Protein–RNA interactions for Protein: P25940

COL5A3, Collagen alpha-3(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,745 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3P25940 AC004777.1-201ENST00000624317 287 ntBASIC5.48□□□□□ -1.53
COL5A3P25940 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.48□□□□□ -1.53
COL5A3P25940 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.48□□□□□ -1.53
COL5A3P25940 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
COL5A3P25940 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC5.47□□□□□ -1.53
COL5A3P25940 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.47□□□□□ -1.53
COL5A3P25940 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.47□□□□□ -1.53
COL5A3P25940 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
COL5A3P25940 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
COL5A3P25940 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
COL5A3P25940 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
COL5A3P25940 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
COL5A3P25940 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
COL5A3P25940 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC5.47□□□□□ -1.53
COL5A3P25940 AL607077.1-201ENST00000401718 499 ntBASIC5.47□□□□□ -1.53
COL5A3P25940 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.47□□□□□ -1.53
COL5A3P25940 AC115285.1-201ENST00000424879 736 ntBASIC5.47□□□□□ -1.53
COL5A3P25940 CDY14P-201ENST00000431260 1014 ntBASIC5.47□□□□□ -1.53
COL5A3P25940 CDY12P-201ENST00000440679 1015 ntBASIC5.47□□□□□ -1.53
COL5A3P25940 CDY13P-201ENST00000445813 1015 ntBASIC5.47□□□□□ -1.53
COL5A3P25940 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.47□□□□□ -1.53
COL5A3P25940 CDY23P-201ENST00000451661 1014 ntBASIC5.47□□□□□ -1.53
COL5A3P25940 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.47□□□□□ -1.53
COL5A3P25940 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC5.47□□□□□ -1.53
COL5A3P25940 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC5.47□□□□□ -1.53
COL5A3P25940 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
COL5A3P25940 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC5.47□□□□□ -1.53
COL5A3P25940 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC5.47□□□□□ -1.53
COL5A3P25940 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC5.47□□□□□ -1.53
COL5A3P25940 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
COL5A3P25940 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
COL5A3P25940 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
COL5A3P25940 AC068870.3-201ENST00000625077 2536 ntBASIC5.47□□□□□ -1.53
COL5A3P25940 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
COL5A3P25940 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
COL5A3P25940 AC106871.1-201ENST00000568324 3102 ntBASIC5.47□□□□□ -1.53
COL5A3P25940 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.47□□□□□ -1.53
COL5A3P25940 AC140134.1-201ENST00000511830 3544 ntBASIC5.46□□□□□ -1.53
COL5A3P25940 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5.46□□□□□ -1.53
COL5A3P25940 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
COL5A3P25940 TCP11X1-202ENST00000622971 1372 ntBASIC5.46□□□□□ -1.53
COL5A3P25940 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.53
COL5A3P25940 RNA5SP387-201ENST00000364226 106 ntBASIC5.46□□□□□ -1.54
COL5A3P25940 AP000357.1-201ENST00000409926 1165 ntBASIC5.46□□□□□ -1.54
COL5A3P25940 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
COL5A3P25940 SERPINA7P1-201ENST00000443077 631 ntBASIC5.46□□□□□ -1.54
COL5A3P25940 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.46□□□□□ -1.54
COL5A3P25940 AF213884.1-201ENST00000488102 463 ntBASIC5.46□□□□□ -1.54
COL5A3P25940 KCTD9P2-201ENST00000512203 1013 ntBASIC5.46□□□□□ -1.54
COL5A3P25940 RNA5SP360-201ENST00000516555 118 ntBASIC5.46□□□□□ -1.54
COL5A3P25940 OR7E10P-201ENST00000526420 991 ntBASIC5.46□□□□□ -1.54
COL5A3P25940 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.54
COL5A3P25940 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC5.46□□□□□ -1.54
COL5A3P25940 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC5.46□□□□□ -1.54
COL5A3P25940 RPL23AP97-201ENST00000568955 471 ntBASIC5.46□□□□□ -1.54
COL5A3P25940 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.46□□□□□ -1.54
COL5A3P25940 AC091178.1-203ENST00000584586 279 ntBASIC5.46□□□□□ -1.54
COL5A3P25940 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC5.46□□□□□ -1.54
COL5A3P25940 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.46□□□□□ -1.54
COL5A3P25940 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
COL5A3P25940 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.46□□□□□ -1.54
COL5A3P25940 BCORP1-203ENST00000513194 5093 ntBASIC5.46□□□□□ -1.54
COL5A3P25940 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
COL5A3P25940 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
COL5A3P25940 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
COL5A3P25940 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC5.46□□□□□ -1.54
COL5A3P25940 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
COL5A3P25940 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
COL5A3P25940 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
COL5A3P25940 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC5.46□□□□□ -1.54
COL5A3P25940 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
COL5A3P25940 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.46□□□□□ -1.54
COL5A3P25940 OR11H4-201ENST00000315409 1082 ntBASIC5.45□□□□□ -1.54
COL5A3P25940 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC5.45□□□□□ -1.54
COL5A3P25940 GCA-203ENST00000429691 824 ntTSL 3 BASIC5.45□□□□□ -1.54
COL5A3P25940 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC5.45□□□□□ -1.54
COL5A3P25940 AC007389.2-201ENST00000434630 306 ntBASIC5.45□□□□□ -1.54
COL5A3P25940 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC5.45□□□□□ -1.54
COL5A3P25940 RPL5P32-201ENST00000454085 879 ntBASIC5.45□□□□□ -1.54
COL5A3P25940 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
COL5A3P25940 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC5.45□□□□□ -1.54
COL5A3P25940 TRMT10BP1-201ENST00000519377 943 ntBASIC5.45□□□□□ -1.54
COL5A3P25940 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC5.45□□□□□ -1.54
COL5A3P25940 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.45□□□□□ -1.54
COL5A3P25940 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
COL5A3P25940 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
COL5A3P25940 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
COL5A3P25940 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.45□□□□□ -1.54
COL5A3P25940 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
COL5A3P25940 CCAT2-201ENST00000630920 1752 ntBASIC5.45□□□□□ -1.54
COL5A3P25940 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
COL5A3P25940 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
COL5A3P25940 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
COL5A3P25940 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.45□□□□□ -1.54
COL5A3P25940 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
COL5A3P25940 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC5.45□□□□□ -1.54
COL5A3P25940 STAG1-202ENST00000383202 6055 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
COL5A3P25940 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC5.45□□□□□ -1.54
COL5A3P25940 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
COL5A3P25940 ATP5F1P3-201ENST00000397213 657 ntBASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms