Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
ALMS1Q8TCU4 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC3.04□□□□□ -1.92
ALMS1Q8TCU4 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.04□□□□□ -1.92
ALMS1Q8TCU4 AC012442.3-202ENST00000636742 206 ntBASIC3.04□□□□□ -1.92
ALMS1Q8TCU4 AP001157.1-201ENST00000550837 2339 ntBASIC3.04□□□□□ -1.92
ALMS1Q8TCU4 AC135352.1-201ENST00000506173 1418 ntBASIC3.04□□□□□ -1.92
ALMS1Q8TCU4 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC3.04□□□□□ -1.92
ALMS1Q8TCU4 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
ALMS1Q8TCU4 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
ALMS1Q8TCU4 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
ALMS1Q8TCU4 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
ALMS1Q8TCU4 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
ALMS1Q8TCU4 AL035079.1-201ENST00000405210 287 ntBASIC3.04□□□□□ -1.92
ALMS1Q8TCU4 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC3.04□□□□□ -1.92
ALMS1Q8TCU4 MFSD13B-201ENST00000420133 1290 ntBASIC3.04□□□□□ -1.92
ALMS1Q8TCU4 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC3.04□□□□□ -1.92
ALMS1Q8TCU4 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.04□□□□□ -1.92
ALMS1Q8TCU4 AC105137.1-201ENST00000484355 562 ntBASIC3.04□□□□□ -1.92
ALMS1Q8TCU4 MEG8-217ENST00000556637 924 ntTSL 5 BASIC3.04□□□□□ -1.92
ALMS1Q8TCU4 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC3.04□□□□□ -1.92
ALMS1Q8TCU4 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC3.04□□□□□ -1.92
ALMS1Q8TCU4 MIR3944-201ENST00000581277 108 ntBASIC3.04□□□□□ -1.92
ALMS1Q8TCU4 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC3.04□□□□□ -1.92
ALMS1Q8TCU4 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
ALMS1Q8TCU4 AC000374.1-201ENST00000434698 1745 ntBASIC3.04□□□□□ -1.92
ALMS1Q8TCU4 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
ALMS1Q8TCU4 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
ALMS1Q8TCU4 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC3.04□□□□□ -1.92
ALMS1Q8TCU4 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
ALMS1Q8TCU4 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
ALMS1Q8TCU4 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC3.04□□□□□ -1.92
ALMS1Q8TCU4 MAPK10-286ENST00000641208 8747 ntBASIC3.04□□□□□ -1.92
ALMS1Q8TCU4 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.04□□□□□ -1.92
ALMS1Q8TCU4 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC3.04□□□□□ -1.92
ALMS1Q8TCU4 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC3.04□□□□□ -1.92
ALMS1Q8TCU4 AC016772.1-201ENST00000444170 1261 ntBASIC3.04□□□□□ -1.92
ALMS1Q8TCU4 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.04□□□□□ -1.92
ALMS1Q8TCU4 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC3.04□□□□□ -1.92
ALMS1Q8TCU4 RPS7P7-201ENST00000463499 571 ntBASIC3.04□□□□□ -1.92
ALMS1Q8TCU4 RNA5SP519-201ENST00000516480 119 ntBASIC3.04□□□□□ -1.92
ALMS1Q8TCU4 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC3.04□□□□□ -1.92
ALMS1Q8TCU4 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC3.04□□□□□ -1.92
ALMS1Q8TCU4 VN1R92P-201ENST00000598511 928 ntBASIC3.04□□□□□ -1.92
ALMS1Q8TCU4 AL353600.1-201ENST00000608148 251 ntBASIC3.04□□□□□ -1.92
ALMS1Q8TCU4 PTMAP5-201ENST00000393073 333 ntBASIC3.03□□□□□ -1.92
ALMS1Q8TCU4 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC3.03□□□□□ -1.92
ALMS1Q8TCU4 RN7SL197P-201ENST00000466981 299 ntBASIC3.03□□□□□ -1.92
ALMS1Q8TCU4 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC3.03□□□□□ -1.92
ALMS1Q8TCU4 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC3.03□□□□□ -1.92
ALMS1Q8TCU4 AC053481.4-201ENST00000583164 216 ntBASIC3.03□□□□□ -1.92
ALMS1Q8TCU4 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.03□□□□□ -1.92
ALMS1Q8TCU4 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC3.03□□□□□ -1.92
ALMS1Q8TCU4 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC3.03□□□□□ -1.92
ALMS1Q8TCU4 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
ALMS1Q8TCU4 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
ALMS1Q8TCU4 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC3.03□□□□□ -1.92
ALMS1Q8TCU4 DNAJC6-201ENST00000263441 5916 ntAPPRIS ALT2 TSL 2 BASIC3.03□□□□□ -1.92
ALMS1Q8TCU4 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC3.03□□□□□ -1.92
ALMS1Q8TCU4 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
ALMS1Q8TCU4 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
ALMS1Q8TCU4 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
ALMS1Q8TCU4 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC3.03□□□□□ -1.92
ALMS1Q8TCU4 AC022336.1-201ENST00000475510 337 ntBASIC3.03□□□□□ -1.92
ALMS1Q8TCU4 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC3.03□□□□□ -1.92
ALMS1Q8TCU4 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
ALMS1Q8TCU4 Y_RNA.719-201ENST00000517156 106 ntBASIC3.03□□□□□ -1.92
ALMS1Q8TCU4 TVP23BP1-201ENST00000557500 617 ntBASIC3.03□□□□□ -1.92
ALMS1Q8TCU4 RN7SL600P-201ENST00000581811 299 ntBASIC3.03□□□□□ -1.92
ALMS1Q8TCU4 AC096577.2-201ENST00000611455 153 ntBASIC3.03□□□□□ -1.92
ALMS1Q8TCU4 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
ALMS1Q8TCU4 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
ALMS1Q8TCU4 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC3.03□□□□□ -1.92
ALMS1Q8TCU4 AC008549.2-201ENST00000333482 706 ntBASIC3.03□□□□□ -1.92
ALMS1Q8TCU4 EI24P3-201ENST00000399046 1062 ntBASIC3.03□□□□□ -1.92
ALMS1Q8TCU4 AC104651.2-201ENST00000447549 528 ntBASIC3.03□□□□□ -1.92
ALMS1Q8TCU4 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC3.03□□□□□ -1.92
ALMS1Q8TCU4 FTH1P11-201ENST00000517577 551 ntBASIC3.03□□□□□ -1.92
ALMS1Q8TCU4 AC005868.1-201ENST00000536421 331 ntBASIC3.03□□□□□ -1.92
ALMS1Q8TCU4 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
ALMS1Q8TCU4 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.93
ALMS1Q8TCU4 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.93
ALMS1Q8TCU4 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC3.03□□□□□ -1.93
ALMS1Q8TCU4 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.03□□□□□ -1.93
ALMS1Q8TCU4 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC3.03□□□□□ -1.93
ALMS1Q8TCU4 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
ALMS1Q8TCU4 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
ALMS1Q8TCU4 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
ALMS1Q8TCU4 DMD-202ENST00000343523 5623 ntTSL 5 BASIC3.02□□□□□ -1.93
ALMS1Q8TCU4 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
ALMS1Q8TCU4 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
ALMS1Q8TCU4 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.02□□□□□ -1.93
ALMS1Q8TCU4 EIF4A1P3-201ENST00000411521 244 ntBASIC3.02□□□□□ -1.93
ALMS1Q8TCU4 GNG5P5-201ENST00000420444 220 ntBASIC3.02□□□□□ -1.93
ALMS1Q8TCU4 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.02□□□□□ -1.93
ALMS1Q8TCU4 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC3.02□□□□□ -1.93
ALMS1Q8TCU4 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.02□□□□□ -1.93
ALMS1Q8TCU4 ISCUP1-201ENST00000454451 448 ntBASIC3.02□□□□□ -1.93
ALMS1Q8TCU4 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC3.02□□□□□ -1.93
ALMS1Q8TCU4 RPL35P6-201ENST00000490024 372 ntBASIC3.02□□□□□ -1.93
ALMS1Q8TCU4 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms