Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.64
LTBQ06643 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC4.83□□□□□ -1.64
LTBQ06643 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
LTBQ06643 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.83□□□□□ -1.64
LTBQ06643 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LTBQ06643 MAPK10-338ENST00000641647 3362 ntBASIC4.83□□□□□ -1.64
LTBQ06643 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
LTBQ06643 Z95331.1-201ENST00000623075 23112 ntBASIC4.83□□□□□ -1.64
LTBQ06643 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LTBQ06643 OR1L6-202ENST00000373684 1044 ntBASIC4.83□□□□□ -1.64
LTBQ06643 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LTBQ06643 RN7SKP97-201ENST00000410966 333 ntBASIC4.83□□□□□ -1.64
LTBQ06643 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC4.83□□□□□ -1.64
LTBQ06643 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.83□□□□□ -1.64
LTBQ06643 RAB9AP4-201ENST00000415230 609 ntBASIC4.83□□□□□ -1.64
LTBQ06643 MTCO3P4-201ENST00000419236 787 ntBASIC4.83□□□□□ -1.64
LTBQ06643 MTCYBP7-201ENST00000419540 1134 ntBASIC4.83□□□□□ -1.64
LTBQ06643 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC4.83□□□□□ -1.64
LTBQ06643 OSTCP5-201ENST00000425293 453 ntBASIC4.83□□□□□ -1.64
LTBQ06643 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.83□□□□□ -1.64
LTBQ06643 AC005033.1-201ENST00000428904 813 ntBASIC4.83□□□□□ -1.64
LTBQ06643 HSPD1P12-201ENST00000429127 1069 ntBASIC4.83□□□□□ -1.64
LTBQ06643 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LTBQ06643 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.83□□□□□ -1.64
LTBQ06643 BX119904.1-201ENST00000432026 348 ntBASIC4.83□□□□□ -1.64
LTBQ06643 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.83□□□□□ -1.64
LTBQ06643 RPL19P16-201ENST00000433839 588 ntBASIC4.83□□□□□ -1.64
LTBQ06643 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC4.83□□□□□ -1.64
LTBQ06643 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC4.83□□□□□ -1.64
LTBQ06643 CYCSP12-201ENST00000437729 300 ntBASIC4.83□□□□□ -1.64
LTBQ06643 ARF4P4-201ENST00000439608 520 ntBASIC4.83□□□□□ -1.64
LTBQ06643 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC4.83□□□□□ -1.64
LTBQ06643 CR769776.1-201ENST00000441254 787 ntBASIC4.83□□□□□ -1.64
LTBQ06643 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.83□□□□□ -1.64
LTBQ06643 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LTBQ06643 AL358794.1-201ENST00000445689 381 ntBASIC4.83□□□□□ -1.64
LTBQ06643 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.83□□□□□ -1.64
LTBQ06643 OR52E3P-201ENST00000452083 936 ntBASIC4.83□□□□□ -1.64
LTBQ06643 AC092155.2-201ENST00000454675 477 ntBASIC4.83□□□□□ -1.64
LTBQ06643 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.83□□□□□ -1.64
LTBQ06643 NAP1L1P3-201ENST00000462291 880 ntBASIC4.83□□□□□ -1.64
LTBQ06643 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC4.83□□□□□ -1.64
LTBQ06643 RN7SL51P-201ENST00000468230 285 ntBASIC4.83□□□□□ -1.64
LTBQ06643 STRADBP1-201ENST00000478954 1281 ntBASIC4.83□□□□□ -1.64
LTBQ06643 AC134050.1-201ENST00000495088 933 ntBASIC4.83□□□□□ -1.64
LTBQ06643 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC4.83□□□□□ -1.64
LTBQ06643 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.83□□□□□ -1.64
LTBQ06643 AC113420.1-201ENST00000507903 571 ntBASIC4.83□□□□□ -1.64
LTBQ06643 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC4.83□□□□□ -1.64
LTBQ06643 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC4.83□□□□□ -1.64
LTBQ06643 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC4.83□□□□□ -1.64
LTBQ06643 RNU6-319P-201ENST00000516025 108 ntBASIC4.83□□□□□ -1.64
LTBQ06643 MRPS36P3-201ENST00000519284 130 ntBASIC4.83□□□□□ -1.64
LTBQ06643 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.83□□□□□ -1.64
LTBQ06643 AC027369.5-201ENST00000533838 755 ntBASIC4.83□□□□□ -1.64
LTBQ06643 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.83□□□□□ -1.64
LTBQ06643 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC4.83□□□□□ -1.64
LTBQ06643 BLZF2P-201ENST00000553776 1130 ntBASIC4.83□□□□□ -1.64
LTBQ06643 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC4.83□□□□□ -1.64
LTBQ06643 AC010735.1-201ENST00000567305 1026 ntBASIC4.83□□□□□ -1.64
LTBQ06643 AC009852.2-201ENST00000567898 485 ntBASIC4.83□□□□□ -1.64
LTBQ06643 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC4.83□□□□□ -1.64
LTBQ06643 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC4.83□□□□□ -1.64
LTBQ06643 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC4.83□□□□□ -1.64
LTBQ06643 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.83□□□□□ -1.64
LTBQ06643 AC069304.3-201ENST00000603938 1084 ntBASIC4.83□□□□□ -1.64
LTBQ06643 AL358072.1-201ENST00000604156 575 ntBASIC4.83□□□□□ -1.64
LTBQ06643 AC245008.1-201ENST00000608123 476 ntBASIC4.83□□□□□ -1.64
LTBQ06643 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
LTBQ06643 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
LTBQ06643 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
LTBQ06643 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LTBQ06643 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LTBQ06643 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LTBQ06643 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
LTBQ06643 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.83□□□□□ -1.64
LTBQ06643 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LTBQ06643 AL138820.1-201ENST00000617901 5305 ntBASIC4.83□□□□□ -1.64
LTBQ06643 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC4.83□□□□□ -1.64
LTBQ06643 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
LTBQ06643 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.83□□□□□ -1.64
LTBQ06643 AC079298.1-201ENST00000625026 1619 ntBASIC4.83□□□□□ -1.64
LTBQ06643 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC4.83□□□□□ -1.64
LTBQ06643 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LTBQ06643 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
LTBQ06643 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
LTBQ06643 AC120338.1-201ENST00000625074 1541 ntBASIC4.82□□□□□ -1.64
LTBQ06643 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.82□□□□□ -1.64
LTBQ06643 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
LTBQ06643 TCP11X1-202ENST00000622971 1372 ntBASIC4.82□□□□□ -1.64
LTBQ06643 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
LTBQ06643 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
LTBQ06643 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
LTBQ06643 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
LTBQ06643 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC4.82□□□□□ -1.64
LTBQ06643 AC098592.2-201ENST00000413158 265 ntBASIC4.82□□□□□ -1.64
LTBQ06643 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.82□□□□□ -1.64
LTBQ06643 AL158825.1-201ENST00000414735 521 ntBASIC4.82□□□□□ -1.64
LTBQ06643 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC4.82□□□□□ -1.64
LTBQ06643 RPS26P13-201ENST00000419030 330 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 128.3 ms