Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SCAPERQ9BY12 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC6.78□□□□□ -1.32
SCAPERQ9BY12 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC6.78□□□□□ -1.32
SCAPERQ9BY12 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC6.78□□□□□ -1.32
SCAPERQ9BY12 AP000648.2-201ENST00000624182 404 ntBASIC6.78□□□□□ -1.32
SCAPERQ9BY12 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SCAPERQ9BY12 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SCAPERQ9BY12 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SCAPERQ9BY12 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SCAPERQ9BY12 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
SCAPERQ9BY12 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC6.78□□□□□ -1.32
SCAPERQ9BY12 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
SCAPERQ9BY12 ADAM5-202ENST00000399789 1942 ntBASIC6.77□□□□□ -1.33
SCAPERQ9BY12 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
SCAPERQ9BY12 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
SCAPERQ9BY12 AL672167.2-201ENST00000377164 879 ntBASIC6.77□□□□□ -1.33
SCAPERQ9BY12 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
SCAPERQ9BY12 AL583835.1-201ENST00000399570 407 ntBASIC6.77□□□□□ -1.33
SCAPERQ9BY12 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
SCAPERQ9BY12 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC6.77□□□□□ -1.33
SCAPERQ9BY12 VN1R105P-201ENST00000486595 910 ntBASIC6.77□□□□□ -1.33
SCAPERQ9BY12 TPT1P3-201ENST00000492841 512 ntBASIC6.77□□□□□ -1.33
SCAPERQ9BY12 TRIM36-IT1-201ENST00000503723 881 ntBASIC6.77□□□□□ -1.33
SCAPERQ9BY12 AC105031.1-201ENST00000518550 476 ntBASIC6.77□□□□□ -1.33
SCAPERQ9BY12 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC6.77□□□□□ -1.33
SCAPERQ9BY12 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC6.77□□□□□ -1.33
SCAPERQ9BY12 OR51C1P-201ENST00000608504 942 ntBASIC6.77□□□□□ -1.33
SCAPERQ9BY12 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC6.77□□□□□ -1.33
SCAPERQ9BY12 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC6.77□□□□□ -1.33
SCAPERQ9BY12 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC6.77□□□□□ -1.33
SCAPERQ9BY12 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
SCAPERQ9BY12 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
SCAPERQ9BY12 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
SCAPERQ9BY12 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
SCAPERQ9BY12 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
SCAPERQ9BY12 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
SCAPERQ9BY12 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
SCAPERQ9BY12 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC6.77□□□□□ -1.33
SCAPERQ9BY12 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC6.77□□□□□ -1.33
SCAPERQ9BY12 AL358178.1-201ENST00000407698 397 ntBASIC6.76□□□□□ -1.33
SCAPERQ9BY12 RN7SKP33-201ENST00000410942 340 ntBASIC6.76□□□□□ -1.33
SCAPERQ9BY12 AL121878.1-201ENST00000418638 859 ntBASIC6.76□□□□□ -1.33
SCAPERQ9BY12 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC6.76□□□□□ -1.33
SCAPERQ9BY12 BTF3P6-201ENST00000448054 499 ntBASIC6.76□□□□□ -1.33
SCAPERQ9BY12 RPL5P32-201ENST00000454085 879 ntBASIC6.76□□□□□ -1.33
SCAPERQ9BY12 AC069304.1-201ENST00000491593 704 ntBASIC6.76□□□□□ -1.33
SCAPERQ9BY12 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC6.76□□□□□ -1.33
SCAPERQ9BY12 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC6.76□□□□□ -1.33
SCAPERQ9BY12 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC6.76□□□□□ -1.33
SCAPERQ9BY12 HNRNPCP4-201ENST00000571636 900 ntBASIC6.76□□□□□ -1.33
SCAPERQ9BY12 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SCAPERQ9BY12 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC6.76□□□□□ -1.33
SCAPERQ9BY12 MIR6875-201ENST00000617506 72 ntBASIC6.76□□□□□ -1.33
SCAPERQ9BY12 AC112484.5-201ENST00000624189 228 ntBASIC6.76□□□□□ -1.33
SCAPERQ9BY12 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC6.76□□□□□ -1.33
SCAPERQ9BY12 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC6.76□□□□□ -1.33
SCAPERQ9BY12 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.76□□□□□ -1.33
SCAPERQ9BY12 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
SCAPERQ9BY12 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SCAPERQ9BY12 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
SCAPERQ9BY12 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC6.76□□□□□ -1.33
SCAPERQ9BY12 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
SCAPERQ9BY12 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
SCAPERQ9BY12 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC6.76□□□□□ -1.33
SCAPERQ9BY12 AL034370.1-201ENST00000397254 1590 ntBASIC6.76□□□□□ -1.33
SCAPERQ9BY12 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC6.76□□□□□ -1.33
SCAPERQ9BY12 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
SCAPERQ9BY12 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SCAPERQ9BY12 5S_rRNA.1-201ENST00000364415 116 ntBASIC6.76□□□□□ -1.33
SCAPERQ9BY12 RN7SKP159-201ENST00000410657 292 ntBASIC6.76□□□□□ -1.33
SCAPERQ9BY12 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC6.76□□□□□ -1.33
SCAPERQ9BY12 TCEA1P3-201ENST00000443005 880 ntBASIC6.76□□□□□ -1.33
SCAPERQ9BY12 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC6.76□□□□□ -1.33
SCAPERQ9BY12 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC6.76□□□□□ -1.33
SCAPERQ9BY12 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC6.76□□□□□ -1.33
SCAPERQ9BY12 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC6.76□□□□□ -1.33
SCAPERQ9BY12 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC6.76□□□□□ -1.33
SCAPERQ9BY12 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC6.76□□□□□ -1.33
SCAPERQ9BY12 AL161729.3-201ENST00000603533 673 ntBASIC6.76□□□□□ -1.33
SCAPERQ9BY12 AP003400.2-201ENST00000624036 666 ntBASIC6.76□□□□□ -1.33
SCAPERQ9BY12 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC6.76□□□□□ -1.33
SCAPERQ9BY12 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC6.75□□□□□ -1.33
SCAPERQ9BY12 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
SCAPERQ9BY12 AL136164.3-201ENST00000624429 3978 ntBASIC6.75□□□□□ -1.33
SCAPERQ9BY12 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
SCAPERQ9BY12 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC6.75□□□□□ -1.33
SCAPERQ9BY12 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SCAPERQ9BY12 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
SCAPERQ9BY12 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SCAPERQ9BY12 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC6.75□□□□□ -1.33
SCAPERQ9BY12 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SCAPERQ9BY12 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
SCAPERQ9BY12 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
SCAPERQ9BY12 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC6.75□□□□□ -1.33
SCAPERQ9BY12 RNA5SP513-201ENST00000364648 118 ntBASIC6.75□□□□□ -1.33
SCAPERQ9BY12 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
SCAPERQ9BY12 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC6.75□□□□□ -1.33
SCAPERQ9BY12 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC6.75□□□□□ -1.33
SCAPERQ9BY12 AL162151.2-201ENST00000448875 158 ntBASIC6.75□□□□□ -1.33
SCAPERQ9BY12 AC109635.6-201ENST00000525487 1113 ntBASIC6.75□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms