Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
HNF4AP41235 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HNF4AP41235 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.94□□□□□ -1.62
HNF4AP41235 RARSP1-201ENST00000542842 1418 ntBASIC4.94□□□□□ -1.62
HNF4AP41235 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.94□□□□□ -1.62
HNF4AP41235 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.94□□□□□ -1.62
HNF4AP41235 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HNF4AP41235 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
HNF4AP41235 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HNF4AP41235 AC000123.3-201ENST00000624029 4975 ntBASIC4.93□□□□□ -1.62
HNF4AP41235 AC009501.3-201ENST00000605001 1352 ntBASIC4.93□□□□□ -1.62
HNF4AP41235 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.93□□□□□ -1.62
HNF4AP41235 PANDAR-201ENST00000629595 1506 ntBASIC4.93□□□□□ -1.62
HNF4AP41235 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HNF4AP41235 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
HNF4AP41235 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.93□□□□□ -1.62
HNF4AP41235 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.93□□□□□ -1.62
HNF4AP41235 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
HNF4AP41235 AL031119.1-201ENST00000404707 1879 ntBASIC4.93□□□□□ -1.62
HNF4AP41235 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.93□□□□□ -1.62
HNF4AP41235 AC104333.2-201ENST00000422630 192 ntBASIC4.93□□□□□ -1.62
HNF4AP41235 AC092447.2-201ENST00000435487 669 ntBASIC4.93□□□□□ -1.62
HNF4AP41235 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.93□□□□□ -1.62
HNF4AP41235 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC4.93□□□□□ -1.62
HNF4AP41235 ZNF736P1Y-201ENST00000440402 1276 ntBASIC4.93□□□□□ -1.62
HNF4AP41235 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.93□□□□□ -1.62
HNF4AP41235 MRPL35P2-201ENST00000448009 511 ntBASIC4.93□□□□□ -1.62
HNF4AP41235 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC4.93□□□□□ -1.62
HNF4AP41235 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HNF4AP41235 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.93□□□□□ -1.62
HNF4AP41235 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC4.93□□□□□ -1.62
HNF4AP41235 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.93□□□□□ -1.62
HNF4AP41235 RNA5SP34-201ENST00000516887 130 ntBASIC4.93□□□□□ -1.62
HNF4AP41235 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC4.93□□□□□ -1.62
HNF4AP41235 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC4.93□□□□□ -1.62
HNF4AP41235 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC4.93□□□□□ -1.62
HNF4AP41235 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.93□□□□□ -1.62
HNF4AP41235 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC4.93□□□□□ -1.62
HNF4AP41235 AL731537.2-201ENST00000561565 951 ntBASIC4.93□□□□□ -1.62
HNF4AP41235 CBX3P2-202ENST00000583365 535 ntBASIC4.93□□□□□ -1.62
HNF4AP41235 AC005242.1-201ENST00000585658 438 ntBASIC4.93□□□□□ -1.62
HNF4AP41235 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC4.93□□□□□ -1.62
HNF4AP41235 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.93□□□□□ -1.62
HNF4AP41235 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.93□□□□□ -1.62
HNF4AP41235 AC092474.3-201ENST00000603022 568 ntBASIC4.93□□□□□ -1.62
HNF4AP41235 AC015849.2-201ENST00000605738 409 ntBASIC4.93□□□□□ -1.62
HNF4AP41235 AP005432.2-201ENST00000608162 586 ntBASIC4.93□□□□□ -1.62
HNF4AP41235 RPSAP73-201ENST00000614820 330 ntBASIC4.93□□□□□ -1.62
HNF4AP41235 AC091948.2-201ENST00000636510 279 ntBASIC4.93□□□□□ -1.62
HNF4AP41235 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.93□□□□□ -1.62
HNF4AP41235 AC006042.3-201ENST00000454684 1469 ntBASIC4.93□□□□□ -1.62
HNF4AP41235 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.93□□□□□ -1.62
HNF4AP41235 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HNF4AP41235 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
HNF4AP41235 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HNF4AP41235 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.93□□□□□ -1.62
HNF4AP41235 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HNF4AP41235 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
HNF4AP41235 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.93□□□□□ -1.62
HNF4AP41235 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
HNF4AP41235 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
HNF4AP41235 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
HNF4AP41235 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
HNF4AP41235 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
HNF4AP41235 AC091046.3-201ENST00000631455 1574 ntBASIC4.92□□□□□ -1.62
HNF4AP41235 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
HNF4AP41235 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.92□□□□□ -1.62
HNF4AP41235 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
HNF4AP41235 AMELX-201ENST00000348912 737 ntTSL 5 BASIC4.92□□□□□ -1.62
HNF4AP41235 SNORD115-48-201ENST00000364764 76 ntBASIC4.92□□□□□ -1.62
HNF4AP41235 MRRF-207ENST00000373729 870 ntTSL 3 BASIC4.92□□□□□ -1.62
HNF4AP41235 U3.32-201ENST00000408116 212 ntBASIC4.92□□□□□ -1.62
HNF4AP41235 RN7SKP16-201ENST00000410180 299 ntBASIC4.92□□□□□ -1.62
HNF4AP41235 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.92□□□□□ -1.62
HNF4AP41235 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC4.92□□□□□ -1.62
HNF4AP41235 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.92□□□□□ -1.62
HNF4AP41235 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
HNF4AP41235 CR848007.2-201ENST00000424918 787 ntBASIC4.92□□□□□ -1.62
HNF4AP41235 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC4.92□□□□□ -1.62
HNF4AP41235 CNOT7P2-201ENST00000441051 832 ntBASIC4.92□□□□□ -1.62
HNF4AP41235 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.92□□□□□ -1.62
HNF4AP41235 NFU1-207ENST00000462320 558 ntTSL 4 BASIC4.92□□□□□ -1.62
HNF4AP41235 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.92□□□□□ -1.62
HNF4AP41235 RN7SL222P-201ENST00000476452 299 ntBASIC4.92□□□□□ -1.62
HNF4AP41235 RN7SL346P-201ENST00000491561 294 ntBASIC4.92□□□□□ -1.62
HNF4AP41235 RPL37AP8-201ENST00000494116 276 ntBASIC4.92□□□□□ -1.62
HNF4AP41235 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.92□□□□□ -1.62
HNF4AP41235 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC4.92□□□□□ -1.62
HNF4AP41235 AC010285.3-201ENST00000511668 676 ntBASIC4.92□□□□□ -1.62
HNF4AP41235 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC4.92□□□□□ -1.62
HNF4AP41235 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC4.92□□□□□ -1.62
HNF4AP41235 AC105031.1-201ENST00000518550 476 ntBASIC4.92□□□□□ -1.62
HNF4AP41235 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC4.92□□□□□ -1.62
HNF4AP41235 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.92□□□□□ -1.62
HNF4AP41235 OR4A46P-201ENST00000527255 933 ntBASIC4.92□□□□□ -1.62
HNF4AP41235 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC4.92□□□□□ -1.62
HNF4AP41235 AL512310.9-201ENST00000553311 948 ntBASIC4.92□□□□□ -1.62
HNF4AP41235 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.92□□□□□ -1.62
HNF4AP41235 MIR3691-201ENST00000578066 90 ntBASIC4.92□□□□□ -1.62
HNF4AP41235 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms