Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 AL136131.1-201ENST00000406079 803 ntBASIC5.69□□□□□ -1.5
SLC44A4Q53GD3 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.69□□□□□ -1.5
SLC44A4Q53GD3 RNU4-22P-201ENST00000411058 166 ntBASIC5.69□□□□□ -1.5
SLC44A4Q53GD3 AC013404.1-201ENST00000413068 249 ntBASIC5.69□□□□□ -1.5
SLC44A4Q53GD3 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC5.69□□□□□ -1.5
SLC44A4Q53GD3 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SLC44A4Q53GD3 MTND5P25-201ENST00000430499 799 ntBASIC5.69□□□□□ -1.5
SLC44A4Q53GD3 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.69□□□□□ -1.5
SLC44A4Q53GD3 AC099670.2-201ENST00000435130 321 ntBASIC5.69□□□□□ -1.5
SLC44A4Q53GD3 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.69□□□□□ -1.5
SLC44A4Q53GD3 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.69□□□□□ -1.5
SLC44A4Q53GD3 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SLC44A4Q53GD3 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC5.69□□□□□ -1.5
SLC44A4Q53GD3 CBX1P2-201ENST00000453841 458 ntBASIC5.69□□□□□ -1.5
SLC44A4Q53GD3 HIGD1AP8-201ENST00000453927 274 ntBASIC5.69□□□□□ -1.5
SLC44A4Q53GD3 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC5.69□□□□□ -1.5
SLC44A4Q53GD3 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC5.69□□□□□ -1.5
SLC44A4Q53GD3 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC5.69□□□□□ -1.5
SLC44A4Q53GD3 AC117522.2-201ENST00000510049 657 ntBASIC5.69□□□□□ -1.5
SLC44A4Q53GD3 RNU6-513P-201ENST00000516104 104 ntBASIC5.69□□□□□ -1.5
SLC44A4Q53GD3 RNA5SP303-201ENST00000516192 130 ntBASIC5.69□□□□□ -1.5
SLC44A4Q53GD3 IGLV3-24-201ENST00000517477 197 ntBASIC5.69□□□□□ -1.5
SLC44A4Q53GD3 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC5.69□□□□□ -1.5
SLC44A4Q53GD3 AP001922.4-201ENST00000526967 290 ntBASIC5.69□□□□□ -1.5
SLC44A4Q53GD3 UBTFL10-201ENST00000528532 562 ntBASIC5.69□□□□□ -1.5
SLC44A4Q53GD3 AC006518.2-201ENST00000542513 940 ntBASIC5.69□□□□□ -1.5
SLC44A4Q53GD3 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC5.69□□□□□ -1.5
SLC44A4Q53GD3 CR383656.6-201ENST00000550518 394 ntBASIC5.69□□□□□ -1.5
SLC44A4Q53GD3 MRPS36P5-201ENST00000551909 298 ntBASIC5.69□□□□□ -1.5
SLC44A4Q53GD3 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.69□□□□□ -1.5
SLC44A4Q53GD3 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.69□□□□□ -1.5
SLC44A4Q53GD3 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC5.69□□□□□ -1.5
SLC44A4Q53GD3 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC5.69□□□□□ -1.5
SLC44A4Q53GD3 MIR4311-201ENST00000580794 100 ntBASIC5.69□□□□□ -1.5
SLC44A4Q53GD3 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC5.69□□□□□ -1.5
SLC44A4Q53GD3 GAS5-AS1-201ENST00000602767 694 ntBASIC5.69□□□□□ -1.5
SLC44A4Q53GD3 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.69□□□□□ -1.5
SLC44A4Q53GD3 TAS2R6P-201ENST00000605022 826 ntBASIC5.69□□□□□ -1.5
SLC44A4Q53GD3 AL451086.1-201ENST00000605596 223 ntBASIC5.69□□□□□ -1.5
SLC44A4Q53GD3 AC024060.1-201ENST00000607052 494 ntBASIC5.69□□□□□ -1.5
SLC44A4Q53GD3 AC011330.2-201ENST00000621680 635 ntBASIC5.69□□□□□ -1.5
SLC44A4Q53GD3 AP002791.1-201ENST00000623291 381 ntBASIC5.69□□□□□ -1.5
SLC44A4Q53GD3 AC112694.2-201ENST00000623697 768 ntBASIC5.69□□□□□ -1.5
SLC44A4Q53GD3 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC5.69□□□□□ -1.5
SLC44A4Q53GD3 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC5.69□□□□□ -1.5
SLC44A4Q53GD3 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.69□□□□□ -1.5
SLC44A4Q53GD3 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
SLC44A4Q53GD3 AC239868.2-201ENST00000564237 4527 ntBASIC5.69□□□□□ -1.5
SLC44A4Q53GD3 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.69□□□□□ -1.5
SLC44A4Q53GD3 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
SLC44A4Q53GD3 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
SLC44A4Q53GD3 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SLC44A4Q53GD3 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SLC44A4Q53GD3 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
SLC44A4Q53GD3 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.68□□□□□ -1.5
SLC44A4Q53GD3 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
SLC44A4Q53GD3 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SLC44A4Q53GD3 AL121950.1-201ENST00000624993 2077 ntBASIC5.68□□□□□ -1.5
SLC44A4Q53GD3 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SLC44A4Q53GD3 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.68□□□□□ -1.5
SLC44A4Q53GD3 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SLC44A4Q53GD3 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
SLC44A4Q53GD3 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SLC44A4Q53GD3 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
SLC44A4Q53GD3 RNU6-666P-201ENST00000363499 107 ntBASIC5.68□□□□□ -1.5
SLC44A4Q53GD3 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
SLC44A4Q53GD3 RNU6-185P-201ENST00000384421 107 ntBASIC5.68□□□□□ -1.5
SLC44A4Q53GD3 DUTP5-201ENST00000406790 469 ntBASIC5.68□□□□□ -1.5
SLC44A4Q53GD3 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.68□□□□□ -1.5
SLC44A4Q53GD3 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC5.68□□□□□ -1.5
SLC44A4Q53GD3 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.68□□□□□ -1.5
SLC44A4Q53GD3 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC5.68□□□□□ -1.5
SLC44A4Q53GD3 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC5.68□□□□□ -1.5
SLC44A4Q53GD3 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SLC44A4Q53GD3 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.68□□□□□ -1.5
SLC44A4Q53GD3 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC5.68□□□□□ -1.5
SLC44A4Q53GD3 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC5.68□□□□□ -1.5
SLC44A4Q53GD3 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.68□□□□□ -1.5
SLC44A4Q53GD3 VN1R25P-201ENST00000443385 738 ntBASIC5.68□□□□□ -1.5
SLC44A4Q53GD3 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC5.68□□□□□ -1.5
SLC44A4Q53GD3 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC5.68□□□□□ -1.5
SLC44A4Q53GD3 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC5.68□□□□□ -1.5
SLC44A4Q53GD3 DNAJB5P1-201ENST00000454004 806 ntBASIC5.68□□□□□ -1.5
SLC44A4Q53GD3 AC244505.3-201ENST00000454598 187 ntBASIC5.68□□□□□ -1.5
SLC44A4Q53GD3 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC5.68□□□□□ -1.5
SLC44A4Q53GD3 PTGES3P5-201ENST00000455109 434 ntBASIC5.68□□□□□ -1.5
SLC44A4Q53GD3 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.68□□□□□ -1.5
SLC44A4Q53GD3 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.68□□□□□ -1.5
SLC44A4Q53GD3 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.68□□□□□ -1.5
SLC44A4Q53GD3 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC5.68□□□□□ -1.5
SLC44A4Q53GD3 RNA5SP230-201ENST00000517039 122 ntBASIC5.68□□□□□ -1.5
SLC44A4Q53GD3 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.68□□□□□ -1.5
SLC44A4Q53GD3 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC5.68□□□□□ -1.5
SLC44A4Q53GD3 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
SLC44A4Q53GD3 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
SLC44A4Q53GD3 RBM22P1-201ENST00000578589 1214 ntBASIC5.68□□□□□ -1.5
SLC44A4Q53GD3 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC5.68□□□□□ -1.5
SLC44A4Q53GD3 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.68□□□□□ -1.5
SLC44A4Q53GD3 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.68□□□□□ -1.5
SLC44A4Q53GD3 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms