Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.35□□□□□ -1.55
HOXD13P35453 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HOXD13P35453 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HOXD13P35453 ZNF736P6Y-201ENST00000447526 1213 ntBASIC5.35□□□□□ -1.55
HOXD13P35453 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC5.35□□□□□ -1.55
HOXD13P35453 AC026348.1-201ENST00000462549 1053 ntBASIC5.35□□□□□ -1.55
HOXD13P35453 AC078857.1-201ENST00000469870 667 ntBASIC5.35□□□□□ -1.55
HOXD13P35453 METTL15P1-201ENST00000481421 1045 ntBASIC5.35□□□□□ -1.55
HOXD13P35453 AC090686.1-201ENST00000481577 749 ntBASIC5.35□□□□□ -1.55
HOXD13P35453 AC093270.2-201ENST00000486157 792 ntBASIC5.35□□□□□ -1.55
HOXD13P35453 COX6B1P2-201ENST00000489624 230 ntBASIC5.35□□□□□ -1.55
HOXD13P35453 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC5.35□□□□□ -1.55
HOXD13P35453 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC5.35□□□□□ -1.55
HOXD13P35453 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.35□□□□□ -1.55
HOXD13P35453 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.35□□□□□ -1.55
HOXD13P35453 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.35□□□□□ -1.55
HOXD13P35453 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.35□□□□□ -1.55
HOXD13P35453 AC093249.4-201ENST00000564755 259 ntBASIC5.35□□□□□ -1.55
HOXD13P35453 CYCSP40-201ENST00000575927 294 ntBASIC5.35□□□□□ -1.55
HOXD13P35453 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC5.35□□□□□ -1.55
HOXD13P35453 ADAD1P2-201ENST00000588476 646 ntBASIC5.35□□□□□ -1.55
HOXD13P35453 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC5.35□□□□□ -1.55
HOXD13P35453 VN1R84P-201ENST00000593697 235 ntBASIC5.35□□□□□ -1.55
HOXD13P35453 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC5.35□□□□□ -1.55
HOXD13P35453 AC087783.2-201ENST00000605070 562 ntBASIC5.35□□□□□ -1.55
HOXD13P35453 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC5.35□□□□□ -1.55
HOXD13P35453 AP001521.2-201ENST00000608772 546 ntBASIC5.35□□□□□ -1.55
HOXD13P35453 EIF3FP1-201ENST00000613970 806 ntBASIC5.35□□□□□ -1.55
HOXD13P35453 AC139769.3-201ENST00000618383 175 ntBASIC5.35□□□□□ -1.55
HOXD13P35453 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.35□□□□□ -1.55
HOXD13P35453 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.35□□□□□ -1.55
HOXD13P35453 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.35□□□□□ -1.55
HOXD13P35453 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HOXD13P35453 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.35□□□□□ -1.55
HOXD13P35453 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.35□□□□□ -1.55
HOXD13P35453 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.35□□□□□ -1.55
HOXD13P35453 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HOXD13P35453 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HOXD13P35453 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.34□□□□□ -1.55
HOXD13P35453 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
HOXD13P35453 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
HOXD13P35453 AL445437.1-201ENST00000623157 3087 ntBASIC5.34□□□□□ -1.55
HOXD13P35453 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
HOXD13P35453 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
HOXD13P35453 MIR105-2-201ENST00000385083 81 ntBASIC5.34□□□□□ -1.55
HOXD13P35453 AC005522.1-201ENST00000395416 346 ntBASIC5.34□□□□□ -1.55
HOXD13P35453 Z97832.1-201ENST00000402490 328 ntBASIC5.34□□□□□ -1.55
HOXD13P35453 AL021331.1-201ENST00000402817 582 ntBASIC5.34□□□□□ -1.55
HOXD13P35453 AC233289.1-201ENST00000403700 508 ntBASIC5.34□□□□□ -1.55
HOXD13P35453 ARL4AP5-201ENST00000404372 599 ntBASIC5.34□□□□□ -1.55
HOXD13P35453 CTSL3P-202ENST00000412179 788 ntBASIC5.34□□□□□ -1.55
HOXD13P35453 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.34□□□□□ -1.55
HOXD13P35453 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.34□□□□□ -1.55
HOXD13P35453 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.34□□□□□ -1.55
HOXD13P35453 AC097499.1-201ENST00000444277 208 ntBASIC5.34□□□□□ -1.55
HOXD13P35453 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5.34□□□□□ -1.55
HOXD13P35453 RNU6-1218P-201ENST00000458990 108 ntBASIC5.34□□□□□ -1.55
HOXD13P35453 RPS20P4-201ENST00000461659 355 ntBASIC5.34□□□□□ -1.55
HOXD13P35453 RN7SL558P-201ENST00000497468 299 ntBASIC5.34□□□□□ -1.55
HOXD13P35453 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC5.34□□□□□ -1.55
HOXD13P35453 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC5.34□□□□□ -1.55
HOXD13P35453 AC027308.1-201ENST00000517993 110 ntBASIC5.34□□□□□ -1.55
HOXD13P35453 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.34□□□□□ -1.55
HOXD13P35453 IGHVIII-38-1-201ENST00000521454 282 ntBASIC5.34□□□□□ -1.55
HOXD13P35453 LECT2-205ENST00000522943 574 ntTSL 3 BASIC5.34□□□□□ -1.55
HOXD13P35453 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC5.34□□□□□ -1.55
HOXD13P35453 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC5.34□□□□□ -1.55
HOXD13P35453 OR4R2P-201ENST00000530815 597 ntBASIC5.34□□□□□ -1.55
HOXD13P35453 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.34□□□□□ -1.55
HOXD13P35453 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC5.34□□□□□ -1.55
HOXD13P35453 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
HOXD13P35453 AC044860.2-201ENST00000561005 179 ntBASIC5.34□□□□□ -1.55
HOXD13P35453 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.34□□□□□ -1.55
HOXD13P35453 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC5.34□□□□□ -1.55
HOXD13P35453 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.34□□□□□ -1.55
HOXD13P35453 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC5.34□□□□□ -1.55
HOXD13P35453 AC079880.2-201ENST00000603790 1213 ntBASIC5.34□□□□□ -1.55
HOXD13P35453 AC013244.1-201ENST00000604279 193 ntBASIC5.34□□□□□ -1.55
HOXD13P35453 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC5.34□□□□□ -1.55
HOXD13P35453 AC090510.2-201ENST00000617465 629 ntBASIC5.34□□□□□ -1.55
HOXD13P35453 AL353662.3-201ENST00000625131 237 ntBASIC5.34□□□□□ -1.55
HOXD13P35453 SMG1P6-201ENST00000532337 2930 ntBASIC5.34□□□□□ -1.55
HOXD13P35453 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
HOXD13P35453 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
HOXD13P35453 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HOXD13P35453 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC5.33□□□□□ -1.56
HOXD13P35453 AC009229.4-201ENST00000623854 1947 ntBASIC5.33□□□□□ -1.56
HOXD13P35453 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.33□□□□□ -1.56
HOXD13P35453 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HOXD13P35453 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
HOXD13P35453 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HOXD13P35453 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
HOXD13P35453 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
HOXD13P35453 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
HOXD13P35453 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
HOXD13P35453 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HOXD13P35453 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HOXD13P35453 AP000357.1-201ENST00000409926 1165 ntBASIC5.33□□□□□ -1.56
HOXD13P35453 AC010385.1-201ENST00000412374 256 ntBASIC5.33□□□□□ -1.56
HOXD13P35453 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms