Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
NUDCD3Q8IVD9 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.57□□□□□ -1.68
NUDCD3Q8IVD9 AC022431.1-201ENST00000450941 438 ntBASIC4.57□□□□□ -1.68
NUDCD3Q8IVD9 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.57□□□□□ -1.68
NUDCD3Q8IVD9 AC037198.2-201ENST00000478845 733 ntBASIC4.57□□□□□ -1.68
NUDCD3Q8IVD9 AC098799.3-201ENST00000506095 438 ntBASIC4.57□□□□□ -1.68
NUDCD3Q8IVD9 AC004980.4-201ENST00000513375 203 ntBASIC4.57□□□□□ -1.68
NUDCD3Q8IVD9 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC4.57□□□□□ -1.68
NUDCD3Q8IVD9 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.57□□□□□ -1.68
NUDCD3Q8IVD9 IGLV3-26-201ENST00000520756 302 ntBASIC4.57□□□□□ -1.68
NUDCD3Q8IVD9 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.57□□□□□ -1.68
NUDCD3Q8IVD9 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.57□□□□□ -1.68
NUDCD3Q8IVD9 AC004825.1-201ENST00000555068 586 ntBASIC4.57□□□□□ -1.68
NUDCD3Q8IVD9 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.57□□□□□ -1.68
NUDCD3Q8IVD9 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
NUDCD3Q8IVD9 AP005119.2-201ENST00000579735 1105 ntBASIC4.57□□□□□ -1.68
NUDCD3Q8IVD9 AC009303.3-201ENST00000591103 736 ntBASIC4.57□□□□□ -1.68
NUDCD3Q8IVD9 AP000864.1-201ENST00000609424 650 ntBASIC4.57□□□□□ -1.68
NUDCD3Q8IVD9 AC117490.2-201ENST00000610042 594 ntBASIC4.57□□□□□ -1.68
NUDCD3Q8IVD9 MIR6768-201ENST00000610734 72 ntBASIC4.57□□□□□ -1.68
NUDCD3Q8IVD9 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
NUDCD3Q8IVD9 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
NUDCD3Q8IVD9 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
NUDCD3Q8IVD9 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
NUDCD3Q8IVD9 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.57□□□□□ -1.68
NUDCD3Q8IVD9 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.57□□□□□ -1.68
NUDCD3Q8IVD9 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NUDCD3Q8IVD9 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.57□□□□□ -1.68
NUDCD3Q8IVD9 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
NUDCD3Q8IVD9 NCLP2-201ENST00000416078 1462 ntBASIC4.56□□□□□ -1.68
NUDCD3Q8IVD9 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
NUDCD3Q8IVD9 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.56□□□□□ -1.68
NUDCD3Q8IVD9 AL442639.1-201ENST00000625030 1899 ntBASIC4.56□□□□□ -1.68
NUDCD3Q8IVD9 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
NUDCD3Q8IVD9 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
NUDCD3Q8IVD9 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
NUDCD3Q8IVD9 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
NUDCD3Q8IVD9 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.56□□□□□ -1.68
NUDCD3Q8IVD9 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
NUDCD3Q8IVD9 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.56□□□□□ -1.68
NUDCD3Q8IVD9 MIR223-201ENST00000385204 110 ntBASIC4.56□□□□□ -1.68
NUDCD3Q8IVD9 RN7SKP167-201ENST00000411047 285 ntBASIC4.56□□□□□ -1.68
NUDCD3Q8IVD9 OR51B3P-201ENST00000412287 913 ntBASIC4.56□□□□□ -1.68
NUDCD3Q8IVD9 CASKP1-201ENST00000412870 582 ntBASIC4.56□□□□□ -1.68
NUDCD3Q8IVD9 AL591848.1-201ENST00000413092 322 ntBASIC4.56□□□□□ -1.68
NUDCD3Q8IVD9 CENPIP1-201ENST00000425713 902 ntBASIC4.56□□□□□ -1.68
NUDCD3Q8IVD9 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4.56□□□□□ -1.68
NUDCD3Q8IVD9 AL035551.1-201ENST00000446931 348 ntBASIC4.56□□□□□ -1.68
NUDCD3Q8IVD9 AC243772.1-201ENST00000451620 410 ntBASIC4.56□□□□□ -1.68
NUDCD3Q8IVD9 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.56□□□□□ -1.68
NUDCD3Q8IVD9 AC079841.1-201ENST00000481228 950 ntBASIC4.56□□□□□ -1.68
NUDCD3Q8IVD9 AC008897.1-201ENST00000494006 347 ntBASIC4.56□□□□□ -1.68
NUDCD3Q8IVD9 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
NUDCD3Q8IVD9 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC4.56□□□□□ -1.68
NUDCD3Q8IVD9 ATP5LP3-201ENST00000514223 304 ntBASIC4.56□□□□□ -1.68
NUDCD3Q8IVD9 AC008694.2-201ENST00000517591 306 ntBASIC4.56□□□□□ -1.68
NUDCD3Q8IVD9 NPM1P6-201ENST00000521088 871 ntBASIC4.56□□□□□ -1.68
NUDCD3Q8IVD9 MORF4L1P3-201ENST00000525966 950 ntBASIC4.56□□□□□ -1.68
NUDCD3Q8IVD9 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.56□□□□□ -1.68
NUDCD3Q8IVD9 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.56□□□□□ -1.68
NUDCD3Q8IVD9 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.56□□□□□ -1.68
NUDCD3Q8IVD9 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.56□□□□□ -1.68
NUDCD3Q8IVD9 AC007225.2-201ENST00000562529 256 ntBASIC4.56□□□□□ -1.68
NUDCD3Q8IVD9 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC4.56□□□□□ -1.68
NUDCD3Q8IVD9 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC4.56□□□□□ -1.68
NUDCD3Q8IVD9 EIF3FP1-201ENST00000613970 806 ntBASIC4.56□□□□□ -1.68
NUDCD3Q8IVD9 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
NUDCD3Q8IVD9 UOX-205ENST00000640983 544 ntTSL 4 BASIC4.56□□□□□ -1.68
NUDCD3Q8IVD9 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.56□□□□□ -1.68
NUDCD3Q8IVD9 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.56□□□□□ -1.68
NUDCD3Q8IVD9 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
NUDCD3Q8IVD9 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
NUDCD3Q8IVD9 AL391684.1-202ENST00000641293 1636 ntBASIC4.56□□□□□ -1.68
NUDCD3Q8IVD9 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.56□□□□□ -1.68
NUDCD3Q8IVD9 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
NUDCD3Q8IVD9 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
NUDCD3Q8IVD9 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
NUDCD3Q8IVD9 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
NUDCD3Q8IVD9 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
NUDCD3Q8IVD9 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
NUDCD3Q8IVD9 OR10J6P-201ENST00000289731 930 ntBASIC4.55□□□□□ -1.68
NUDCD3Q8IVD9 SNORA74A-201ENST00000364089 198 ntBASIC4.55□□□□□ -1.68
NUDCD3Q8IVD9 RNA5SP22-201ENST00000365393 109 ntBASIC4.55□□□□□ -1.68
NUDCD3Q8IVD9 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.55□□□□□ -1.68
NUDCD3Q8IVD9 AC009302.1-201ENST00000417147 390 ntBASIC4.55□□□□□ -1.68
NUDCD3Q8IVD9 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
NUDCD3Q8IVD9 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.55□□□□□ -1.68
NUDCD3Q8IVD9 AC010733.1-201ENST00000451515 401 ntBASIC4.55□□□□□ -1.68
NUDCD3Q8IVD9 AURKAPS1-201ENST00000451805 1212 ntBASIC4.55□□□□□ -1.68
NUDCD3Q8IVD9 RPS5P7-201ENST00000456664 608 ntBASIC4.55□□□□□ -1.68
NUDCD3Q8IVD9 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.55□□□□□ -1.68
NUDCD3Q8IVD9 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.55□□□□□ -1.68
NUDCD3Q8IVD9 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.55□□□□□ -1.68
NUDCD3Q8IVD9 PPBPP1-201ENST00000510807 373 ntBASIC4.55□□□□□ -1.68
NUDCD3Q8IVD9 AC008676.3-201ENST00000521237 435 ntBASIC4.55□□□□□ -1.68
NUDCD3Q8IVD9 OR10G5P-201ENST00000532733 358 ntBASIC4.55□□□□□ -1.68
NUDCD3Q8IVD9 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.55□□□□□ -1.68
NUDCD3Q8IVD9 AC005000.1-201ENST00000536192 288 ntBASIC4.55□□□□□ -1.68
NUDCD3Q8IVD9 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC4.55□□□□□ -1.68
NUDCD3Q8IVD9 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms