Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 RNA5SP428-201ENST00000365129 132 ntBASIC5.11□□□□□ -1.59
LIMK1P53667 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
LIMK1P53667 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC5.11□□□□□ -1.59
LIMK1P53667 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
LIMK1P53667 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
LIMK1P53667 SNX10-203ENST00000409367 746 ntTSL 5 BASIC5.11□□□□□ -1.59
LIMK1P53667 RNA5SP113-201ENST00000410486 84 ntBASIC5.11□□□□□ -1.59
LIMK1P53667 RN7SKP222-201ENST00000410651 315 ntBASIC5.11□□□□□ -1.59
LIMK1P53667 RANP4-201ENST00000413361 655 ntBASIC5.11□□□□□ -1.59
LIMK1P53667 COX5BP7-201ENST00000414780 274 ntBASIC5.11□□□□□ -1.59
LIMK1P53667 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5.11□□□□□ -1.59
LIMK1P53667 RPS27AP7-201ENST00000422792 455 ntBASIC5.11□□□□□ -1.59
LIMK1P53667 MTND4P24-201ENST00000424002 397 ntBASIC5.11□□□□□ -1.59
LIMK1P53667 RPL12P34-201ENST00000424532 479 ntBASIC5.11□□□□□ -1.59
LIMK1P53667 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC5.11□□□□□ -1.59
LIMK1P53667 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.11□□□□□ -1.59
LIMK1P53667 NDUFA5P10-201ENST00000432147 357 ntBASIC5.11□□□□□ -1.59
LIMK1P53667 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.11□□□□□ -1.59
LIMK1P53667 ZNF965P-201ENST00000432501 817 ntBASIC5.11□□□□□ -1.59
LIMK1P53667 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.11□□□□□ -1.59
LIMK1P53667 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.11□□□□□ -1.59
LIMK1P53667 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.11□□□□□ -1.59
LIMK1P53667 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.11□□□□□ -1.59
LIMK1P53667 AC021660.1-201ENST00000465006 554 ntBASIC5.11□□□□□ -1.59
LIMK1P53667 AC092754.1-201ENST00000472975 479 ntBASIC5.11□□□□□ -1.59
LIMK1P53667 AC011005.3-201ENST00000491624 395 ntBASIC5.11□□□□□ -1.59
LIMK1P53667 GAPDHP56-201ENST00000506031 988 ntBASIC5.11□□□□□ -1.59
LIMK1P53667 COX6B1P5-201ENST00000509843 249 ntBASIC5.11□□□□□ -1.59
LIMK1P53667 RN7SKP122-201ENST00000515923 296 ntBASIC5.11□□□□□ -1.59
LIMK1P53667 RNU6-513P-201ENST00000516104 104 ntBASIC5.11□□□□□ -1.59
LIMK1P53667 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC5.11□□□□□ -1.59
LIMK1P53667 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
LIMK1P53667 OR7E128P-201ENST00000532736 1024 ntBASIC5.11□□□□□ -1.59
LIMK1P53667 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.11□□□□□ -1.59
LIMK1P53667 NOP56P3-201ENST00000549457 385 ntBASIC5.11□□□□□ -1.59
LIMK1P53667 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.11□□□□□ -1.59
LIMK1P53667 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC5.11□□□□□ -1.59
LIMK1P53667 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.11□□□□□ -1.59
LIMK1P53667 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.11□□□□□ -1.59
LIMK1P53667 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.11□□□□□ -1.59
LIMK1P53667 MTCO3P22-201ENST00000603219 784 ntBASIC5.11□□□□□ -1.59
LIMK1P53667 PSMA6P4-201ENST00000603247 718 ntBASIC5.11□□□□□ -1.59
LIMK1P53667 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.11□□□□□ -1.59
LIMK1P53667 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
LIMK1P53667 MEMO1P5-201ENST00000604810 406 ntBASIC5.11□□□□□ -1.59
LIMK1P53667 AC135803.1-201ENST00000608748 565 ntBASIC5.11□□□□□ -1.59
LIMK1P53667 BNIP3P41-202ENST00000616656 861 ntBASIC5.11□□□□□ -1.59
LIMK1P53667 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC5.11□□□□□ -1.59
LIMK1P53667 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.11□□□□□ -1.59
LIMK1P53667 FRG1EP-201ENST00000634469 770 ntBASIC5.11□□□□□ -1.59
LIMK1P53667 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LIMK1P53667 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.11□□□□□ -1.59
LIMK1P53667 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.11□□□□□ -1.59
LIMK1P53667 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LIMK1P53667 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
LIMK1P53667 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.11□□□□□ -1.59
LIMK1P53667 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LIMK1P53667 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LIMK1P53667 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LIMK1P53667 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
LIMK1P53667 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.1□□□□□ -1.59
LIMK1P53667 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.1□□□□□ -1.59
LIMK1P53667 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.1□□□□□ -1.59
LIMK1P53667 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.1□□□□□ -1.59
LIMK1P53667 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
LIMK1P53667 SNORD51.1-201ENST00000365405 77 ntBASIC5.1□□□□□ -1.59
LIMK1P53667 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
LIMK1P53667 RNA5SP332-201ENST00000391063 115 ntBASIC5.1□□□□□ -1.59
LIMK1P53667 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC5.1□□□□□ -1.59
LIMK1P53667 AC048351.1-201ENST00000420064 602 ntBASIC5.1□□□□□ -1.59
LIMK1P53667 AL358176.3-201ENST00000420757 454 ntBASIC5.1□□□□□ -1.59
LIMK1P53667 EI24P4-201ENST00000423683 1078 ntBASIC5.1□□□□□ -1.59
LIMK1P53667 RIMKLBP2-201ENST00000424737 654 ntBASIC5.1□□□□□ -1.59
LIMK1P53667 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC5.1□□□□□ -1.59
LIMK1P53667 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC5.1□□□□□ -1.59
LIMK1P53667 RHOT1P3-201ENST00000436571 331 ntBASIC5.1□□□□□ -1.59
LIMK1P53667 MTCYBP12-201ENST00000440559 1134 ntBASIC5.1□□□□□ -1.59
LIMK1P53667 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.1□□□□□ -1.59
LIMK1P53667 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.1□□□□□ -1.59
LIMK1P53667 AC017099.1-201ENST00000448261 1028 ntBASIC5.1□□□□□ -1.59
LIMK1P53667 OR52E3P-201ENST00000452083 936 ntBASIC5.1□□□□□ -1.59
LIMK1P53667 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
LIMK1P53667 MTND6P6-201ENST00000478031 263 ntBASIC5.1□□□□□ -1.59
LIMK1P53667 SUMO1P1-201ENST00000497904 306 ntBASIC5.1□□□□□ -1.59
LIMK1P53667 AC093720.1-201ENST00000505681 714 ntBASIC5.1□□□□□ -1.59
LIMK1P53667 AC093824.1-201ENST00000508796 343 ntBASIC5.1□□□□□ -1.59
LIMK1P53667 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC5.1□□□□□ -1.59
LIMK1P53667 AC021193.1-201ENST00000511607 420 ntBASIC5.1□□□□□ -1.59
LIMK1P53667 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC5.1□□□□□ -1.59
LIMK1P53667 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.1□□□□□ -1.59
LIMK1P53667 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.1□□□□□ -1.59
LIMK1P53667 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.1□□□□□ -1.59
LIMK1P53667 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.1□□□□□ -1.59
LIMK1P53667 AC027369.5-201ENST00000533838 755 ntBASIC5.1□□□□□ -1.59
LIMK1P53667 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.1□□□□□ -1.59
LIMK1P53667 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.1□□□□□ -1.59
LIMK1P53667 AC027176.2-201ENST00000559166 746 ntBASIC5.1□□□□□ -1.59
LIMK1P53667 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
LIMK1P53667 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
LIMK1P53667 AL034549.2-201ENST00000618285 3373 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms