Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
LMO4P61968 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
LMO4P61968 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC4.12□□□□□ -1.75
LMO4P61968 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
LMO4P61968 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
LMO4P61968 AC004656.1-201ENST00000568479 4951 ntBASIC4.12□□□□□ -1.75
LMO4P61968 DDX6P1-205ENST00000441966 1436 ntBASIC4.12□□□□□ -1.75
LMO4P61968 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
LMO4P61968 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
LMO4P61968 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
LMO4P61968 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
LMO4P61968 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
LMO4P61968 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
LMO4P61968 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.11□□□□□ -1.75
LMO4P61968 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
LMO4P61968 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
LMO4P61968 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
LMO4P61968 ECM1P2-201ENST00000503354 1577 ntBASIC4.11□□□□□ -1.75
LMO4P61968 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
LMO4P61968 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC4.11□□□□□ -1.75
LMO4P61968 AC097461.1-201ENST00000568928 2821 ntBASIC4.11□□□□□ -1.75
LMO4P61968 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
LMO4P61968 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC4.11□□□□□ -1.75
LMO4P61968 SPATA2P1-201ENST00000431223 2055 ntBASIC4.11□□□□□ -1.75
LMO4P61968 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC4.11□□□□□ -1.75
LMO4P61968 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
LMO4P61968 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
LMO4P61968 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
LMO4P61968 AL024507.1-201ENST00000412741 274 ntBASIC4.11□□□□□ -1.75
LMO4P61968 NPM1P40-201ENST00000412758 733 ntBASIC4.11□□□□□ -1.75
LMO4P61968 AL807761.1-201ENST00000417622 171 ntBASIC4.11□□□□□ -1.75
LMO4P61968 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.11□□□□□ -1.75
LMO4P61968 AC019050.1-201ENST00000418508 492 ntBASIC4.11□□□□□ -1.75
LMO4P61968 AC004074.1-201ENST00000421810 1063 ntBASIC4.11□□□□□ -1.75
LMO4P61968 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC4.11□□□□□ -1.75
LMO4P61968 AC022022.1-201ENST00000430304 178 ntBASIC4.11□□□□□ -1.75
LMO4P61968 AL138878.2-201ENST00000440581 1241 ntBASIC4.11□□□□□ -1.75
LMO4P61968 AL450023.3-201ENST00000440592 271 ntBASIC4.11□□□□□ -1.75
LMO4P61968 TXNP5-201ENST00000441043 315 ntBASIC4.11□□□□□ -1.75
LMO4P61968 AC011753.3-201ENST00000443436 406 ntBASIC4.11□□□□□ -1.75
LMO4P61968 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.11□□□□□ -1.75
LMO4P61968 SLC25A18P1-201ENST00000449385 454 ntBASIC4.11□□□□□ -1.75
LMO4P61968 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.11□□□□□ -1.75
LMO4P61968 CALM1P2-201ENST00000452941 448 ntBASIC4.11□□□□□ -1.75
LMO4P61968 AL513533.1-201ENST00000453728 415 ntBASIC4.11□□□□□ -1.75
LMO4P61968 CBX1P2-201ENST00000453841 458 ntBASIC4.11□□□□□ -1.75
LMO4P61968 MTND2P6-201ENST00000455337 1030 ntBASIC4.11□□□□□ -1.75
LMO4P61968 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC4.11□□□□□ -1.75
LMO4P61968 GYG1P1-201ENST00000460864 698 ntBASIC4.11□□□□□ -1.75
LMO4P61968 AC104164.3-201ENST00000467363 1258 ntBASIC4.11□□□□□ -1.75
LMO4P61968 RN7SL738P-201ENST00000470264 297 ntBASIC4.11□□□□□ -1.75
LMO4P61968 RN7SL205P-201ENST00000490174 284 ntBASIC4.11□□□□□ -1.75
LMO4P61968 AC008897.1-201ENST00000494006 347 ntBASIC4.11□□□□□ -1.75
LMO4P61968 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
LMO4P61968 AC016559.2-201ENST00000510759 359 ntBASIC4.11□□□□□ -1.75
LMO4P61968 MTCO3P27-201ENST00000514397 196 ntBASIC4.11□□□□□ -1.75
LMO4P61968 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC4.11□□□□□ -1.75
LMO4P61968 IGKV1-32-201ENST00000519290 311 ntBASIC4.11□□□□□ -1.75
LMO4P61968 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.11□□□□□ -1.75
LMO4P61968 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC4.11□□□□□ -1.75
LMO4P61968 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC4.11□□□□□ -1.75
LMO4P61968 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC4.11□□□□□ -1.75
LMO4P61968 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC4.11□□□□□ -1.75
LMO4P61968 SOX5P1-201ENST00000524155 1127 ntBASIC4.11□□□□□ -1.75
LMO4P61968 AC023538.1-201ENST00000534576 736 ntBASIC4.11□□□□□ -1.75
LMO4P61968 OR8K4P-201ENST00000534608 872 ntBASIC4.11□□□□□ -1.75
LMO4P61968 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.11□□□□□ -1.75
LMO4P61968 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC4.11□□□□□ -1.75
LMO4P61968 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.11□□□□□ -1.75
LMO4P61968 AC079075.1-201ENST00000559543 878 ntBASIC4.11□□□□□ -1.75
LMO4P61968 AC018552.1-201ENST00000562099 811 ntBASIC4.11□□□□□ -1.75
LMO4P61968 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.11□□□□□ -1.75
LMO4P61968 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.11□□□□□ -1.75
LMO4P61968 RN7SL52P-201ENST00000584271 284 ntBASIC4.11□□□□□ -1.75
LMO4P61968 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.11□□□□□ -1.75
LMO4P61968 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
LMO4P61968 AC011453.2-201ENST00000603737 729 ntBASIC4.11□□□□□ -1.75
LMO4P61968 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
LMO4P61968 AL031658.2-201ENST00000616850 651 ntBASIC4.11□□□□□ -1.75
LMO4P61968 RN7SL722P-201ENST00000617780 284 ntBASIC4.11□□□□□ -1.75
LMO4P61968 RN7SL565P-201ENST00000618246 284 ntBASIC4.11□□□□□ -1.75
LMO4P61968 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
LMO4P61968 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
LMO4P61968 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
LMO4P61968 AC068880.4-201ENST00000623082 495 ntBASIC4.11□□□□□ -1.75
LMO4P61968 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.11□□□□□ -1.75
LMO4P61968 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.11□□□□□ -1.75
LMO4P61968 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
LMO4P61968 GVINP1-202ENST00000531871 7271 ntBASIC4.11□□□□□ -1.75
LMO4P61968 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
LMO4P61968 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
LMO4P61968 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
LMO4P61968 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
LMO4P61968 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
LMO4P61968 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC4.11□□□□□ -1.75
LMO4P61968 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.11□□□□□ -1.75
LMO4P61968 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.11□□□□□ -1.75
LMO4P61968 TMEM161BP1-201ENST00000457388 1457 ntBASIC4.11□□□□□ -1.75
LMO4P61968 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
LMO4P61968 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms