Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 AP000357.1-201ENST00000409926 1165 ntBASIC5.82□□□□□ -1.48
ABCA3Q99758 PCNPP4-201ENST00000414817 517 ntBASIC5.82□□□□□ -1.48
ABCA3Q99758 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC5.82□□□□□ -1.48
ABCA3Q99758 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC5.82□□□□□ -1.48
ABCA3Q99758 UBE2V1P3-201ENST00000439651 417 ntBASIC5.82□□□□□ -1.48
ABCA3Q99758 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
ABCA3Q99758 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC5.82□□□□□ -1.48
ABCA3Q99758 AC110768.1-201ENST00000509222 400 ntBASIC5.82□□□□□ -1.48
ABCA3Q99758 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC5.82□□□□□ -1.48
ABCA3Q99758 AL160281.1-201ENST00000605307 311 ntBASIC5.82□□□□□ -1.48
ABCA3Q99758 AC015908.5-201ENST00000623289 343 ntBASIC5.82□□□□□ -1.48
ABCA3Q99758 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
ABCA3Q99758 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
ABCA3Q99758 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
ABCA3Q99758 ADAM5-202ENST00000399789 1942 ntBASIC5.82□□□□□ -1.48
ABCA3Q99758 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
ABCA3Q99758 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
ABCA3Q99758 AC092162.3-201ENST00000624511 1624 ntBASIC5.81□□□□□ -1.48
ABCA3Q99758 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
ABCA3Q99758 EI24P3-201ENST00000399046 1062 ntBASIC5.81□□□□□ -1.48
ABCA3Q99758 AMMECR1LP1-201ENST00000415152 841 ntBASIC5.81□□□□□ -1.48
ABCA3Q99758 AC079809.1-201ENST00000415468 276 ntBASIC5.81□□□□□ -1.48
ABCA3Q99758 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
ABCA3Q99758 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
ABCA3Q99758 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC5.81□□□□□ -1.48
ABCA3Q99758 FTH1P25-201ENST00000447665 469 ntBASIC5.81□□□□□ -1.48
ABCA3Q99758 AL049874.2-201ENST00000492636 288 ntBASIC5.81□□□□□ -1.48
ABCA3Q99758 OR5D2P-201ENST00000524390 911 ntBASIC5.81□□□□□ -1.48
ABCA3Q99758 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC5.81□□□□□ -1.48
ABCA3Q99758 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC5.81□□□□□ -1.48
ABCA3Q99758 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC5.81□□□□□ -1.48
ABCA3Q99758 AC015967.1-201ENST00000619893 476 ntBASIC5.81□□□□□ -1.48
ABCA3Q99758 AL357559.1-201ENST00000622228 274 ntBASIC5.81□□□□□ -1.48
ABCA3Q99758 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.81□□□□□ -1.48
ABCA3Q99758 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
ABCA3Q99758 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.81□□□□□ -1.48
ABCA3Q99758 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC5.81□□□□□ -1.48
ABCA3Q99758 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
ABCA3Q99758 AC007529.1-201ENST00000418574 2178 ntBASIC5.81□□□□□ -1.48
ABCA3Q99758 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
ABCA3Q99758 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
ABCA3Q99758 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
ABCA3Q99758 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
ABCA3Q99758 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
ABCA3Q99758 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
ABCA3Q99758 AL353748.1-201ENST00000440753 474 ntBASIC5.8□□□□□ -1.48
ABCA3Q99758 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC5.8□□□□□ -1.48
ABCA3Q99758 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC5.8□□□□□ -1.48
ABCA3Q99758 BTF3P6-201ENST00000448054 499 ntBASIC5.8□□□□□ -1.48
ABCA3Q99758 RPL5P12-201ENST00000477071 851 ntBASIC5.8□□□□□ -1.48
ABCA3Q99758 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.8□□□□□ -1.48
ABCA3Q99758 MIR3944-201ENST00000581277 108 ntBASIC5.8□□□□□ -1.48
ABCA3Q99758 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC5.8□□□□□ -1.48
ABCA3Q99758 AL451086.1-201ENST00000605596 223 ntBASIC5.8□□□□□ -1.48
ABCA3Q99758 MIR6500-201ENST00000622700 86 ntBASIC5.8□□□□□ -1.48
ABCA3Q99758 CR392039.5-201ENST00000623201 510 ntBASIC5.8□□□□□ -1.48
ABCA3Q99758 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5.8□□□□□ -1.48
ABCA3Q99758 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
ABCA3Q99758 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.8□□□□□ -1.48
ABCA3Q99758 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC5.8□□□□□ -1.48
ABCA3Q99758 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
ABCA3Q99758 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
ABCA3Q99758 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.8□□□□□ -1.48
ABCA3Q99758 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
ABCA3Q99758 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
ABCA3Q99758 AC233968.1-201ENST00000611212 1300 ntBASIC5.8□□□□□ -1.48
ABCA3Q99758 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
ABCA3Q99758 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
ABCA3Q99758 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
ABCA3Q99758 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
ABCA3Q99758 AL137141.1-201ENST00000624622 4836 ntBASIC5.79□□□□□ -1.48
ABCA3Q99758 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
ABCA3Q99758 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
ABCA3Q99758 OR11H4-201ENST00000315409 1082 ntBASIC5.79□□□□□ -1.48
ABCA3Q99758 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.79□□□□□ -1.48
ABCA3Q99758 AC104333.2-201ENST00000422630 192 ntBASIC5.79□□□□□ -1.48
ABCA3Q99758 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC5.79□□□□□ -1.48
ABCA3Q99758 NOTCH2P1-201ENST00000443481 624 ntBASIC5.79□□□□□ -1.48
ABCA3Q99758 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC5.79□□□□□ -1.48
ABCA3Q99758 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.79□□□□□ -1.48
ABCA3Q99758 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC5.79□□□□□ -1.48
ABCA3Q99758 AF213884.1-201ENST00000488102 463 ntBASIC5.79□□□□□ -1.48
ABCA3Q99758 RNU6-352P-201ENST00000516908 107 ntBASIC5.79□□□□□ -1.48
ABCA3Q99758 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC5.79□□□□□ -1.48
ABCA3Q99758 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.79□□□□□ -1.48
ABCA3Q99758 AC007179.3-201ENST00000604976 235 ntBASIC5.79□□□□□ -1.48
ABCA3Q99758 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
ABCA3Q99758 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
ABCA3Q99758 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC5.79□□□□□ -1.48
ABCA3Q99758 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
ABCA3Q99758 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
ABCA3Q99758 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC5.79□□□□□ -1.48
ABCA3Q99758 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
ABCA3Q99758 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
ABCA3Q99758 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
ABCA3Q99758 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
ABCA3Q99758 U8.11-201ENST00000384699 133 ntBASIC5.79□□□□□ -1.48
ABCA3Q99758 U8.12-201ENST00000384701 133 ntBASIC5.79□□□□□ -1.48
ABCA3Q99758 AC068533.1-201ENST00000418542 415 ntBASIC5.79□□□□□ -1.48
ABCA3Q99758 ARAFP1-201ENST00000422172 605 ntBASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms