Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 Y_RNA.311-201ENST00000365068 96 ntBASIC6.41□□□□□ -1.38
PMS1P54277 Y_RNA.359-201ENST00000365498 102 ntBASIC6.41□□□□□ -1.38
PMS1P54277 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
PMS1P54277 RNU6-1119P-201ENST00000384349 108 ntBASIC6.41□□□□□ -1.38
PMS1P54277 U3.28-201ENST00000391249 210 ntBASIC6.41□□□□□ -1.38
PMS1P54277 AL034374.1-201ENST00000406329 351 ntBASIC6.41□□□□□ -1.38
PMS1P54277 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC6.41□□□□□ -1.38
PMS1P54277 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC6.41□□□□□ -1.38
PMS1P54277 AP001324.1-201ENST00000428553 399 ntBASIC6.41□□□□□ -1.38
PMS1P54277 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC6.41□□□□□ -1.38
PMS1P54277 AC023141.8-201ENST00000442554 208 ntBASIC6.41□□□□□ -1.38
PMS1P54277 RPL5P10-201ENST00000445207 894 ntBASIC6.41□□□□□ -1.38
PMS1P54277 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC6.41□□□□□ -1.38
PMS1P54277 TIMM8BP2-201ENST00000445940 251 ntBASIC6.41□□□□□ -1.38
PMS1P54277 EEF1B2P3-201ENST00000447718 678 ntBASIC6.41□□□□□ -1.38
PMS1P54277 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC6.41□□□□□ -1.38
PMS1P54277 RN7SL193P-201ENST00000491708 276 ntBASIC6.41□□□□□ -1.38
PMS1P54277 AC104685.1-201ENST00000502445 371 ntBASIC6.41□□□□□ -1.38
PMS1P54277 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC6.41□□□□□ -1.38
PMS1P54277 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
PMS1P54277 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC6.41□□□□□ -1.38
PMS1P54277 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC6.41□□□□□ -1.38
PMS1P54277 RNU6-416P-201ENST00000516265 103 ntBASIC6.41□□□□□ -1.38
PMS1P54277 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC6.41□□□□□ -1.38
PMS1P54277 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
PMS1P54277 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
PMS1P54277 AP002812.4-201ENST00000532139 286 ntBASIC6.41□□□□□ -1.38
PMS1P54277 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC6.41□□□□□ -1.38
PMS1P54277 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
PMS1P54277 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
PMS1P54277 AC090888.3-201ENST00000558917 509 ntBASIC6.41□□□□□ -1.38
PMS1P54277 RPL12P48-201ENST00000605620 304 ntBASIC6.41□□□□□ -1.38
PMS1P54277 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC6.41□□□□□ -1.38
PMS1P54277 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC6.41□□□□□ -1.38
PMS1P54277 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC6.41□□□□□ -1.38
PMS1P54277 AL683826.1-201ENST00000624104 627 ntBASIC6.41□□□□□ -1.38
PMS1P54277 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
PMS1P54277 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
PMS1P54277 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
PMS1P54277 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
PMS1P54277 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
PMS1P54277 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.41□□□□□ -1.38
PMS1P54277 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
PMS1P54277 AC104966.1-201ENST00000467010 1464 ntBASIC6.41□□□□□ -1.38
PMS1P54277 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
PMS1P54277 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
PMS1P54277 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
PMS1P54277 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
PMS1P54277 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.4□□□□□ -1.38
PMS1P54277 MAPK6PS3-201ENST00000403865 2162 ntBASIC6.4□□□□□ -1.38
PMS1P54277 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
PMS1P54277 Y_RNA.18-201ENST00000362461 102 ntBASIC6.4□□□□□ -1.38
PMS1P54277 RNA5SP500-201ENST00000364486 119 ntBASIC6.4□□□□□ -1.38
PMS1P54277 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
PMS1P54277 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC6.4□□□□□ -1.38
PMS1P54277 RNU6-98P-201ENST00000384173 107 ntBASIC6.4□□□□□ -1.38
PMS1P54277 ATP5F1P4-201ENST00000397288 746 ntBASIC6.4□□□□□ -1.38
PMS1P54277 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
PMS1P54277 SNORA11C-201ENST00000408532 129 ntBASIC6.4□□□□□ -1.38
PMS1P54277 RNA5SP431-201ENST00000410312 120 ntBASIC6.4□□□□□ -1.38
PMS1P54277 RN7SKP29-201ENST00000410957 272 ntBASIC6.4□□□□□ -1.38
PMS1P54277 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC6.4□□□□□ -1.38
PMS1P54277 AL161449.1-201ENST00000414531 1199 ntBASIC6.4□□□□□ -1.38
PMS1P54277 CDK8P2-201ENST00000415020 547 ntBASIC6.4□□□□□ -1.38
PMS1P54277 METTL15P3-201ENST00000415522 1221 ntBASIC6.4□□□□□ -1.38
PMS1P54277 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC6.4□□□□□ -1.38
PMS1P54277 PRUNEP1-201ENST00000425846 705 ntBASIC6.4□□□□□ -1.38
PMS1P54277 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC6.4□□□□□ -1.38
PMS1P54277 USP9YP35-201ENST00000435696 412 ntBASIC6.4□□□□□ -1.38
PMS1P54277 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC6.4□□□□□ -1.38
PMS1P54277 DNAJC19P5-201ENST00000443295 316 ntBASIC6.4□□□□□ -1.38
PMS1P54277 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC6.4□□□□□ -1.38
PMS1P54277 IGBP1P3-201ENST00000447449 1000 ntBASIC6.4□□□□□ -1.38
PMS1P54277 RPL36AP33-201ENST00000450395 310 ntBASIC6.4□□□□□ -1.38
PMS1P54277 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC6.4□□□□□ -1.38
PMS1P54277 PNPLA4P1-201ENST00000458328 305 ntBASIC6.4□□□□□ -1.38
PMS1P54277 AC098847.1-201ENST00000473094 348 ntBASIC6.4□□□□□ -1.38
PMS1P54277 AC116337.2-201ENST00000477662 156 ntBASIC6.4□□□□□ -1.38
PMS1P54277 AC092865.4-201ENST00000477936 615 ntBASIC6.4□□□□□ -1.38
PMS1P54277 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
PMS1P54277 RN7SL284P-201ENST00000498823 275 ntBASIC6.4□□□□□ -1.38
PMS1P54277 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
PMS1P54277 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
PMS1P54277 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
PMS1P54277 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC6.4□□□□□ -1.38
PMS1P54277 ATP1B1P1-201ENST00000509767 915 ntBASIC6.4□□□□□ -1.38
PMS1P54277 RPL7L1P4-201ENST00000513004 707 ntBASIC6.4□□□□□ -1.38
PMS1P54277 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
PMS1P54277 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC6.4□□□□□ -1.38
PMS1P54277 RN7SKP183-201ENST00000517169 324 ntBASIC6.4□□□□□ -1.38
PMS1P54277 AC136777.2-201ENST00000522979 358 ntBASIC6.4□□□□□ -1.38
PMS1P54277 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC6.4□□□□□ -1.38
PMS1P54277 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC6.4□□□□□ -1.38
PMS1P54277 OTX2-203ENST00000554559 715 ntTSL 5 BASIC6.4□□□□□ -1.38
PMS1P54277 AC245505.1-201ENST00000556398 224 ntBASIC6.4□□□□□ -1.38
PMS1P54277 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC6.4□□□□□ -1.38
PMS1P54277 AL512347.1-201ENST00000566420 503 ntBASIC6.4□□□□□ -1.38
PMS1P54277 MIR4776-2-201ENST00000580204 80 ntBASIC6.4□□□□□ -1.38
PMS1P54277 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
PMS1P54277 ABBA01006766.1-201ENST00000584728 294 ntBASIC6.4□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms