□□□ -1.58
CCSER1Q9C0I3 AC105105.5-201ENST00000622635 1294 ntBASIC5.19□□□□□ -1.58
CCSER1Q9C0I3 AP003499.2-201ENST00000624100 483 ntBASIC5.19□□□□□ -1.58
CCSER1Q9C0I3 U3.53-201ENST00000628922 216 ntBASIC5.19□□□□□ -1.58
CCSER1Q9C0I3 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CCSER1Q9C0I3 AC108751.5-201ENST00000492880 1336 ntBASIC5.19□□□□□ -1.58
CCSER1Q9C0I3 AC012618.3-205ENST00000637896 1496 ntBASIC5.19□□□□□ -1.58
CCSER1Q9C0I3 AL391684.1-202ENST00000641293 1636 ntBASIC5.19□□□□□ -1.58
CCSER1Q9C0I3 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CCSER1Q9C0I3 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC5.19□□□□□ -1.58
CCSER1Q9C0I3 MAPK10-263ENST00000641052 4307 ntBASIC5.18□□□□□ -1.58
CCSER1Q9C0I3 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CCSER1Q9C0I3 AC010928.1-201ENST00000592477 1447 ntBASIC5.18□□□□□ -1.58
CCSER1Q9C0I3 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms