Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 AC112198.2-201ENST00000426589 6996 ntBASIC5.45□□□□□ -1.54
TRIM54Q9BYV2 AC068870.1-201ENST00000563737 2455 ntBASIC5.45□□□□□ -1.54
TRIM54Q9BYV2 RNU6-249P-201ENST00000363016 102 ntBASIC5.45□□□□□ -1.54
TRIM54Q9BYV2 RN7SKP81-201ENST00000365603 331 ntBASIC5.45□□□□□ -1.54
TRIM54Q9BYV2 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.45□□□□□ -1.54
TRIM54Q9BYV2 PEX12P1-201ENST00000400284 1048 ntBASIC5.45□□□□□ -1.54
TRIM54Q9BYV2 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC5.45□□□□□ -1.54
TRIM54Q9BYV2 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC5.45□□□□□ -1.54
TRIM54Q9BYV2 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC5.45□□□□□ -1.54
TRIM54Q9BYV2 AL365338.1-201ENST00000422282 858 ntBASIC5.45□□□□□ -1.54
TRIM54Q9BYV2 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.45□□□□□ -1.54
TRIM54Q9BYV2 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.45□□□□□ -1.54
TRIM54Q9BYV2 CNOT7P1-201ENST00000429006 852 ntBASIC5.45□□□□□ -1.54
TRIM54Q9BYV2 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
TRIM54Q9BYV2 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC5.45□□□□□ -1.54
TRIM54Q9BYV2 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.45□□□□□ -1.54
TRIM54Q9BYV2 AL358876.1-201ENST00000453364 1075 ntBASIC5.45□□□□□ -1.54
TRIM54Q9BYV2 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TRIM54Q9BYV2 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC5.45□□□□□ -1.54
TRIM54Q9BYV2 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.45□□□□□ -1.54
TRIM54Q9BYV2 AC105313.1-201ENST00000509121 353 ntBASIC5.45□□□□□ -1.54
TRIM54Q9BYV2 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC5.45□□□□□ -1.54
TRIM54Q9BYV2 AC138938.1-201ENST00000515431 782 ntBASIC5.45□□□□□ -1.54
TRIM54Q9BYV2 SNORA43.3-201ENST00000517240 103 ntBASIC5.45□□□□□ -1.54
TRIM54Q9BYV2 IGJP1-201ENST00000522682 475 ntBASIC5.45□□□□□ -1.54
TRIM54Q9BYV2 AC018442.3-201ENST00000523025 183 ntBASIC5.45□□□□□ -1.54
TRIM54Q9BYV2 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC5.45□□□□□ -1.54
TRIM54Q9BYV2 NANOGNBP2-201ENST00000544753 553 ntBASIC5.45□□□□□ -1.54
TRIM54Q9BYV2 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC5.45□□□□□ -1.54
TRIM54Q9BYV2 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.45□□□□□ -1.54
TRIM54Q9BYV2 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC5.45□□□□□ -1.54
TRIM54Q9BYV2 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.45□□□□□ -1.54
TRIM54Q9BYV2 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.45□□□□□ -1.54
TRIM54Q9BYV2 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.45□□□□□ -1.54
TRIM54Q9BYV2 MRPS35P3-201ENST00000603189 709 ntBASIC5.45□□□□□ -1.54
TRIM54Q9BYV2 AC013444.2-201ENST00000603317 787 ntBASIC5.45□□□□□ -1.54
TRIM54Q9BYV2 uc_338.7-201ENST00000621834 124 ntBASIC5.45□□□□□ -1.54
TRIM54Q9BYV2 AC006840.1-201ENST00000623069 542 ntBASIC5.45□□□□□ -1.54
TRIM54Q9BYV2 AC092608.3-201ENST00000625017 386 ntBASIC5.45□□□□□ -1.54
TRIM54Q9BYV2 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.45□□□□□ -1.54
TRIM54Q9BYV2 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.45□□□□□ -1.54
TRIM54Q9BYV2 AC104454.1-201ENST00000421341 1401 ntBASIC5.45□□□□□ -1.54
TRIM54Q9BYV2 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
TRIM54Q9BYV2 CASC19-206ENST00000641028 1430 ntBASIC5.45□□□□□ -1.54
TRIM54Q9BYV2 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TRIM54Q9BYV2 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TRIM54Q9BYV2 MRE11P1-201ENST00000464884 2127 ntBASIC5.45□□□□□ -1.54
TRIM54Q9BYV2 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TRIM54Q9BYV2 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.45□□□□□ -1.54
TRIM54Q9BYV2 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TRIM54Q9BYV2 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TRIM54Q9BYV2 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TRIM54Q9BYV2 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
TRIM54Q9BYV2 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TRIM54Q9BYV2 AC093849.1-201ENST00000563631 2209 ntBASIC5.44□□□□□ -1.54
TRIM54Q9BYV2 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TRIM54Q9BYV2 LINC01963-201ENST00000562038 3148 ntBASIC5.44□□□□□ -1.54
TRIM54Q9BYV2 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
TRIM54Q9BYV2 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TRIM54Q9BYV2 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TRIM54Q9BYV2 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TRIM54Q9BYV2 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TRIM54Q9BYV2 RNA5SP131-201ENST00000365452 119 ntBASIC5.44□□□□□ -1.54
TRIM54Q9BYV2 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.44□□□□□ -1.54
TRIM54Q9BYV2 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
TRIM54Q9BYV2 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC5.44□□□□□ -1.54
TRIM54Q9BYV2 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TRIM54Q9BYV2 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.44□□□□□ -1.54
TRIM54Q9BYV2 GAPDHP49-201ENST00000421421 961 ntBASIC5.44□□□□□ -1.54
TRIM54Q9BYV2 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC5.44□□□□□ -1.54
TRIM54Q9BYV2 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.44□□□□□ -1.54
TRIM54Q9BYV2 FAM96AP1-201ENST00000430879 482 ntBASIC5.44□□□□□ -1.54
TRIM54Q9BYV2 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TRIM54Q9BYV2 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.44□□□□□ -1.54
TRIM54Q9BYV2 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.44□□□□□ -1.54
TRIM54Q9BYV2 AC073465.2-201ENST00000440938 498 ntBASIC5.44□□□□□ -1.54
TRIM54Q9BYV2 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TRIM54Q9BYV2 HMGB1P48-201ENST00000446155 598 ntBASIC5.44□□□□□ -1.54
TRIM54Q9BYV2 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC5.44□□□□□ -1.54
TRIM54Q9BYV2 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
TRIM54Q9BYV2 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC5.44□□□□□ -1.54
TRIM54Q9BYV2 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TRIM54Q9BYV2 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.44□□□□□ -1.54
TRIM54Q9BYV2 BX248409.1-201ENST00000455497 255 ntBASIC5.44□□□□□ -1.54
TRIM54Q9BYV2 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC5.44□□□□□ -1.54
TRIM54Q9BYV2 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC5.44□□□□□ -1.54
TRIM54Q9BYV2 RPL23AP12-201ENST00000467573 473 ntBASIC5.44□□□□□ -1.54
TRIM54Q9BYV2 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC5.44□□□□□ -1.54
TRIM54Q9BYV2 NDUFA5P9-201ENST00000472609 340 ntBASIC5.44□□□□□ -1.54
TRIM54Q9BYV2 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.44□□□□□ -1.54
TRIM54Q9BYV2 TMEM97P2-201ENST00000517841 403 ntBASIC5.44□□□□□ -1.54
TRIM54Q9BYV2 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC5.44□□□□□ -1.54
TRIM54Q9BYV2 OR8A2P-201ENST00000528631 952 ntBASIC5.44□□□□□ -1.54
TRIM54Q9BYV2 AC005363.1-201ENST00000530779 351 ntBASIC5.44□□□□□ -1.54
TRIM54Q9BYV2 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.44□□□□□ -1.54
TRIM54Q9BYV2 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.44□□□□□ -1.54
TRIM54Q9BYV2 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.44□□□□□ -1.54
TRIM54Q9BYV2 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.44□□□□□ -1.54
TRIM54Q9BYV2 AADACP1-206ENST00000561502 1193 ntBASIC5.44□□□□□ -1.54
TRIM54Q9BYV2 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms