Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC6.64□□□□□ -1.35
RNF43Q68DV7 MIR548AB-201ENST00000584917 84 ntBASIC6.64□□□□□ -1.35
RNF43Q68DV7 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC6.64□□□□□ -1.35
RNF43Q68DV7 AL589863.1-201ENST00000595383 631 ntBASIC6.64□□□□□ -1.35
RNF43Q68DV7 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC6.64□□□□□ -1.35
RNF43Q68DV7 AC068790.7-201ENST00000602347 528 ntBASIC6.64□□□□□ -1.35
RNF43Q68DV7 AC012065.4-201ENST00000602445 679 ntBASIC6.64□□□□□ -1.35
RNF43Q68DV7 SEPT7P9-203ENST00000604116 343 ntBASIC6.64□□□□□ -1.35
RNF43Q68DV7 U1.25-201ENST00000614085 162 ntBASIC6.64□□□□□ -1.35
RNF43Q68DV7 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC6.64□□□□□ -1.35
RNF43Q68DV7 MIR6085-201ENST00000618314 110 ntBASIC6.64□□□□□ -1.35
RNF43Q68DV7 U1.34-201ENST00000618578 162 ntBASIC6.64□□□□□ -1.35
RNF43Q68DV7 AL158209.2-201ENST00000619266 216 ntBASIC6.64□□□□□ -1.35
RNF43Q68DV7 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
RNF43Q68DV7 U1.31-201ENST00000620022 160 ntBASIC6.64□□□□□ -1.35
RNF43Q68DV7 AP001264.1-201ENST00000620602 703 ntBASIC6.64□□□□□ -1.35
RNF43Q68DV7 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC6.64□□□□□ -1.35
RNF43Q68DV7 MTND4P27-201ENST00000450813 1354 ntBASIC6.64□□□□□ -1.35
RNF43Q68DV7 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC6.64□□□□□ -1.35
RNF43Q68DV7 Z99496.1-201ENST00000469424 1477 ntBASIC6.64□□□□□ -1.35
RNF43Q68DV7 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
RNF43Q68DV7 CASC19-228ENST00000641414 1684 ntBASIC6.64□□□□□ -1.35
RNF43Q68DV7 AP005901.5-201ENST00000545779 1796 ntBASIC6.64□□□□□ -1.35
RNF43Q68DV7 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
RNF43Q68DV7 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.64□□□□□ -1.35
RNF43Q68DV7 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
RNF43Q68DV7 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
RNF43Q68DV7 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.63□□□□□ -1.35
RNF43Q68DV7 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC6.63□□□□□ -1.35
RNF43Q68DV7 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
RNF43Q68DV7 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.63□□□□□ -1.35
RNF43Q68DV7 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.63□□□□□ -1.35
RNF43Q68DV7 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
RNF43Q68DV7 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
RNF43Q68DV7 RPL11P4-201ENST00000332269 436 ntBASIC6.63□□□□□ -1.35
RNF43Q68DV7 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
RNF43Q68DV7 RN7SKP69-201ENST00000365390 305 ntBASIC6.63□□□□□ -1.35
RNF43Q68DV7 Y_RNA.460-201ENST00000384255 102 ntBASIC6.63□□□□□ -1.35
RNF43Q68DV7 Y_RNA.529-201ENST00000384586 119 ntBASIC6.63□□□□□ -1.35
RNF43Q68DV7 RNU6-332P-201ENST00000391193 108 ntBASIC6.63□□□□□ -1.35
RNF43Q68DV7 AC093719.1-202ENST00000392735 373 ntBASIC6.63□□□□□ -1.35
RNF43Q68DV7 AC007068.1-201ENST00000396690 844 ntBASIC6.63□□□□□ -1.35
RNF43Q68DV7 AL023284.3-201ENST00000407767 334 ntBASIC6.63□□□□□ -1.35
RNF43Q68DV7 RN7SKP56-201ENST00000410513 331 ntBASIC6.63□□□□□ -1.35
RNF43Q68DV7 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC6.63□□□□□ -1.35
RNF43Q68DV7 NRBF2P2-201ENST00000413087 861 ntBASIC6.63□□□□□ -1.35
RNF43Q68DV7 VN1R36P-201ENST00000414936 291 ntBASIC6.63□□□□□ -1.35
RNF43Q68DV7 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
RNF43Q68DV7 LINC00993-201ENST00000420453 540 ntBASIC6.63□□□□□ -1.35
RNF43Q68DV7 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC6.63□□□□□ -1.35
RNF43Q68DV7 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC6.63□□□□□ -1.35
RNF43Q68DV7 RPSAP65-201ENST00000429660 595 ntBASIC6.63□□□□□ -1.35
RNF43Q68DV7 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC6.63□□□□□ -1.35
RNF43Q68DV7 MRPS21P3-201ENST00000436696 262 ntBASIC6.63□□□□□ -1.35
RNF43Q68DV7 PA2G4P6-201ENST00000438325 1197 ntBASIC6.63□□□□□ -1.35
RNF43Q68DV7 BX679664.2-201ENST00000439282 283 ntBASIC6.63□□□□□ -1.35
RNF43Q68DV7 AL512593.1-201ENST00000444758 779 ntBASIC6.63□□□□□ -1.35
RNF43Q68DV7 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC6.63□□□□□ -1.35
RNF43Q68DV7 BX284613.1-201ENST00000452221 1641 ntBASIC6.63□□□□□ -1.35
RNF43Q68DV7 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.63□□□□□ -1.35
RNF43Q68DV7 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC6.63□□□□□ -1.35
RNF43Q68DV7 AC105918.1-201ENST00000474399 838 ntBASIC6.63□□□□□ -1.35
RNF43Q68DV7 AC109445.1-201ENST00000512356 383 ntBASIC6.63□□□□□ -1.35
RNF43Q68DV7 RNA5SP418-201ENST00000515951 117 ntBASIC6.63□□□□□ -1.35
RNF43Q68DV7 RNU6-327P-201ENST00000516270 127 ntBASIC6.63□□□□□ -1.35
RNF43Q68DV7 RNU6-1045P-201ENST00000516321 107 ntBASIC6.63□□□□□ -1.35
RNF43Q68DV7 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC6.63□□□□□ -1.35
RNF43Q68DV7 AP002453.2-201ENST00000533503 320 ntBASIC6.63□□□□□ -1.35
RNF43Q68DV7 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC6.63□□□□□ -1.35
RNF43Q68DV7 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
RNF43Q68DV7 GTF2IP22-201ENST00000554443 182 ntBASIC6.63□□□□□ -1.35
RNF43Q68DV7 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC6.63□□□□□ -1.35
RNF43Q68DV7 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC6.63□□□□□ -1.35
RNF43Q68DV7 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC6.63□□□□□ -1.35
RNF43Q68DV7 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC6.63□□□□□ -1.35
RNF43Q68DV7 AC090826.1-203ENST00000569235 490 ntBASIC6.63□□□□□ -1.35
RNF43Q68DV7 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC6.63□□□□□ -1.35
RNF43Q68DV7 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC6.63□□□□□ -1.35
RNF43Q68DV7 AC013553.2-201ENST00000604244 589 ntBASIC6.63□□□□□ -1.35
RNF43Q68DV7 AL360085.1-201ENST00000604713 532 ntBASIC6.63□□□□□ -1.35
RNF43Q68DV7 AC109309.2-201ENST00000612597 332 ntBASIC6.63□□□□□ -1.35
RNF43Q68DV7 AC009233.1-201ENST00000616477 371 ntBASIC6.63□□□□□ -1.35
RNF43Q68DV7 AC010205.1-201ENST00000616668 449 ntBASIC6.63□□□□□ -1.35
RNF43Q68DV7 AC073569.3-201ENST00000619055 682 ntBASIC6.63□□□□□ -1.35
RNF43Q68DV7 MIR6886-201ENST00000619864 61 ntBASIC6.63□□□□□ -1.35
RNF43Q68DV7 AC124864.2-201ENST00000624736 186 ntBASIC6.63□□□□□ -1.35
RNF43Q68DV7 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC6.63□□□□□ -1.35
RNF43Q68DV7 MFSD8-245ENST00000641743 948 ntBASIC6.63□□□□□ -1.35
RNF43Q68DV7 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
RNF43Q68DV7 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC6.63□□□□□ -1.35
RNF43Q68DV7 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.63□□□□□ -1.35
RNF43Q68DV7 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
RNF43Q68DV7 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.63□□□□□ -1.35
RNF43Q68DV7 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.62□□□□□ -1.35
RNF43Q68DV7 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.62□□□□□ -1.35
RNF43Q68DV7 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC6.62□□□□□ -1.35
RNF43Q68DV7 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
RNF43Q68DV7 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC6.62□□□□□ -1.35
RNF43Q68DV7 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
RNF43Q68DV7 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms