Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
RHBDL3P58872 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
RHBDL3P58872 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RHBDL3P58872 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
RHBDL3P58872 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RHBDL3P58872 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RHBDL3P58872 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC6.11□□□□□ -1.43
RHBDL3P58872 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RHBDL3P58872 MAPK6PS2-201ENST00000379571 2060 ntBASIC6.1□□□□□ -1.43
RHBDL3P58872 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC6.1□□□□□ -1.43
RHBDL3P58872 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
RHBDL3P58872 ENSAP3-201ENST00000312710 333 ntBASIC6.1□□□□□ -1.43
RHBDL3P58872 RN7SKP145-201ENST00000363291 303 ntBASIC6.1□□□□□ -1.43
RHBDL3P58872 RN7SKP224-201ENST00000364140 325 ntBASIC6.1□□□□□ -1.43
RHBDL3P58872 RNU6-146P-201ENST00000384602 108 ntBASIC6.1□□□□□ -1.43
RHBDL3P58872 AC092745.2-202ENST00000411880 369 ntBASIC6.1□□□□□ -1.43
RHBDL3P58872 AL445183.3-201ENST00000414168 502 ntBASIC6.1□□□□□ -1.43
RHBDL3P58872 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC6.1□□□□□ -1.43
RHBDL3P58872 AL158073.1-201ENST00000426848 1104 ntBASIC6.1□□□□□ -1.43
RHBDL3P58872 DEFB130D-201ENST00000426866 237 ntBASIC6.1□□□□□ -1.43
RHBDL3P58872 RPL7AP49-201ENST00000429522 581 ntBASIC6.1□□□□□ -1.43
RHBDL3P58872 AL591438.1-201ENST00000433508 581 ntBASIC6.1□□□□□ -1.43
RHBDL3P58872 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RHBDL3P58872 RPL12P46-201ENST00000436610 195 ntBASIC6.1□□□□□ -1.43
RHBDL3P58872 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC6.1□□□□□ -1.43
RHBDL3P58872 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC6.1□□□□□ -1.43
RHBDL3P58872 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC6.1□□□□□ -1.43
RHBDL3P58872 RPL7P33-201ENST00000444159 742 ntBASIC6.1□□□□□ -1.43
RHBDL3P58872 H2AFZP6-201ENST00000444403 394 ntBASIC6.1□□□□□ -1.43
RHBDL3P58872 TPTE2P6-202ENST00000445572 1007 ntBASIC6.1□□□□□ -1.43
RHBDL3P58872 AC239809.1-201ENST00000450470 217 ntBASIC6.1□□□□□ -1.43
RHBDL3P58872 AC090602.1-201ENST00000469695 252 ntBASIC6.1□□□□□ -1.43
RHBDL3P58872 AC006511.1-201ENST00000470614 315 ntBASIC6.1□□□□□ -1.43
RHBDL3P58872 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC6.1□□□□□ -1.43
RHBDL3P58872 MTND6P6-201ENST00000478031 263 ntBASIC6.1□□□□□ -1.43
RHBDL3P58872 AC090058.1-201ENST00000498788 435 ntBASIC6.1□□□□□ -1.43
RHBDL3P58872 AC140172.1-201ENST00000502928 141 ntBASIC6.1□□□□□ -1.43
RHBDL3P58872 MTCO3P27-201ENST00000514397 196 ntBASIC6.1□□□□□ -1.43
RHBDL3P58872 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC6.1□□□□□ -1.43
RHBDL3P58872 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC6.1□□□□□ -1.43
RHBDL3P58872 COX6B1P6-201ENST00000522347 255 ntBASIC6.1□□□□□ -1.43
RHBDL3P58872 AP003102.1-201ENST00000525638 661 ntBASIC6.1□□□□□ -1.43
RHBDL3P58872 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC6.1□□□□□ -1.43
RHBDL3P58872 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC6.1□□□□□ -1.43
RHBDL3P58872 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC6.1□□□□□ -1.43
RHBDL3P58872 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC6.1□□□□□ -1.43
RHBDL3P58872 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC6.1□□□□□ -1.43
RHBDL3P58872 CSNK1A1P1-202ENST00000563423 981 ntBASIC6.1□□□□□ -1.43
RHBDL3P58872 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC6.1□□□□□ -1.43
RHBDL3P58872 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC6.1□□□□□ -1.43
RHBDL3P58872 AC090312.2-201ENST00000582687 378 ntBASIC6.1□□□□□ -1.43
RHBDL3P58872 AC096586.1-201ENST00000610267 561 ntBASIC6.1□□□□□ -1.43
RHBDL3P58872 AC100847.1-201ENST00000611316 481 ntBASIC6.1□□□□□ -1.43
RHBDL3P58872 AC005156.1-201ENST00000613371 573 ntBASIC6.1□□□□□ -1.43
RHBDL3P58872 AC016717.3-201ENST00000624730 554 ntBASIC6.1□□□□□ -1.43
RHBDL3P58872 U6.107-201ENST00000637108 79 ntBASIC6.1□□□□□ -1.43
RHBDL3P58872 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
RHBDL3P58872 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RHBDL3P58872 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RHBDL3P58872 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC6.1□□□□□ -1.43
RHBDL3P58872 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
RHBDL3P58872 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
RHBDL3P58872 DDX18P3-201ENST00000404856 2007 ntBASIC6.09□□□□□ -1.43
RHBDL3P58872 CASC19-260ENST00000641828 2001 ntBASIC6.09□□□□□ -1.43
RHBDL3P58872 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RHBDL3P58872 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC6.09□□□□□ -1.43
RHBDL3P58872 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RHBDL3P58872 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC6.09□□□□□ -1.43
RHBDL3P58872 AC090971.4-201ENST00000560291 1800 ntBASIC6.09□□□□□ -1.43
RHBDL3P58872 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
RHBDL3P58872 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.09□□□□□ -1.43
RHBDL3P58872 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
RHBDL3P58872 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC6.09□□□□□ -1.43
RHBDL3P58872 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
RHBDL3P58872 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
RHBDL3P58872 AC022031.1-201ENST00000585985 2593 ntBASIC6.09□□□□□ -1.43
RHBDL3P58872 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RHBDL3P58872 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
RHBDL3P58872 OR4K17-201ENST00000315543 1032 ntBASIC6.09□□□□□ -1.43
RHBDL3P58872 RN7SKP115-201ENST00000363177 317 ntBASIC6.09□□□□□ -1.43
RHBDL3P58872 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
RHBDL3P58872 DNAJC19P6-201ENST00000401853 280 ntBASIC6.09□□□□□ -1.43
RHBDL3P58872 AL355615.1-201ENST00000406187 641 ntBASIC6.09□□□□□ -1.43
RHBDL3P58872 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC6.09□□□□□ -1.43
RHBDL3P58872 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC6.09□□□□□ -1.43
RHBDL3P58872 TEX41-205ENST00000431734 529 ntTSL 4 BASIC6.09□□□□□ -1.43
RHBDL3P58872 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
RHBDL3P58872 RPL7P11-201ENST00000437586 658 ntBASIC6.09□□□□□ -1.43
RHBDL3P58872 AC092170.1-201ENST00000440211 356 ntBASIC6.09□□□□□ -1.43
RHBDL3P58872 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC6.09□□□□□ -1.43
RHBDL3P58872 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC6.09□□□□□ -1.43
RHBDL3P58872 AC023271.1-201ENST00000445936 1090 ntBASIC6.09□□□□□ -1.43
RHBDL3P58872 AC068135.1-201ENST00000446164 246 ntBASIC6.09□□□□□ -1.43
RHBDL3P58872 AL096803.2-201ENST00000450032 677 ntBASIC6.09□□□□□ -1.43
RHBDL3P58872 IGHV5-78-201ENST00000450948 295 ntBASIC6.09□□□□□ -1.43
RHBDL3P58872 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RHBDL3P58872 RPL23AP71-201ENST00000470966 469 ntBASIC6.09□□□□□ -1.43
RHBDL3P58872 AC007686.1-201ENST00000488511 463 ntBASIC6.09□□□□□ -1.43
RHBDL3P58872 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC6.09□□□□□ -1.43
RHBDL3P58872 RN7SL244P-201ENST00000493405 297 ntBASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms