Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC7.02□□□□□ -1.29
CLIP1P30622 AC091167.1-201ENST00000492017 396 ntBASIC7.02□□□□□ -1.29
CLIP1P30622 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
CLIP1P30622 AC138938.1-201ENST00000515431 782 ntBASIC7.02□□□□□ -1.29
CLIP1P30622 RNA5SP315-201ENST00000516340 116 ntBASIC7.02□□□□□ -1.29
CLIP1P30622 RNA5SP312-201ENST00000517068 116 ntBASIC7.02□□□□□ -1.29
CLIP1P30622 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC7.02□□□□□ -1.29
CLIP1P30622 AP003730.1-201ENST00000524605 285 ntBASIC7.02□□□□□ -1.29
CLIP1P30622 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC7.02□□□□□ -1.29
CLIP1P30622 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
CLIP1P30622 RNF138P2-201ENST00000603490 592 ntBASIC7.02□□□□□ -1.29
CLIP1P30622 AL160290.3-201ENST00000604869 165 ntBASIC7.02□□□□□ -1.29
CLIP1P30622 AC245389.2-201ENST00000616023 576 ntBASIC7.02□□□□□ -1.29
CLIP1P30622 AC242843.1-201ENST00000618702 573 ntBASIC7.02□□□□□ -1.29
CLIP1P30622 AL445363.3-201ENST00000623080 671 ntBASIC7.02□□□□□ -1.29
CLIP1P30622 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC7.02□□□□□ -1.29
CLIP1P30622 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC7.02□□□□□ -1.29
CLIP1P30622 MIR492-201ENST00000638676 116 ntBASIC7.02□□□□□ -1.29
CLIP1P30622 MFSD8-242ENST00000641690 4199 ntBASIC7.02□□□□□ -1.29
CLIP1P30622 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
CLIP1P30622 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
CLIP1P30622 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
CLIP1P30622 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
CLIP1P30622 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC7.02□□□□□ -1.29
CLIP1P30622 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC7.02□□□□□ -1.29
CLIP1P30622 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
CLIP1P30622 AL121657.1-201ENST00000327215 531 ntBASIC7.01□□□□□ -1.29
CLIP1P30622 RNA5SP307-201ENST00000362863 116 ntBASIC7.01□□□□□ -1.29
CLIP1P30622 RNU1-132P-201ENST00000364300 164 ntBASIC7.01□□□□□ -1.29
CLIP1P30622 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC7.01□□□□□ -1.29
CLIP1P30622 NRBF2P2-201ENST00000413087 861 ntBASIC7.01□□□□□ -1.29
CLIP1P30622 SLC4A1APP1-201ENST00000419995 602 ntBASIC7.01□□□□□ -1.29
CLIP1P30622 AL158073.1-201ENST00000426848 1104 ntBASIC7.01□□□□□ -1.29
CLIP1P30622 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC7.01□□□□□ -1.29
CLIP1P30622 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC7.01□□□□□ -1.29
CLIP1P30622 DDX39BP2-208ENST00000453923 258 ntBASIC7.01□□□□□ -1.29
CLIP1P30622 ATP5G1P3-201ENST00000463301 410 ntBASIC7.01□□□□□ -1.29
CLIP1P30622 AL591473.1-201ENST00000464297 313 ntBASIC7.01□□□□□ -1.29
CLIP1P30622 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
CLIP1P30622 USP9YP2-201ENST00000504503 1000 ntBASIC7.01□□□□□ -1.29
CLIP1P30622 AC108475.1-201ENST00000507880 950 ntBASIC7.01□□□□□ -1.29
CLIP1P30622 USP9YP1-201ENST00000513521 1002 ntBASIC7.01□□□□□ -1.29
CLIP1P30622 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC7.01□□□□□ -1.29
CLIP1P30622 RPL23AP97-201ENST00000568955 471 ntBASIC7.01□□□□□ -1.29
CLIP1P30622 AL023881.1-201ENST00000621088 301 ntBASIC7.01□□□□□ -1.29
CLIP1P30622 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
CLIP1P30622 AC007546.2-201ENST00000623996 360 ntBASIC7.01□□□□□ -1.29
CLIP1P30622 AL139254.3-201ENST00000641097 674 ntBASIC7.01□□□□□ -1.29
CLIP1P30622 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC7.01□□□□□ -1.29
CLIP1P30622 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC7.01□□□□□ -1.29
CLIP1P30622 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC7.01□□□□□ -1.29
CLIP1P30622 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC7.01□□□□□ -1.29
CLIP1P30622 MIR383-201ENST00000362257 73 ntBASIC7.01□□□□□ -1.29
CLIP1P30622 SNORA37-201ENST00000384504 129 ntBASIC7.01□□□□□ -1.29
CLIP1P30622 AMZ2P2-201ENST00000406819 1057 ntBASIC7.01□□□□□ -1.29
CLIP1P30622 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
CLIP1P30622 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC7.01□□□□□ -1.29
CLIP1P30622 OR4C10P-201ENST00000434991 931 ntBASIC7.01□□□□□ -1.29
CLIP1P30622 EEF1A1P1-201ENST00000447052 739 ntBASIC7.01□□□□□ -1.29
CLIP1P30622 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC7.01□□□□□ -1.29
CLIP1P30622 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC7.01□□□□□ -1.29
CLIP1P30622 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC7.01□□□□□ -1.29
CLIP1P30622 AC025884.1-201ENST00000556034 378 ntBASIC7.01□□□□□ -1.29
CLIP1P30622 AC106785.1-201ENST00000565935 262 ntBASIC7.01□□□□□ -1.29
CLIP1P30622 AC005034.4-201ENST00000603612 899 ntBASIC7.01□□□□□ -1.29
CLIP1P30622 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC7.01□□□□□ -1.29
CLIP1P30622 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
CLIP1P30622 MIR3653-201ENST00000625572 110 ntBASIC7.01□□□□□ -1.29
CLIP1P30622 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
CLIP1P30622 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC7□□□□□ -1.29
CLIP1P30622 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC7□□□□□ -1.29
CLIP1P30622 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC7□□□□□ -1.29
CLIP1P30622 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC7□□□□□ -1.29
CLIP1P30622 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC7□□□□□ -1.29
CLIP1P30622 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
CLIP1P30622 MIR134-201ENST00000385258 73 ntBASIC7□□□□□ -1.29
CLIP1P30622 SNORD96B-201ENST00000386148 79 ntBASIC7□□□□□ -1.29
CLIP1P30622 SNORA11F-201ENST00000408237 128 ntBASIC7□□□□□ -1.29
CLIP1P30622 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC7□□□□□ -1.29
CLIP1P30622 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC7□□□□□ -1.29
CLIP1P30622 RPL35P6-201ENST00000490024 372 ntBASIC7□□□□□ -1.29
CLIP1P30622 ATP6V1G1P6-201ENST00000504007 334 ntBASIC7□□□□□ -1.29
CLIP1P30622 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC7□□□□□ -1.29
CLIP1P30622 PCAT14-202ENST00000627127 3935 ntBASIC7□□□□□ -1.29
CLIP1P30622 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
CLIP1P30622 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
CLIP1P30622 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
CLIP1P30622 AL158163.1-201ENST00000603915 1649 ntBASIC6.99□□□□□ -1.29
CLIP1P30622 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
CLIP1P30622 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
CLIP1P30622 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC6.99□□□□□ -1.29
CLIP1P30622 AL672167.1-203ENST00000641299 2975 ntBASIC6.99□□□□□ -1.29
CLIP1P30622 AL672167.1-205ENST00000641112 3080 ntBASIC6.99□□□□□ -1.29
CLIP1P30622 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC6.99□□□□□ -1.29
CLIP1P30622 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
CLIP1P30622 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
CLIP1P30622 RPS20P14-201ENST00000412545 360 ntBASIC6.99□□□□□ -1.29
CLIP1P30622 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC6.99□□□□□ -1.29
CLIP1P30622 MFSD13B-201ENST00000420133 1290 ntBASIC6.99□□□□□ -1.29
CLIP1P30622 AL359073.1-201ENST00000448036 403 ntBASIC6.99□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms