Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CDK5RAP1Q96SZ6 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.87□□□□□ -1.47
CDK5RAP1Q96SZ6 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.87□□□□□ -1.47
CDK5RAP1Q96SZ6 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
CDK5RAP1Q96SZ6 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CDK5RAP1Q96SZ6 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
CDK5RAP1Q96SZ6 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.87□□□□□ -1.47
CDK5RAP1Q96SZ6 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CDK5RAP1Q96SZ6 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.87□□□□□ -1.47
CDK5RAP1Q96SZ6 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.87□□□□□ -1.47
CDK5RAP1Q96SZ6 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CDK5RAP1Q96SZ6 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.86□□□□□ -1.47
CDK5RAP1Q96SZ6 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
CDK5RAP1Q96SZ6 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.86□□□□□ -1.47
CDK5RAP1Q96SZ6 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.86□□□□□ -1.47
CDK5RAP1Q96SZ6 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
CDK5RAP1Q96SZ6 AC097063.1-201ENST00000426714 1797 ntBASIC5.86□□□□□ -1.47
CDK5RAP1Q96SZ6 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
CDK5RAP1Q96SZ6 CR381670.1-201ENST00000624291 1693 ntBASIC5.86□□□□□ -1.47
CDK5RAP1Q96SZ6 UGT2B24P-201ENST00000514441 1597 ntBASIC5.86□□□□□ -1.47
CDK5RAP1Q96SZ6 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CDK5RAP1Q96SZ6 MTCO1P11-201ENST00000429111 1528 ntBASIC5.86□□□□□ -1.47
CDK5RAP1Q96SZ6 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC5.86□□□□□ -1.47
CDK5RAP1Q96SZ6 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.86□□□□□ -1.47
CDK5RAP1Q96SZ6 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.86□□□□□ -1.47
CDK5RAP1Q96SZ6 RNA5SP319-201ENST00000362768 119 ntBASIC5.86□□□□□ -1.47
CDK5RAP1Q96SZ6 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
CDK5RAP1Q96SZ6 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CDK5RAP1Q96SZ6 OR8G2P-201ENST00000412796 908 ntBASIC5.86□□□□□ -1.47
CDK5RAP1Q96SZ6 METTL15P3-201ENST00000415522 1221 ntBASIC5.86□□□□□ -1.47
CDK5RAP1Q96SZ6 AC079355.1-201ENST00000421770 223 ntBASIC5.86□□□□□ -1.47
CDK5RAP1Q96SZ6 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.86□□□□□ -1.47
CDK5RAP1Q96SZ6 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.86□□□□□ -1.47
CDK5RAP1Q96SZ6 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC5.86□□□□□ -1.47
CDK5RAP1Q96SZ6 AC000041.1-201ENST00000439655 175 ntBASIC5.86□□□□□ -1.47
CDK5RAP1Q96SZ6 SPRYD7P1-201ENST00000443861 570 ntBASIC5.86□□□□□ -1.47
CDK5RAP1Q96SZ6 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.86□□□□□ -1.47
CDK5RAP1Q96SZ6 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.86□□□□□ -1.47
CDK5RAP1Q96SZ6 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.86□□□□□ -1.47
CDK5RAP1Q96SZ6 RN7SL583P-201ENST00000475692 287 ntBASIC5.86□□□□□ -1.47
CDK5RAP1Q96SZ6 AC008410.1-201ENST00000483777 339 ntBASIC5.86□□□□□ -1.47
CDK5RAP1Q96SZ6 AC004815.1-201ENST00000484185 331 ntBASIC5.86□□□□□ -1.47
CDK5RAP1Q96SZ6 RPS27AP16-201ENST00000492222 470 ntBASIC5.86□□□□□ -1.47
CDK5RAP1Q96SZ6 AC116353.2-201ENST00000505332 712 ntBASIC5.86□□□□□ -1.47
CDK5RAP1Q96SZ6 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.86□□□□□ -1.47
CDK5RAP1Q96SZ6 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.86□□□□□ -1.47
CDK5RAP1Q96SZ6 GTF2F2P1-201ENST00000511083 675 ntBASIC5.86□□□□□ -1.47
CDK5RAP1Q96SZ6 RNA5SP362-201ENST00000516048 118 ntBASIC5.86□□□□□ -1.47
CDK5RAP1Q96SZ6 RNU6-1028P-201ENST00000517164 93 ntBASIC5.86□□□□□ -1.47
CDK5RAP1Q96SZ6 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.86□□□□□ -1.47
CDK5RAP1Q96SZ6 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC5.86□□□□□ -1.47
CDK5RAP1Q96SZ6 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CDK5RAP1Q96SZ6 OR8G3P-201ENST00000533406 921 ntBASIC5.86□□□□□ -1.47
CDK5RAP1Q96SZ6 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC5.86□□□□□ -1.47
CDK5RAP1Q96SZ6 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CDK5RAP1Q96SZ6 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC5.86□□□□□ -1.47
CDK5RAP1Q96SZ6 AC060780.2-201ENST00000589047 198 ntBASIC5.86□□□□□ -1.47
CDK5RAP1Q96SZ6 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.86□□□□□ -1.47
CDK5RAP1Q96SZ6 AC092653.1-201ENST00000608509 531 ntBASIC5.86□□□□□ -1.47
CDK5RAP1Q96SZ6 AC090617.9-201ENST00000623751 147 ntBASIC5.86□□□□□ -1.47
CDK5RAP1Q96SZ6 AC073869.7-201ENST00000640874 297 ntBASIC5.86□□□□□ -1.47
CDK5RAP1Q96SZ6 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CDK5RAP1Q96SZ6 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CDK5RAP1Q96SZ6 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CDK5RAP1Q96SZ6 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CDK5RAP1Q96SZ6 PWAR1-201ENST00000624188 2414 ntBASIC5.86□□□□□ -1.47
CDK5RAP1Q96SZ6 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
CDK5RAP1Q96SZ6 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.86□□□□□ -1.47
CDK5RAP1Q96SZ6 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
CDK5RAP1Q96SZ6 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.85□□□□□ -1.47
CDK5RAP1Q96SZ6 MTND5P24-201ENST00000438892 1767 ntBASIC5.85□□□□□ -1.47
CDK5RAP1Q96SZ6 AL138820.1-201ENST00000617901 5305 ntBASIC5.85□□□□□ -1.47
CDK5RAP1Q96SZ6 AC087565.3-202ENST00000642085 1603 ntBASIC5.85□□□□□ -1.47
CDK5RAP1Q96SZ6 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
CDK5RAP1Q96SZ6 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CDK5RAP1Q96SZ6 AC004520.1-201ENST00000608362 1413 ntBASIC5.85□□□□□ -1.47
CDK5RAP1Q96SZ6 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CDK5RAP1Q96SZ6 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CDK5RAP1Q96SZ6 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CDK5RAP1Q96SZ6 RN7SKP160-201ENST00000363804 340 ntBASIC5.85□□□□□ -1.47
CDK5RAP1Q96SZ6 MCTS2P-201ENST00000394552 546 ntBASIC5.85□□□□□ -1.47
CDK5RAP1Q96SZ6 RSL24D1P4-201ENST00000400938 484 ntBASIC5.85□□□□□ -1.47
CDK5RAP1Q96SZ6 AL009179.1-201ENST00000406085 265 ntBASIC5.85□□□□□ -1.47
CDK5RAP1Q96SZ6 MTND1P21-201ENST00000412991 285 ntBASIC5.85□□□□□ -1.47
CDK5RAP1Q96SZ6 AL158825.1-201ENST00000414735 521 ntBASIC5.85□□□□□ -1.47
CDK5RAP1Q96SZ6 Z93019.1-201ENST00000416450 973 ntBASIC5.85□□□□□ -1.47
CDK5RAP1Q96SZ6 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.85□□□□□ -1.47
CDK5RAP1Q96SZ6 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC5.85□□□□□ -1.47
CDK5RAP1Q96SZ6 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC5.85□□□□□ -1.47
CDK5RAP1Q96SZ6 PRUNEP1-201ENST00000425846 705 ntBASIC5.85□□□□□ -1.47
CDK5RAP1Q96SZ6 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CDK5RAP1Q96SZ6 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC5.85□□□□□ -1.47
CDK5RAP1Q96SZ6 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC5.85□□□□□ -1.47
CDK5RAP1Q96SZ6 RNF148-202ENST00000447240 839 ntTSL 2 BASIC5.85□□□□□ -1.47
CDK5RAP1Q96SZ6 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CDK5RAP1Q96SZ6 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC5.85□□□□□ -1.47
CDK5RAP1Q96SZ6 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.85□□□□□ -1.47
CDK5RAP1Q96SZ6 RPS4XP6-201ENST00000477670 797 ntBASIC5.85□□□□□ -1.47
CDK5RAP1Q96SZ6 AC091544.1-201ENST00000484702 348 ntBASIC5.85□□□□□ -1.47
CDK5RAP1Q96SZ6 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 141.7 ms