Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 EIF1-207ENST00000591776 797 ntTSL 4 BASIC7.2□□□□□ -1.26
VARSP26640 AC007938.3-201ENST00000604965 623 ntBASIC7.2□□□□□ -1.26
VARSP26640 ELMO2P1-201ENST00000611569 473 ntTSL 5 BASIC7.2□□□□□ -1.26
VARSP26640 XPNPEP3-206ENST00000614001 230 ntTSL 5 BASIC7.2□□□□□ -1.26
VARSP26640 AC009318.4-201ENST00000620496 486 ntBASIC7.2□□□□□ -1.26
VARSP26640 AC244517.12-201ENST00000623581 663 ntBASIC7.2□□□□□ -1.26
VARSP26640 AC079597.1-201ENST00000624306 508 ntBASIC7.2□□□□□ -1.26
VARSP26640 AC110079.2-202ENST00000629093 698 ntTSL 3 BASIC7.2□□□□□ -1.26
VARSP26640 SNORA43.5-201ENST00000631270 138 ntBASIC7.2□□□□□ -1.26
VARSP26640 WBP11P1-201ENST00000562560 1931 ntBASIC7.2□□□□□ -1.26
VARSP26640 FYB1-210ENST00000515010 2578 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
VARSP26640 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
VARSP26640 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
VARSP26640 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC7.2□□□□□ -1.26
VARSP26640 MAPK10-242ENST00000639242 3088 ntAPPRIS P2 TSL 5 BASIC7.2□□□□□ -1.26
VARSP26640 STN1-202ENST00000369764 1311 ntAPPRIS P1 TSL 2 BASIC7.2□□□□□ -1.26
VARSP26640 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC7.2□□□□□ -1.26
VARSP26640 ACTR3BP2-202ENST00000623630 1338 ntBASIC7.2□□□□□ -1.26
VARSP26640 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
VARSP26640 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC7.2□□□□□ -1.26
VARSP26640 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC7.2□□□□□ -1.26
VARSP26640 CCR3-202ENST00000395940 1581 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
VARSP26640 CD163-202ENST00000396620 3800 ntAPPRIS ALT2 TSL 2 BASIC7.2□□□□□ -1.26
VARSP26640 LPAL2-203ENST00000454031 2498 ntBASIC7.2□□□□□ -1.26
VARSP26640 RGPD1-201ENST00000398193 5425 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
VARSP26640 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
VARSP26640 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
VARSP26640 AC138915.4-201ENST00000565549 4147 ntBASIC7.2□□□□□ -1.26
VARSP26640 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC7.2□□□□□ -1.26
VARSP26640 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC7.19□□□□□ -1.26
VARSP26640 AC007731.1-202ENST00000610338 1870 ntTSL 5 BASIC7.19□□□□□ -1.26
VARSP26640 CCT8P1-201ENST00000413611 1657 ntBASIC7.19□□□□□ -1.26
VARSP26640 CCDC77-210ENST00000540180 1652 ntAPPRIS ALT2 TSL 2 BASIC7.19□□□□□ -1.26
VARSP26640 SRFBP1-201ENST00000339397 2855 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
VARSP26640 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
VARSP26640 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
VARSP26640 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC7.19□□□□□ -1.26
VARSP26640 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC7.19□□□□□ -1.26
VARSP26640 SNRPEP3-201ENST00000338402 276 ntBASIC7.19□□□□□ -1.26
VARSP26640 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
VARSP26640 RNU6-666P-201ENST00000363499 107 ntBASIC7.19□□□□□ -1.26
VARSP26640 RNU6-289P-201ENST00000364093 107 ntBASIC7.19□□□□□ -1.26
VARSP26640 SNORA63.7-201ENST00000365579 123 ntBASIC7.19□□□□□ -1.26
VARSP26640 PARD3-204ENST00000374768 799 ntTSL 3 BASIC7.19□□□□□ -1.26
VARSP26640 SSX6-201ENST00000376932 562 ntBASIC7.19□□□□□ -1.26
VARSP26640 MTCYBP4-201ENST00000401524 249 ntBASIC7.19□□□□□ -1.26
VARSP26640 AL591416.1-201ENST00000404015 867 ntBASIC7.19□□□□□ -1.26
VARSP26640 ZNF37CP-201ENST00000406795 241 ntBASIC7.19□□□□□ -1.26
VARSP26640 RNU6-1304P-201ENST00000411374 106 ntBASIC7.19□□□□□ -1.26
VARSP26640 AF274855.1-201ENST00000411474 850 ntTSL 3 BASIC7.19□□□□□ -1.26
VARSP26640 SNX18P13-201ENST00000412442 529 ntBASIC7.19□□□□□ -1.26
VARSP26640 AL139135.1-201ENST00000412675 209 ntBASIC7.19□□□□□ -1.26
VARSP26640 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
VARSP26640 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
VARSP26640 AC138207.1-201ENST00000442757 545 ntTSL 3 BASIC7.19□□□□□ -1.26
VARSP26640 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC7.19□□□□□ -1.26
VARSP26640 PARD3-AS1-201ENST00000446211 302 ntTSL 2 BASIC7.19□□□□□ -1.26
VARSP26640 IGKV1OR2-2-201ENST00000451163 355 ntBASIC7.19□□□□□ -1.26
VARSP26640 CACYBPP2-201ENST00000453625 678 ntBASIC7.19□□□□□ -1.26
VARSP26640 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC7.19□□□□□ -1.26
VARSP26640 CMAHP-203ENST00000458373 1101 ntTSL 5 BASIC7.19□□□□□ -1.26
VARSP26640 RNU7-152P-201ENST00000458982 64 ntBASIC7.19□□□□□ -1.26
VARSP26640 AC007547.1-201ENST00000462177 490 ntBASIC7.19□□□□□ -1.26
VARSP26640 AC078785.3-201ENST00000476607 425 ntBASIC7.19□□□□□ -1.26
VARSP26640 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC7.19□□□□□ -1.26
VARSP26640 AC009153.1-201ENST00000485799 496 ntBASIC7.19□□□□□ -1.26
VARSP26640 AC010587.1-201ENST00000505809 469 ntBASIC7.19□□□□□ -1.26
VARSP26640 AC093303.1-201ENST00000514549 295 ntBASIC7.19□□□□□ -1.26
VARSP26640 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC7.19□□□□□ -1.26
VARSP26640 IGKV2-29-201ENST00000521304 372 ntBASIC7.19□□□□□ -1.26
VARSP26640 AP005902.1-201ENST00000521358 186 ntBASIC7.19□□□□□ -1.26
VARSP26640 COPS8P3-201ENST00000526024 482 ntBASIC7.19□□□□□ -1.26
VARSP26640 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
VARSP26640 PCNAP4-201ENST00000532690 730 ntBASIC7.19□□□□□ -1.26
VARSP26640 AC078860.1-201ENST00000546601 527 ntTSL 2 BASIC7.19□□□□□ -1.26
VARSP26640 LINC00640-201ENST00000554409 498 ntTSL 3 BASIC7.19□□□□□ -1.26
VARSP26640 AC010653.1-201ENST00000571108 881 ntBASIC7.19□□□□□ -1.26
VARSP26640 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC7.19□□□□□ -1.26
VARSP26640 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC7.19□□□□□ -1.26
VARSP26640 CYP2C61P-201ENST00000604072 290 ntBASIC7.19□□□□□ -1.26
VARSP26640 AL591686.2-201ENST00000608241 475 ntTSL 4 BASIC7.19□□□□□ -1.26
VARSP26640 AC099494.2-201ENST00000623371 978 ntBASIC7.19□□□□□ -1.26
VARSP26640 AL359757.2-201ENST00000624309 274 ntBASIC7.19□□□□□ -1.26
VARSP26640 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC7.19□□□□□ -1.26
VARSP26640 AC119674.1-212ENST00000641155 993 ntBASIC7.19□□□□□ -1.26
VARSP26640 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
VARSP26640 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC7.19□□□□□ -1.26
VARSP26640 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
VARSP26640 MFSD4BP1-201ENST00000513330 1552 ntBASIC7.19□□□□□ -1.26
VARSP26640 AL133320.1-201ENST00000621423 2352 ntBASIC7.19□□□□□ -1.26
VARSP26640 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC7.19□□□□□ -1.26
VARSP26640 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
VARSP26640 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
VARSP26640 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC7.19□□□□□ -1.26
VARSP26640 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
VARSP26640 CEP41-213ENST00000489512 3161 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
VARSP26640 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC7.18□□□□□ -1.26
VARSP26640 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
VARSP26640 OFD1P17-201ENST00000437639 3018 ntBASIC7.18□□□□□ -1.26
VARSP26640 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC7.18□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 134.5 ms