Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.84□□□□□ -1.63
TRIM4Q9C037 NDUFB4P12-201ENST00000513465 390 ntBASIC4.84□□□□□ -1.63
TRIM4Q9C037 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.84□□□□□ -1.63
TRIM4Q9C037 AGGF1P9-201ENST00000561884 913 ntBASIC4.84□□□□□ -1.63
TRIM4Q9C037 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
TRIM4Q9C037 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC4.84□□□□□ -1.63
TRIM4Q9C037 CCDC58P3-201ENST00000590792 430 ntBASIC4.84□□□□□ -1.63
TRIM4Q9C037 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
TRIM4Q9C037 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.84□□□□□ -1.63
TRIM4Q9C037 AC103792.1-201ENST00000603591 919 ntBASIC4.84□□□□□ -1.63
TRIM4Q9C037 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC4.84□□□□□ -1.63
TRIM4Q9C037 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
TRIM4Q9C037 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
TRIM4Q9C037 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
TRIM4Q9C037 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.84□□□□□ -1.63
TRIM4Q9C037 THAP12P4-201ENST00000528321 2266 ntBASIC4.84□□□□□ -1.64
TRIM4Q9C037 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
TRIM4Q9C037 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC4.84□□□□□ -1.64
TRIM4Q9C037 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
TRIM4Q9C037 AL672167.1-203ENST00000641299 2975 ntBASIC4.83□□□□□ -1.64
TRIM4Q9C037 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
TRIM4Q9C037 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.83□□□□□ -1.64
TRIM4Q9C037 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
TRIM4Q9C037 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.83□□□□□ -1.64
TRIM4Q9C037 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
TRIM4Q9C037 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC4.83□□□□□ -1.64
TRIM4Q9C037 MIR600-201ENST00000385007 98 ntBASIC4.83□□□□□ -1.64
TRIM4Q9C037 OR8V1P-201ENST00000395193 873 ntBASIC4.83□□□□□ -1.64
TRIM4Q9C037 AL592291.1-201ENST00000403830 352 ntBASIC4.83□□□□□ -1.64
TRIM4Q9C037 BX323845.1-201ENST00000432417 179 ntBASIC4.83□□□□□ -1.64
TRIM4Q9C037 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.83□□□□□ -1.64
TRIM4Q9C037 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.83□□□□□ -1.64
TRIM4Q9C037 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.83□□□□□ -1.64
TRIM4Q9C037 CDC27P1-201ENST00000445384 715 ntBASIC4.83□□□□□ -1.64
TRIM4Q9C037 TDGF1P1-201ENST00000445734 527 ntBASIC4.83□□□□□ -1.64
TRIM4Q9C037 AC044797.1-201ENST00000445744 679 ntBASIC4.83□□□□□ -1.64
TRIM4Q9C037 RPL10P17-201ENST00000453852 316 ntBASIC4.83□□□□□ -1.64
TRIM4Q9C037 RN7SL517P-201ENST00000462240 305 ntBASIC4.83□□□□□ -1.64
TRIM4Q9C037 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.83□□□□□ -1.64
TRIM4Q9C037 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
TRIM4Q9C037 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.83□□□□□ -1.64
TRIM4Q9C037 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
TRIM4Q9C037 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
TRIM4Q9C037 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
TRIM4Q9C037 UBE2FP2-201ENST00000566646 462 ntBASIC4.83□□□□□ -1.64
TRIM4Q9C037 MIR4691-201ENST00000583764 85 ntBASIC4.83□□□□□ -1.64
TRIM4Q9C037 MIR4737-201ENST00000583979 81 ntBASIC4.83□□□□□ -1.64
TRIM4Q9C037 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.83□□□□□ -1.64
TRIM4Q9C037 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.83□□□□□ -1.64
TRIM4Q9C037 BNIP3P35-201ENST00000604530 490 ntBASIC4.83□□□□□ -1.64
TRIM4Q9C037 AC091979.2-201ENST00000607514 214 ntBASIC4.83□□□□□ -1.64
TRIM4Q9C037 RMST_9.1-201ENST00000619945 193 ntBASIC4.83□□□□□ -1.64
TRIM4Q9C037 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.83□□□□□ -1.64
TRIM4Q9C037 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC4.83□□□□□ -1.64
TRIM4Q9C037 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
TRIM4Q9C037 AC011266.1-201ENST00000624119 3569 ntBASIC4.83□□□□□ -1.64
TRIM4Q9C037 AC107027.3-201ENST00000565095 3473 ntBASIC4.83□□□□□ -1.64
TRIM4Q9C037 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
TRIM4Q9C037 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.83□□□□□ -1.64
TRIM4Q9C037 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.83□□□□□ -1.64
TRIM4Q9C037 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.83□□□□□ -1.64
TRIM4Q9C037 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
TRIM4Q9C037 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
TRIM4Q9C037 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
TRIM4Q9C037 XKRY2-202ENST00000623874 1581 ntBASIC4.82□□□□□ -1.64
TRIM4Q9C037 XKRY-202ENST00000624960 1581 ntBASIC4.82□□□□□ -1.64
TRIM4Q9C037 AL450326.2-201ENST00000421913 1962 ntBASIC4.82□□□□□ -1.64
TRIM4Q9C037 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
TRIM4Q9C037 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
TRIM4Q9C037 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.82□□□□□ -1.64
TRIM4Q9C037 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC4.82□□□□□ -1.64
TRIM4Q9C037 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
TRIM4Q9C037 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
TRIM4Q9C037 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
TRIM4Q9C037 RNA5SP502-201ENST00000362694 119 ntBASIC4.82□□□□□ -1.64
TRIM4Q9C037 AL359837.1-201ENST00000381357 287 ntBASIC4.82□□□□□ -1.64
TRIM4Q9C037 AL050305.1-201ENST00000399993 1230 ntBASIC4.82□□□□□ -1.64
TRIM4Q9C037 AL035079.1-201ENST00000405210 287 ntBASIC4.82□□□□□ -1.64
TRIM4Q9C037 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.82□□□□□ -1.64
TRIM4Q9C037 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.82□□□□□ -1.64
TRIM4Q9C037 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.82□□□□□ -1.64
TRIM4Q9C037 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
TRIM4Q9C037 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.82□□□□□ -1.64
TRIM4Q9C037 AC073143.1-201ENST00000436316 395 ntBASIC4.82□□□□□ -1.64
TRIM4Q9C037 RHOT1P3-201ENST00000436571 331 ntBASIC4.82□□□□□ -1.64
TRIM4Q9C037 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC4.82□□□□□ -1.64
TRIM4Q9C037 NUTF2P7-201ENST00000453086 375 ntBASIC4.82□□□□□ -1.64
TRIM4Q9C037 SCARNA10-201ENST00000459255 330 ntBASIC4.82□□□□□ -1.64
TRIM4Q9C037 AC073073.1-201ENST00000493920 463 ntBASIC4.82□□□□□ -1.64
TRIM4Q9C037 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC4.82□□□□□ -1.64
TRIM4Q9C037 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC4.82□□□□□ -1.64
TRIM4Q9C037 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.82□□□□□ -1.64
TRIM4Q9C037 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.82□□□□□ -1.64
TRIM4Q9C037 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.82□□□□□ -1.64
TRIM4Q9C037 AC012400.1-201ENST00000518452 381 ntBASIC4.82□□□□□ -1.64
TRIM4Q9C037 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.82□□□□□ -1.64
TRIM4Q9C037 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.82□□□□□ -1.64
TRIM4Q9C037 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC4.82□□□□□ -1.64
TRIM4Q9C037 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
TRIM4Q9C037 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms