Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
BEST3Q8N1M1 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.81□□□□□ -1.64
BEST3Q8N1M1 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC4.81□□□□□ -1.64
BEST3Q8N1M1 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
BEST3Q8N1M1 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
BEST3Q8N1M1 VPS35P1-201ENST00000563400 1518 ntBASIC4.81□□□□□ -1.64
BEST3Q8N1M1 AC073136.1-201ENST00000449426 2884 ntBASIC4.81□□□□□ -1.64
BEST3Q8N1M1 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
BEST3Q8N1M1 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
BEST3Q8N1M1 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.8□□□□□ -1.64
BEST3Q8N1M1 AL132640.2-201ENST00000559968 1698 ntBASIC4.8□□□□□ -1.64
BEST3Q8N1M1 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
BEST3Q8N1M1 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC4.8□□□□□ -1.64
BEST3Q8N1M1 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
BEST3Q8N1M1 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
BEST3Q8N1M1 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
BEST3Q8N1M1 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
BEST3Q8N1M1 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC4.8□□□□□ -1.64
BEST3Q8N1M1 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
BEST3Q8N1M1 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.8□□□□□ -1.64
BEST3Q8N1M1 RNU5E-10P-201ENST00000363506 118 ntBASIC4.8□□□□□ -1.64
BEST3Q8N1M1 RNA5SP90-201ENST00000364801 99 ntBASIC4.8□□□□□ -1.64
BEST3Q8N1M1 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
BEST3Q8N1M1 OR8V1P-201ENST00000395193 873 ntBASIC4.8□□□□□ -1.64
BEST3Q8N1M1 AL109941.1-201ENST00000401925 229 ntBASIC4.8□□□□□ -1.64
BEST3Q8N1M1 NUDT19P3-201ENST00000404698 555 ntBASIC4.8□□□□□ -1.64
BEST3Q8N1M1 MIR1182-201ENST00000408363 97 ntBASIC4.8□□□□□ -1.64
BEST3Q8N1M1 AL445213.1-201ENST00000412589 747 ntBASIC4.8□□□□□ -1.64
BEST3Q8N1M1 AC105402.1-201ENST00000413336 545 ntBASIC4.8□□□□□ -1.64
BEST3Q8N1M1 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.8□□□□□ -1.64
BEST3Q8N1M1 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC4.8□□□□□ -1.64
BEST3Q8N1M1 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC4.8□□□□□ -1.64
BEST3Q8N1M1 AC073310.1-201ENST00000423226 1033 ntBASIC4.8□□□□□ -1.64
BEST3Q8N1M1 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.8□□□□□ -1.64
BEST3Q8N1M1 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC4.8□□□□□ -1.64
BEST3Q8N1M1 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC4.8□□□□□ -1.64
BEST3Q8N1M1 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.8□□□□□ -1.64
BEST3Q8N1M1 AL096803.2-201ENST00000450032 677 ntBASIC4.8□□□□□ -1.64
BEST3Q8N1M1 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC4.8□□□□□ -1.64
BEST3Q8N1M1 snoU13.20-201ENST00000459180 104 ntBASIC4.8□□□□□ -1.64
BEST3Q8N1M1 AC104164.3-201ENST00000467363 1258 ntBASIC4.8□□□□□ -1.64
BEST3Q8N1M1 IGBP1P4-201ENST00000503202 879 ntBASIC4.8□□□□□ -1.64
BEST3Q8N1M1 UBE2V1P12-201ENST00000503954 474 ntBASIC4.8□□□□□ -1.64
BEST3Q8N1M1 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.8□□□□□ -1.64
BEST3Q8N1M1 AC021451.1-201ENST00000523498 1129 ntBASIC4.8□□□□□ -1.64
BEST3Q8N1M1 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC4.8□□□□□ -1.64
BEST3Q8N1M1 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC4.8□□□□□ -1.64
BEST3Q8N1M1 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.8□□□□□ -1.64
BEST3Q8N1M1 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.8□□□□□ -1.64
BEST3Q8N1M1 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC4.8□□□□□ -1.64
BEST3Q8N1M1 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC4.8□□□□□ -1.64
BEST3Q8N1M1 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC4.8□□□□□ -1.64
BEST3Q8N1M1 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.8□□□□□ -1.64
BEST3Q8N1M1 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.8□□□□□ -1.64
BEST3Q8N1M1 UBA2-208ENST00000592791 910 ntTSL 2 BASIC4.8□□□□□ -1.64
BEST3Q8N1M1 AL606834.3-201ENST00000602615 496 ntBASIC4.8□□□□□ -1.64
BEST3Q8N1M1 AL162431.4-201ENST00000604674 411 ntBASIC4.8□□□□□ -1.64
BEST3Q8N1M1 AC099785.1-201ENST00000605697 437 ntBASIC4.8□□□□□ -1.64
BEST3Q8N1M1 AL669942.2-201ENST00000620352 697 ntBASIC4.8□□□□□ -1.64
BEST3Q8N1M1 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC4.8□□□□□ -1.64
BEST3Q8N1M1 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.8□□□□□ -1.64
BEST3Q8N1M1 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC4.8□□□□□ -1.64
BEST3Q8N1M1 AL590396.4-201ENST00000636779 956 ntBASIC4.8□□□□□ -1.64
BEST3Q8N1M1 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC4.8□□□□□ -1.64
BEST3Q8N1M1 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.8□□□□□ -1.64
BEST3Q8N1M1 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
BEST3Q8N1M1 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
BEST3Q8N1M1 AC093849.1-201ENST00000563631 2209 ntBASIC4.8□□□□□ -1.64
BEST3Q8N1M1 MTCO1P18-201ENST00000455518 1419 ntBASIC4.8□□□□□ -1.64
BEST3Q8N1M1 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
BEST3Q8N1M1 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.79□□□□□ -1.64
BEST3Q8N1M1 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
BEST3Q8N1M1 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
BEST3Q8N1M1 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
BEST3Q8N1M1 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
BEST3Q8N1M1 THAP12P4-201ENST00000528321 2266 ntBASIC4.79□□□□□ -1.64
BEST3Q8N1M1 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
BEST3Q8N1M1 MTCO1P15-201ENST00000529569 1526 ntBASIC4.79□□□□□ -1.64
BEST3Q8N1M1 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.79□□□□□ -1.64
BEST3Q8N1M1 SCARNA15-201ENST00000607520 4325 ntBASIC4.79□□□□□ -1.64
BEST3Q8N1M1 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
BEST3Q8N1M1 RNU6-452P-201ENST00000384406 107 ntBASIC4.79□□□□□ -1.64
BEST3Q8N1M1 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
BEST3Q8N1M1 RNU6-298P-201ENST00000390888 96 ntBASIC4.79□□□□□ -1.64
BEST3Q8N1M1 MTCO2P8-201ENST00000412213 658 ntBASIC4.79□□□□□ -1.64
BEST3Q8N1M1 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.79□□□□□ -1.64
BEST3Q8N1M1 OR13Z1P-201ENST00000416141 834 ntBASIC4.79□□□□□ -1.64
BEST3Q8N1M1 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC4.79□□□□□ -1.64
BEST3Q8N1M1 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.79□□□□□ -1.64
BEST3Q8N1M1 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
BEST3Q8N1M1 AC124944.2-201ENST00000429866 1242 ntBASIC4.79□□□□□ -1.64
BEST3Q8N1M1 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC4.79□□□□□ -1.64
BEST3Q8N1M1 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
BEST3Q8N1M1 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.79□□□□□ -1.64
BEST3Q8N1M1 MED6P1-201ENST00000439659 713 ntBASIC4.79□□□□□ -1.64
BEST3Q8N1M1 DUXAP8-207ENST00000456786 622 ntBASIC4.79□□□□□ -1.64
BEST3Q8N1M1 RPS4XP12-201ENST00000461747 709 ntBASIC4.79□□□□□ -1.64
BEST3Q8N1M1 AC097484.1-201ENST00000471148 389 ntBASIC4.79□□□□□ -1.64
BEST3Q8N1M1 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC4.79□□□□□ -1.64
BEST3Q8N1M1 AP000797.2-201ENST00000475768 606 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms