Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
MSH6P52701 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
MSH6P52701 VN1R37P-201ENST00000419096 748 ntBASIC6.33□□□□□ -1.4
MSH6P52701 RPL37P1-201ENST00000432310 284 ntBASIC6.33□□□□□ -1.4
MSH6P52701 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC6.33□□□□□ -1.4
MSH6P52701 VN1R105P-201ENST00000486595 910 ntBASIC6.33□□□□□ -1.4
MSH6P52701 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC6.33□□□□□ -1.4
MSH6P52701 F11-205ENST00000492972 1204 ntTSL 2 BASIC6.33□□□□□ -1.4
MSH6P52701 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
MSH6P52701 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
MSH6P52701 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC6.33□□□□□ -1.4
MSH6P52701 AC006349.1-201ENST00000555526 235 ntBASIC6.33□□□□□ -1.4
MSH6P52701 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC6.33□□□□□ -1.4
MSH6P52701 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC6.33□□□□□ -1.4
MSH6P52701 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
MSH6P52701 OR51H2P-202ENST00000641424 3046 ntBASIC6.33□□□□□ -1.4
MSH6P52701 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
MSH6P52701 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC6.33□□□□□ -1.4
MSH6P52701 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
MSH6P52701 AC083843.2-201ENST00000568248 6253 ntBASIC6.33□□□□□ -1.4
MSH6P52701 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
MSH6P52701 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
MSH6P52701 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
MSH6P52701 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC6.33□□□□□ -1.4
MSH6P52701 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
MSH6P52701 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
MSH6P52701 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
MSH6P52701 AC008033.1-201ENST00000216407 1162 ntBASIC6.32□□□□□ -1.4
MSH6P52701 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
MSH6P52701 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC6.32□□□□□ -1.4
MSH6P52701 RNA5SP187-201ENST00000384400 119 ntBASIC6.32□□□□□ -1.4
MSH6P52701 AL161909.1-201ENST00000397390 712 ntBASIC6.32□□□□□ -1.4
MSH6P52701 SCP2-206ENST00000430330 938 ntTSL 2 BASIC6.32□□□□□ -1.4
MSH6P52701 DHFRP3-201ENST00000455595 559 ntBASIC6.32□□□□□ -1.4
MSH6P52701 AC098799.3-201ENST00000506095 438 ntBASIC6.32□□□□□ -1.4
MSH6P52701 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC6.32□□□□□ -1.4
MSH6P52701 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC6.32□□□□□ -1.4
MSH6P52701 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC6.32□□□□□ -1.4
MSH6P52701 BNIP3P11-201ENST00000603878 563 ntBASIC6.32□□□□□ -1.4
MSH6P52701 MIR6875-201ENST00000617506 72 ntBASIC6.32□□□□□ -1.4
MSH6P52701 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC6.32□□□□□ -1.4
MSH6P52701 AC006065.6-201ENST00000625201 545 ntBASIC6.32□□□□□ -1.4
MSH6P52701 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
MSH6P52701 AC006453.5-201ENST00000636451 619 ntBASIC6.32□□□□□ -1.4
MSH6P52701 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
MSH6P52701 AC135352.1-201ENST00000506173 1418 ntBASIC6.32□□□□□ -1.4
MSH6P52701 AC027228.2-201ENST00000567141 2154 ntBASIC6.32□□□□□ -1.4
MSH6P52701 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC6.32□□□□□ -1.4
MSH6P52701 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC6.32□□□□□ -1.4
MSH6P52701 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC6.32□□□□□ -1.4
MSH6P52701 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
MSH6P52701 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
MSH6P52701 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
MSH6P52701 PEX12P1-201ENST00000400284 1048 ntBASIC6.31□□□□□ -1.4
MSH6P52701 AL035696.2-201ENST00000407941 709 ntBASIC6.31□□□□□ -1.4
MSH6P52701 RPL6P5-201ENST00000445678 828 ntBASIC6.31□□□□□ -1.4
MSH6P52701 RPS27AP13-201ENST00000498403 237 ntBASIC6.31□□□□□ -1.4
MSH6P52701 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC6.31□□□□□ -1.4
MSH6P52701 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC6.31□□□□□ -1.4
MSH6P52701 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC6.31□□□□□ -1.4
MSH6P52701 AC026726.1-201ENST00000512859 601 ntBASIC6.31□□□□□ -1.4
MSH6P52701 NPM1P41-201ENST00000512920 831 ntBASIC6.31□□□□□ -1.4
MSH6P52701 AC020634.1-201ENST00000608701 549 ntBASIC6.31□□□□□ -1.4
MSH6P52701 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC6.31□□□□□ -1.4
MSH6P52701 PCA3_2.1-201ENST00000612507 409 ntBASIC6.31□□□□□ -1.4
MSH6P52701 AC140479.6-201ENST00000633535 357 ntBASIC6.31□□□□□ -1.4
MSH6P52701 LINC01808-202ENST00000641680 1116 ntBASIC6.31□□□□□ -1.4
MSH6P52701 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
MSH6P52701 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
MSH6P52701 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC6.31□□□□□ -1.4
MSH6P52701 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
MSH6P52701 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
MSH6P52701 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC6.31□□□□□ -1.4
MSH6P52701 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC6.31□□□□□ -1.4
MSH6P52701 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC6.31□□□□□ -1.4
MSH6P52701 AL121950.1-201ENST00000624993 2077 ntBASIC6.31□□□□□ -1.4
MSH6P52701 MIR449B-201ENST00000384995 97 ntBASIC6.31□□□□□ -1.4
MSH6P52701 BX119904.3-201ENST00000428194 957 ntBASIC6.31□□□□□ -1.4
MSH6P52701 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC6.31□□□□□ -1.4
MSH6P52701 AL162151.2-201ENST00000448875 158 ntBASIC6.31□□□□□ -1.4
MSH6P52701 TPT1P3-201ENST00000492841 512 ntBASIC6.31□□□□□ -1.4
MSH6P52701 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC6.31□□□□□ -1.4
MSH6P52701 RNA5SP230-201ENST00000517039 122 ntBASIC6.31□□□□□ -1.4
MSH6P52701 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC6.31□□□□□ -1.4
MSH6P52701 AP001804.2-201ENST00000533932 910 ntBASIC6.31□□□□□ -1.4
MSH6P52701 NELL2-211ENST00000548826 559 ntTSL 2 BASIC6.31□□□□□ -1.4
MSH6P52701 HNRNPCP4-201ENST00000571636 900 ntBASIC6.31□□□□□ -1.4
MSH6P52701 AC053481.4-201ENST00000583164 216 ntBASIC6.31□□□□□ -1.4
MSH6P52701 AC002069.2-201ENST00000603580 883 ntBASIC6.31□□□□□ -1.4
MSH6P52701 AC069200.1-201ENST00000609511 323 ntBASIC6.31□□□□□ -1.4
MSH6P52701 uc_338.13-201ENST00000618243 179 ntBASIC6.31□□□□□ -1.4
MSH6P52701 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
MSH6P52701 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
MSH6P52701 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
MSH6P52701 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
MSH6P52701 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC6.3□□□□□ -1.4
MSH6P52701 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC6.3□□□□□ -1.4
MSH6P52701 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC6.3□□□□□ -1.4
MSH6P52701 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
MSH6P52701 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 139.8 ms