Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PDLIM5Q96HC4 EIF4HP2-201ENST00000424380 563 ntBASIC4.82□□□□□ -1.64
PDLIM5Q96HC4 AC012519.1-201ENST00000424588 610 ntBASIC4.82□□□□□ -1.64
PDLIM5Q96HC4 CKS1BP6-201ENST00000424932 240 ntBASIC4.82□□□□□ -1.64
PDLIM5Q96HC4 MTATP6P11-201ENST00000428071 670 ntBASIC4.82□□□□□ -1.64
PDLIM5Q96HC4 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC4.82□□□□□ -1.64
PDLIM5Q96HC4 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.82□□□□□ -1.64
PDLIM5Q96HC4 MTND4LP7-201ENST00000431728 294 ntBASIC4.82□□□□□ -1.64
PDLIM5Q96HC4 RHOT1P3-201ENST00000436571 331 ntBASIC4.82□□□□□ -1.64
PDLIM5Q96HC4 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC4.82□□□□□ -1.64
PDLIM5Q96HC4 AC000111.2-201ENST00000448200 210 ntBASIC4.82□□□□□ -1.64
PDLIM5Q96HC4 AURKAPS1-201ENST00000451805 1212 ntBASIC4.82□□□□□ -1.64
PDLIM5Q96HC4 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.82□□□□□ -1.64
PDLIM5Q96HC4 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PDLIM5Q96HC4 RPS18P6-201ENST00000476880 458 ntBASIC4.82□□□□□ -1.64
PDLIM5Q96HC4 AC090686.1-201ENST00000481577 749 ntBASIC4.82□□□□□ -1.64
PDLIM5Q96HC4 AC109462.1-201ENST00000491087 368 ntBASIC4.82□□□□□ -1.64
PDLIM5Q96HC4 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.82□□□□□ -1.64
PDLIM5Q96HC4 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC4.82□□□□□ -1.64
PDLIM5Q96HC4 RNA5SP92-201ENST00000516437 110 ntBASIC4.82□□□□□ -1.64
PDLIM5Q96HC4 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.82□□□□□ -1.64
PDLIM5Q96HC4 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
PDLIM5Q96HC4 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
PDLIM5Q96HC4 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.82□□□□□ -1.64
PDLIM5Q96HC4 AC068446.3-201ENST00000555285 382 ntBASIC4.82□□□□□ -1.64
PDLIM5Q96HC4 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.82□□□□□ -1.64
PDLIM5Q96HC4 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.82□□□□□ -1.64
PDLIM5Q96HC4 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC4.82□□□□□ -1.64
PDLIM5Q96HC4 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC4.82□□□□□ -1.64
PDLIM5Q96HC4 DPRXP4-201ENST00000578053 568 ntBASIC4.82□□□□□ -1.64
PDLIM5Q96HC4 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.82□□□□□ -1.64
PDLIM5Q96HC4 AC010424.2-201ENST00000607594 443 ntBASIC4.82□□□□□ -1.64
PDLIM5Q96HC4 AP001521.2-201ENST00000608772 546 ntBASIC4.82□□□□□ -1.64
PDLIM5Q96HC4 AC009318.3-201ENST00000616916 503 ntBASIC4.82□□□□□ -1.64
PDLIM5Q96HC4 AC020923.1-201ENST00000624021 917 ntBASIC4.82□□□□□ -1.64
PDLIM5Q96HC4 CR381572.2-201ENST00000624852 397 ntBASIC4.82□□□□□ -1.64
PDLIM5Q96HC4 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
PDLIM5Q96HC4 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.82□□□□□ -1.64
PDLIM5Q96HC4 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
PDLIM5Q96HC4 AC093591.2-201ENST00000565254 3843 ntBASIC4.82□□□□□ -1.64
PDLIM5Q96HC4 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
PDLIM5Q96HC4 CASC19-206ENST00000641028 1430 ntBASIC4.81□□□□□ -1.64
PDLIM5Q96HC4 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.81□□□□□ -1.64
PDLIM5Q96HC4 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PDLIM5Q96HC4 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PDLIM5Q96HC4 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PDLIM5Q96HC4 U8.4-201ENST00000363626 134 ntBASIC4.81□□□□□ -1.64
PDLIM5Q96HC4 RNA5SP455-201ENST00000365190 119 ntBASIC4.81□□□□□ -1.64
PDLIM5Q96HC4 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
PDLIM5Q96HC4 GJA6P-201ENST00000415117 1042 ntBASIC4.81□□□□□ -1.64
PDLIM5Q96HC4 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.81□□□□□ -1.64
PDLIM5Q96HC4 BMS1P13-201ENST00000417301 885 ntBASIC4.81□□□□□ -1.64
PDLIM5Q96HC4 AF186996.5-201ENST00000418098 904 ntBASIC4.81□□□□□ -1.64
PDLIM5Q96HC4 AL355433.1-201ENST00000422804 300 ntBASIC4.81□□□□□ -1.64
PDLIM5Q96HC4 MTND2P11-201ENST00000423638 648 ntBASIC4.81□□□□□ -1.64
PDLIM5Q96HC4 MTND4P24-201ENST00000424002 397 ntBASIC4.81□□□□□ -1.64
PDLIM5Q96HC4 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PDLIM5Q96HC4 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.81□□□□□ -1.64
PDLIM5Q96HC4 PPIAP13-201ENST00000434706 478 ntBASIC4.81□□□□□ -1.64
PDLIM5Q96HC4 CBX1P4-201ENST00000439415 457 ntBASIC4.81□□□□□ -1.64
PDLIM5Q96HC4 AL137845.2-201ENST00000444292 988 ntBASIC4.81□□□□□ -1.64
PDLIM5Q96HC4 AL163193.1-201ENST00000444895 788 ntBASIC4.81□□□□□ -1.64
PDLIM5Q96HC4 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.81□□□□□ -1.64
PDLIM5Q96HC4 AC006326.1-201ENST00000445465 787 ntBASIC4.81□□□□□ -1.64
PDLIM5Q96HC4 TPMTP4-201ENST00000450749 678 ntBASIC4.81□□□□□ -1.64
PDLIM5Q96HC4 RN7SL319P-201ENST00000480656 221 ntBASIC4.81□□□□□ -1.64
PDLIM5Q96HC4 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.81□□□□□ -1.64
PDLIM5Q96HC4 AC004980.4-201ENST00000513375 203 ntBASIC4.81□□□□□ -1.64
PDLIM5Q96HC4 RNA5SP464-201ENST00000516251 108 ntBASIC4.81□□□□□ -1.64
PDLIM5Q96HC4 RNA5SP34-201ENST00000516887 130 ntBASIC4.81□□□□□ -1.64
PDLIM5Q96HC4 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.81□□□□□ -1.64
PDLIM5Q96HC4 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC4.81□□□□□ -1.64
PDLIM5Q96HC4 HAUS8P1-201ENST00000549005 542 ntBASIC4.81□□□□□ -1.64
PDLIM5Q96HC4 AL109741.3-201ENST00000561748 592 ntBASIC4.81□□□□□ -1.64
PDLIM5Q96HC4 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC4.81□□□□□ -1.64
PDLIM5Q96HC4 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.81□□□□□ -1.64
PDLIM5Q96HC4 CBX3P2-202ENST00000583365 535 ntBASIC4.81□□□□□ -1.64
PDLIM5Q96HC4 AC110743.1-201ENST00000584870 478 ntBASIC4.81□□□□□ -1.64
PDLIM5Q96HC4 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.81□□□□□ -1.64
PDLIM5Q96HC4 MEMO1P5-201ENST00000604810 406 ntBASIC4.81□□□□□ -1.64
PDLIM5Q96HC4 AL355816.1-201ENST00000607951 118 ntBASIC4.81□□□□□ -1.64
PDLIM5Q96HC4 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC4.81□□□□□ -1.64
PDLIM5Q96HC4 AC009163.6-201ENST00000612367 342 ntBASIC4.81□□□□□ -1.64
PDLIM5Q96HC4 AC243654.2-201ENST00000612843 443 ntBASIC4.81□□□□□ -1.64
PDLIM5Q96HC4 MIR8069-1-201ENST00000616627 86 ntBASIC4.81□□□□□ -1.64
PDLIM5Q96HC4 MIR6886-201ENST00000619864 61 ntBASIC4.81□□□□□ -1.64
PDLIM5Q96HC4 MIR8069-2-201ENST00000621412 86 ntBASIC4.81□□□□□ -1.64
PDLIM5Q96HC4 AC024023.1-201ENST00000624530 922 ntBASIC4.81□□□□□ -1.64
PDLIM5Q96HC4 AC116563.2-201ENST00000624751 535 ntBASIC4.81□□□□□ -1.64
PDLIM5Q96HC4 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.81□□□□□ -1.64
PDLIM5Q96HC4 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PDLIM5Q96HC4 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
PDLIM5Q96HC4 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.81□□□□□ -1.64
PDLIM5Q96HC4 MTCO1P11-201ENST00000429111 1528 ntBASIC4.81□□□□□ -1.64
PDLIM5Q96HC4 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PDLIM5Q96HC4 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.81□□□□□ -1.64
PDLIM5Q96HC4 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.81□□□□□ -1.64
PDLIM5Q96HC4 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.81□□□□□ -1.64
PDLIM5Q96HC4 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
PDLIM5Q96HC4 CYP1D1P-201ENST00000416662 1433 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 185.9 ms