Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
HOXC13P31276 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HOXC13P31276 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
HOXC13P31276 AL034370.1-201ENST00000397254 1590 ntBASIC5.27□□□□□ -1.57
HOXC13P31276 U3.32-201ENST00000408116 212 ntBASIC5.27□□□□□ -1.57
HOXC13P31276 RN7SKP16-201ENST00000410180 299 ntBASIC5.27□□□□□ -1.57
HOXC13P31276 RN7SKP114-201ENST00000410327 279 ntBASIC5.27□□□□□ -1.57
HOXC13P31276 AC004074.1-201ENST00000421810 1063 ntBASIC5.27□□□□□ -1.57
HOXC13P31276 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.27□□□□□ -1.57
HOXC13P31276 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
HOXC13P31276 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
HOXC13P31276 NDUFA5P10-201ENST00000432147 357 ntBASIC5.27□□□□□ -1.57
HOXC13P31276 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC5.27□□□□□ -1.57
HOXC13P31276 AC092447.2-201ENST00000435487 669 ntBASIC5.27□□□□□ -1.57
HOXC13P31276 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC5.27□□□□□ -1.57
HOXC13P31276 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.27□□□□□ -1.57
HOXC13P31276 AC010683.1-201ENST00000473673 378 ntBASIC5.27□□□□□ -1.57
HOXC13P31276 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.27□□□□□ -1.57
HOXC13P31276 RN7SL441P-201ENST00000492388 296 ntBASIC5.27□□□□□ -1.57
HOXC13P31276 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.27□□□□□ -1.57
HOXC13P31276 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.27□□□□□ -1.57
HOXC13P31276 RNU6-347P-201ENST00000516658 105 ntBASIC5.27□□□□□ -1.57
HOXC13P31276 AC100784.1-201ENST00000522790 310 ntBASIC5.27□□□□□ -1.57
HOXC13P31276 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
HOXC13P31276 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.27□□□□□ -1.57
HOXC13P31276 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
HOXC13P31276 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.27□□□□□ -1.57
HOXC13P31276 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC5.27□□□□□ -1.57
HOXC13P31276 AC017076.1-201ENST00000607613 578 ntBASIC5.27□□□□□ -1.57
HOXC13P31276 AP000240.1-201ENST00000609910 452 ntBASIC5.27□□□□□ -1.57
HOXC13P31276 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HOXC13P31276 AL118556.2-201ENST00000614375 824 ntBASIC5.27□□□□□ -1.57
HOXC13P31276 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.27□□□□□ -1.57
HOXC13P31276 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
HOXC13P31276 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
HOXC13P31276 AC017002.4-201ENST00000604721 1525 ntBASIC5.27□□□□□ -1.57
HOXC13P31276 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HOXC13P31276 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.27□□□□□ -1.57
HOXC13P31276 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HOXC13P31276 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HOXC13P31276 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HOXC13P31276 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.26□□□□□ -1.57
HOXC13P31276 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.26□□□□□ -1.57
HOXC13P31276 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.26□□□□□ -1.57
HOXC13P31276 VN2R3P-201ENST00000422626 1412 ntBASIC5.26□□□□□ -1.57
HOXC13P31276 DDX6P1-205ENST00000441966 1436 ntBASIC5.26□□□□□ -1.57
HOXC13P31276 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.26□□□□□ -1.57
HOXC13P31276 RNA5SP428-201ENST00000365129 132 ntBASIC5.26□□□□□ -1.57
HOXC13P31276 SNORA2.3-201ENST00000383920 135 ntBASIC5.26□□□□□ -1.57
HOXC13P31276 RNU6-31P-201ENST00000384388 108 ntBASIC5.26□□□□□ -1.57
HOXC13P31276 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.26□□□□□ -1.57
HOXC13P31276 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.26□□□□□ -1.57
HOXC13P31276 AC069213.2-201ENST00000420238 366 ntBASIC5.26□□□□□ -1.57
HOXC13P31276 COX6CP17-201ENST00000421389 185 ntBASIC5.26□□□□□ -1.57
HOXC13P31276 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.26□□□□□ -1.57
HOXC13P31276 FAM204CP-201ENST00000424489 642 ntBASIC5.26□□□□□ -1.57
HOXC13P31276 CR848007.2-201ENST00000424918 787 ntBASIC5.26□□□□□ -1.57
HOXC13P31276 BX323845.1-201ENST00000432417 179 ntBASIC5.26□□□□□ -1.57
HOXC13P31276 RSL24D1P8-201ENST00000434442 492 ntBASIC5.26□□□□□ -1.57
HOXC13P31276 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.26□□□□□ -1.57
HOXC13P31276 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC5.26□□□□□ -1.57
HOXC13P31276 AC073648.4-201ENST00000442655 781 ntBASIC5.26□□□□□ -1.57
HOXC13P31276 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.26□□□□□ -1.57
HOXC13P31276 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC5.26□□□□□ -1.57
HOXC13P31276 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC5.26□□□□□ -1.57
HOXC13P31276 NDUFAF4P3-201ENST00000456468 525 ntBASIC5.26□□□□□ -1.57
HOXC13P31276 AC005229.2-201ENST00000456995 399 ntBASIC5.26□□□□□ -1.57
HOXC13P31276 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC5.26□□□□□ -1.57
HOXC13P31276 AC021660.1-201ENST00000465006 554 ntBASIC5.26□□□□□ -1.57
HOXC13P31276 RPL5P30-201ENST00000465511 891 ntBASIC5.26□□□□□ -1.57
HOXC13P31276 NDUFA5P9-201ENST00000472609 340 ntBASIC5.26□□□□□ -1.57
HOXC13P31276 RN7SL481P-201ENST00000477764 299 ntBASIC5.26□□□□□ -1.57
HOXC13P31276 OR52A4P-202ENST00000481634 799 ntBASIC5.26□□□□□ -1.57
HOXC13P31276 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC5.26□□□□□ -1.57
HOXC13P31276 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.26□□□□□ -1.57
HOXC13P31276 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.26□□□□□ -1.57
HOXC13P31276 HMGB1P3-201ENST00000502802 616 ntBASIC5.26□□□□□ -1.57
HOXC13P31276 AC093770.1-201ENST00000511559 571 ntBASIC5.26□□□□□ -1.57
HOXC13P31276 SNORD116-26-201ENST00000516006 96 ntBASIC5.26□□□□□ -1.57
HOXC13P31276 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC5.26□□□□□ -1.57
HOXC13P31276 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC5.26□□□□□ -1.57
HOXC13P31276 C1GALT1P3-201ENST00000522049 819 ntBASIC5.26□□□□□ -1.57
HOXC13P31276 AP006289.1-201ENST00000538089 277 ntBASIC5.26□□□□□ -1.57
HOXC13P31276 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC5.26□□□□□ -1.57
HOXC13P31276 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC5.26□□□□□ -1.57
HOXC13P31276 AL133445.2-201ENST00000611191 527 ntBASIC5.26□□□□□ -1.57
HOXC13P31276 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.26□□□□□ -1.57
HOXC13P31276 AC104307.1-201ENST00000616142 196 ntBASIC5.26□□□□□ -1.57
HOXC13P31276 AC123768.4-201ENST00000616244 701 ntBASIC5.26□□□□□ -1.57
HOXC13P31276 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
HOXC13P31276 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
HOXC13P31276 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HOXC13P31276 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HOXC13P31276 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.26□□□□□ -1.57
HOXC13P31276 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
HOXC13P31276 AC002525.1-201ENST00000624392 1622 ntBASIC5.26□□□□□ -1.57
HOXC13P31276 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HOXC13P31276 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HOXC13P31276 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HOXC13P31276 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms