Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.82□□□□□ -1.64
NUP54Q7Z3B4 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC4.82□□□□□ -1.64
NUP54Q7Z3B4 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC4.82□□□□□ -1.64
NUP54Q7Z3B4 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC4.82□□□□□ -1.64
NUP54Q7Z3B4 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.82□□□□□ -1.64
NUP54Q7Z3B4 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.82□□□□□ -1.64
NUP54Q7Z3B4 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC4.82□□□□□ -1.64
NUP54Q7Z3B4 AP001033.2-201ENST00000609701 1003 ntBASIC4.82□□□□□ -1.64
NUP54Q7Z3B4 BNIP3P41-202ENST00000616656 861 ntBASIC4.82□□□□□ -1.64
NUP54Q7Z3B4 AC253576.2-201ENST00000618815 580 ntBASIC4.82□□□□□ -1.64
NUP54Q7Z3B4 AC024023.1-201ENST00000624530 922 ntBASIC4.82□□□□□ -1.64
NUP54Q7Z3B4 CR392039.4-201ENST00000624968 501 ntBASIC4.82□□□□□ -1.64
NUP54Q7Z3B4 FRG1DP-201ENST00000635586 771 ntBASIC4.82□□□□□ -1.64
NUP54Q7Z3B4 RNF6P1-201ENST00000444889 1784 ntBASIC4.82□□□□□ -1.64
NUP54Q7Z3B4 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
NUP54Q7Z3B4 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.82□□□□□ -1.64
NUP54Q7Z3B4 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
NUP54Q7Z3B4 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.82□□□□□ -1.64
NUP54Q7Z3B4 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
NUP54Q7Z3B4 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.81□□□□□ -1.64
NUP54Q7Z3B4 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
NUP54Q7Z3B4 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
NUP54Q7Z3B4 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
NUP54Q7Z3B4 AL133268.1-201ENST00000405676 1401 ntBASIC4.81□□□□□ -1.64
NUP54Q7Z3B4 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
NUP54Q7Z3B4 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NUP54Q7Z3B4 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NUP54Q7Z3B4 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
NUP54Q7Z3B4 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NUP54Q7Z3B4 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.81□□□□□ -1.64
NUP54Q7Z3B4 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
NUP54Q7Z3B4 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
NUP54Q7Z3B4 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
NUP54Q7Z3B4 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
NUP54Q7Z3B4 OR9K1P-201ENST00000326513 941 ntBASIC4.81□□□□□ -1.64
NUP54Q7Z3B4 U3.2-201ENST00000362981 210 ntBASIC4.81□□□□□ -1.64
NUP54Q7Z3B4 U3.3-201ENST00000362986 216 ntBASIC4.81□□□□□ -1.64
NUP54Q7Z3B4 RNU6-171P-201ENST00000384354 107 ntBASIC4.81□□□□□ -1.64
NUP54Q7Z3B4 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
NUP54Q7Z3B4 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.81□□□□□ -1.64
NUP54Q7Z3B4 BX510359.3-201ENST00000422168 306 ntBASIC4.81□□□□□ -1.64
NUP54Q7Z3B4 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC4.81□□□□□ -1.64
NUP54Q7Z3B4 AL139148.1-201ENST00000427122 680 ntBASIC4.81□□□□□ -1.64
NUP54Q7Z3B4 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.81□□□□□ -1.64
NUP54Q7Z3B4 AC092447.2-201ENST00000435487 669 ntBASIC4.81□□□□□ -1.64
NUP54Q7Z3B4 FAR2P1-206ENST00000449736 709 ntBASIC4.81□□□□□ -1.64
NUP54Q7Z3B4 RPL7P31-201ENST00000450192 724 ntBASIC4.81□□□□□ -1.64
NUP54Q7Z3B4 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC4.81□□□□□ -1.64
NUP54Q7Z3B4 AC093763.2-201ENST00000505334 1223 ntBASIC4.81□□□□□ -1.64
NUP54Q7Z3B4 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC4.81□□□□□ -1.64
NUP54Q7Z3B4 RNA5SP92-201ENST00000516437 110 ntBASIC4.81□□□□□ -1.64
NUP54Q7Z3B4 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NUP54Q7Z3B4 HAUS1P3-201ENST00000523909 662 ntBASIC4.81□□□□□ -1.64
NUP54Q7Z3B4 AC022832.1-201ENST00000530718 645 ntBASIC4.81□□□□□ -1.64
NUP54Q7Z3B4 OR10G5P-201ENST00000532733 358 ntBASIC4.81□□□□□ -1.64
NUP54Q7Z3B4 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.81□□□□□ -1.64
NUP54Q7Z3B4 HAUS8P1-201ENST00000549005 542 ntBASIC4.81□□□□□ -1.64
NUP54Q7Z3B4 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.81□□□□□ -1.64
NUP54Q7Z3B4 AC093510.2-201ENST00000562820 896 ntBASIC4.81□□□□□ -1.64
NUP54Q7Z3B4 AC106785.3-201ENST00000564064 847 ntBASIC4.81□□□□□ -1.64
NUP54Q7Z3B4 OR1F2P-201ENST00000570470 933 ntBASIC4.81□□□□□ -1.64
NUP54Q7Z3B4 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NUP54Q7Z3B4 RN7SL708P-201ENST00000580952 299 ntBASIC4.81□□□□□ -1.64
NUP54Q7Z3B4 AC011477.5-201ENST00000586571 259 ntBASIC4.81□□□□□ -1.64
NUP54Q7Z3B4 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
NUP54Q7Z3B4 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.81□□□□□ -1.64
NUP54Q7Z3B4 AC008814.1-201ENST00000603797 406 ntBASIC4.81□□□□□ -1.64
NUP54Q7Z3B4 SUMO2P14-201ENST00000604488 293 ntBASIC4.81□□□□□ -1.64
NUP54Q7Z3B4 AC011626.1-201ENST00000604710 562 ntBASIC4.81□□□□□ -1.64
NUP54Q7Z3B4 BNIP3P19-201ENST00000605397 577 ntBASIC4.81□□□□□ -1.64
NUP54Q7Z3B4 AP006248.2-201ENST00000623309 592 ntBASIC4.81□□□□□ -1.64
NUP54Q7Z3B4 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4.81□□□□□ -1.64
NUP54Q7Z3B4 AC092162.3-201ENST00000624511 1624 ntBASIC4.81□□□□□ -1.64
NUP54Q7Z3B4 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
NUP54Q7Z3B4 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.81□□□□□ -1.64
NUP54Q7Z3B4 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NUP54Q7Z3B4 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.81□□□□□ -1.64
NUP54Q7Z3B4 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
NUP54Q7Z3B4 AC006042.3-201ENST00000454684 1469 ntBASIC4.81□□□□□ -1.64
NUP54Q7Z3B4 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NUP54Q7Z3B4 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
NUP54Q7Z3B4 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
NUP54Q7Z3B4 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NUP54Q7Z3B4 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.8□□□□□ -1.64
NUP54Q7Z3B4 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.8□□□□□ -1.64
NUP54Q7Z3B4 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
NUP54Q7Z3B4 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NUP54Q7Z3B4 MTND4P31-201ENST00000425607 1343 ntBASIC4.8□□□□□ -1.64
NUP54Q7Z3B4 AC007529.1-201ENST00000418574 2178 ntBASIC4.8□□□□□ -1.64
NUP54Q7Z3B4 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NUP54Q7Z3B4 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
NUP54Q7Z3B4 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.8□□□□□ -1.64
NUP54Q7Z3B4 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
NUP54Q7Z3B4 NAP1L4P1-201ENST00000319092 1157 ntBASIC4.8□□□□□ -1.64
NUP54Q7Z3B4 RNU6-984P-201ENST00000363236 109 ntBASIC4.8□□□□□ -1.64
NUP54Q7Z3B4 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
NUP54Q7Z3B4 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.8□□□□□ -1.64
NUP54Q7Z3B4 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NUP54Q7Z3B4 MIR589-201ENST00000385238 99 ntBASIC4.8□□□□□ -1.64
NUP54Q7Z3B4 MIR1178-201ENST00000408396 91 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms