Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CDH4P55283 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
CDH4P55283 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.79□□□□□ -1.64
CDH4P55283 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CDH4P55283 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.79□□□□□ -1.64
CDH4P55283 MAPK10-320ENST00000641462 6696 ntBASIC4.79□□□□□ -1.64
CDH4P55283 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CDH4P55283 A2MP1-204ENST00000566278 4130 ntBASIC4.78□□□□□ -1.64
CDH4P55283 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
CDH4P55283 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.78□□□□□ -1.64
CDH4P55283 AL672167.1-204ENST00000641875 3017 ntBASIC4.78□□□□□ -1.64
CDH4P55283 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
CDH4P55283 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.78□□□□□ -1.64
CDH4P55283 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CDH4P55283 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CDH4P55283 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.78□□□□□ -1.64
CDH4P55283 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CDH4P55283 RN7SKP115-201ENST00000363177 317 ntBASIC4.78□□□□□ -1.64
CDH4P55283 SNORD113.2-201ENST00000364166 89 ntBASIC4.78□□□□□ -1.64
CDH4P55283 SNORA71.2-201ENST00000364941 134 ntBASIC4.78□□□□□ -1.64
CDH4P55283 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
CDH4P55283 RNU6-398P-201ENST00000384143 109 ntBASIC4.78□□□□□ -1.64
CDH4P55283 AL136131.1-201ENST00000406079 803 ntBASIC4.78□□□□□ -1.64
CDH4P55283 GLS-203ENST00000409215 632 ntTSL 4 BASIC4.78□□□□□ -1.64
CDH4P55283 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC4.78□□□□□ -1.64
CDH4P55283 OR2AH1P-201ENST00000425717 928 ntBASIC4.78□□□□□ -1.64
CDH4P55283 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.78□□□□□ -1.64
CDH4P55283 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.78□□□□□ -1.64
CDH4P55283 AC011753.3-201ENST00000443436 406 ntBASIC4.78□□□□□ -1.64
CDH4P55283 CEACAMP6-201ENST00000452007 574 ntBASIC4.78□□□□□ -1.64
CDH4P55283 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.78□□□□□ -1.64
CDH4P55283 RN7SL354P-201ENST00000469282 294 ntBASIC4.78□□□□□ -1.64
CDH4P55283 AC104763.1-201ENST00000475274 360 ntBASIC4.78□□□□□ -1.64
CDH4P55283 RPL23AP72-201ENST00000492447 435 ntBASIC4.78□□□□□ -1.64
CDH4P55283 MTND4LP2-201ENST00000502312 285 ntBASIC4.78□□□□□ -1.64
CDH4P55283 AC098799.3-201ENST00000506095 438 ntBASIC4.78□□□□□ -1.64
CDH4P55283 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.78□□□□□ -1.64
CDH4P55283 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.78□□□□□ -1.64
CDH4P55283 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC4.78□□□□□ -1.64
CDH4P55283 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC4.78□□□□□ -1.64
CDH4P55283 AC234771.5-201ENST00000600161 514 ntBASIC4.78□□□□□ -1.64
CDH4P55283 MIR7703-201ENST00000620784 77 ntBASIC4.78□□□□□ -1.64
CDH4P55283 AC105105.5-201ENST00000622635 1294 ntBASIC4.78□□□□□ -1.64
CDH4P55283 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.78□□□□□ -1.64
CDH4P55283 DHX40P1-201ENST00000588725 1412 ntBASIC4.78□□□□□ -1.64
CDH4P55283 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.78□□□□□ -1.64
CDH4P55283 AL731532.2-201ENST00000623542 1953 ntBASIC4.78□□□□□ -1.64
CDH4P55283 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.78□□□□□ -1.64
CDH4P55283 AC000123.3-201ENST00000624029 4975 ntBASIC4.78□□□□□ -1.64
CDH4P55283 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CDH4P55283 AC120338.1-201ENST00000625074 1541 ntBASIC4.77□□□□□ -1.65
CDH4P55283 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CDH4P55283 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.77□□□□□ -1.65
CDH4P55283 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.77□□□□□ -1.65
CDH4P55283 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.77□□□□□ -1.65
CDH4P55283 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
CDH4P55283 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
CDH4P55283 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CDH4P55283 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CDH4P55283 MIR365B-201ENST00000362317 111 ntBASIC4.77□□□□□ -1.65
CDH4P55283 RNA5SP505-201ENST00000364748 108 ntBASIC4.77□□□□□ -1.65
CDH4P55283 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CDH4P55283 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CDH4P55283 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CDH4P55283 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CDH4P55283 RPS3AP23-201ENST00000401762 784 ntBASIC4.77□□□□□ -1.65
CDH4P55283 AL080315.1-201ENST00000406055 466 ntBASIC4.77□□□□□ -1.65
CDH4P55283 AC245028.1-201ENST00000423259 256 ntBASIC4.77□□□□□ -1.65
CDH4P55283 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC4.77□□□□□ -1.65
CDH4P55283 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC4.77□□□□□ -1.65
CDH4P55283 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.77□□□□□ -1.65
CDH4P55283 RAB28P3-201ENST00000448325 597 ntBASIC4.77□□□□□ -1.65
CDH4P55283 NPM1P39-201ENST00000449818 867 ntBASIC4.77□□□□□ -1.65
CDH4P55283 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.77□□□□□ -1.65
CDH4P55283 RPS29P33-201ENST00000456717 146 ntBASIC4.77□□□□□ -1.65
CDH4P55283 RN7SL205P-201ENST00000490174 284 ntBASIC4.77□□□□□ -1.65
CDH4P55283 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.77□□□□□ -1.65
CDH4P55283 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.77□□□□□ -1.65
CDH4P55283 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.77□□□□□ -1.65
CDH4P55283 AC007016.1-201ENST00000512110 244 ntBASIC4.77□□□□□ -1.65
CDH4P55283 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.77□□□□□ -1.65
CDH4P55283 OR5AN2P-201ENST00000534535 896 ntBASIC4.77□□□□□ -1.65
CDH4P55283 CR383656.6-201ENST00000550518 394 ntBASIC4.77□□□□□ -1.65
CDH4P55283 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC4.77□□□□□ -1.65
CDH4P55283 MIR4330-201ENST00000579077 105 ntBASIC4.77□□□□□ -1.65
CDH4P55283 RN7SL52P-201ENST00000584271 284 ntBASIC4.77□□□□□ -1.65
CDH4P55283 AL133338.2-201ENST00000604292 736 ntBASIC4.77□□□□□ -1.65
CDH4P55283 RN7SL722P-201ENST00000617780 284 ntBASIC4.77□□□□□ -1.65
CDH4P55283 RN7SL565P-201ENST00000618246 284 ntBASIC4.77□□□□□ -1.65
CDH4P55283 AP001642.1-201ENST00000624727 2117 ntBASIC4.77□□□□□ -1.65
CDH4P55283 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CDH4P55283 AC108467.2-201ENST00000617640 1597 ntBASIC4.77□□□□□ -1.65
CDH4P55283 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CDH4P55283 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CDH4P55283 VPS35P1-201ENST00000563400 1518 ntBASIC4.77□□□□□ -1.65
CDH4P55283 KARSP3-201ENST00000571212 1504 ntBASIC4.77□□□□□ -1.65
CDH4P55283 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CDH4P55283 AL022393.1-201ENST00000625142 1677 ntBASIC4.77□□□□□ -1.65
CDH4P55283 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CDH4P55283 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms