Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 NUDT19P3-201ENST00000404698 555 ntBASIC5.51□□□□□ -1.53
BDNFP23560 MIR1182-201ENST00000408363 97 ntBASIC5.51□□□□□ -1.53
BDNFP23560 MORF4L1P7-201ENST00000426038 703 ntBASIC5.51□□□□□ -1.53
BDNFP23560 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.51□□□□□ -1.53
BDNFP23560 AC073508.1-201ENST00000428866 656 ntBASIC5.51□□□□□ -1.53
BDNFP23560 CEACAMP7-201ENST00000444105 496 ntBASIC5.51□□□□□ -1.53
BDNFP23560 RPL6P5-201ENST00000445678 828 ntBASIC5.51□□□□□ -1.53
BDNFP23560 AC073850.1-201ENST00000449243 255 ntBASIC5.51□□□□□ -1.53
BDNFP23560 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC5.51□□□□□ -1.53
BDNFP23560 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.51□□□□□ -1.53
BDNFP23560 AC108161.1-201ENST00000461060 402 ntBASIC5.51□□□□□ -1.53
BDNFP23560 RN7SL610P-201ENST00000463845 291 ntBASIC5.51□□□□□ -1.53
BDNFP23560 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.51□□□□□ -1.53
BDNFP23560 AC006427.1-201ENST00000514359 712 ntBASIC5.51□□□□□ -1.53
BDNFP23560 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.51□□□□□ -1.53
BDNFP23560 RNU6-513P-201ENST00000516104 104 ntBASIC5.51□□□□□ -1.53
BDNFP23560 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.51□□□□□ -1.53
BDNFP23560 AC022360.1-201ENST00000521058 340 ntBASIC5.51□□□□□ -1.53
BDNFP23560 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.51□□□□□ -1.53
BDNFP23560 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.51□□□□□ -1.53
BDNFP23560 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.51□□□□□ -1.53
BDNFP23560 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.51□□□□□ -1.53
BDNFP23560 AC125494.3-201ENST00000602759 455 ntBASIC5.51□□□□□ -1.53
BDNFP23560 AC011626.1-201ENST00000604710 562 ntBASIC5.51□□□□□ -1.53
BDNFP23560 AL392112.1-201ENST00000605115 829 ntBASIC5.51□□□□□ -1.53
BDNFP23560 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC5.51□□□□□ -1.53
BDNFP23560 BNIP3P41-202ENST00000616656 861 ntBASIC5.51□□□□□ -1.53
BDNFP23560 STMN1P1-201ENST00000617809 440 ntBASIC5.51□□□□□ -1.53
BDNFP23560 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.51□□□□□ -1.53
BDNFP23560 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.51□□□□□ -1.53
BDNFP23560 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
BDNFP23560 AC046144.1-201ENST00000478559 1853 ntBASIC5.51□□□□□ -1.53
BDNFP23560 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.51□□□□□ -1.53
BDNFP23560 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.51□□□□□ -1.53
BDNFP23560 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
BDNFP23560 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.5□□□□□ -1.53
BDNFP23560 SEC63P2-201ENST00000503863 1939 ntBASIC5.5□□□□□ -1.53
BDNFP23560 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC5.5□□□□□ -1.53
BDNFP23560 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
BDNFP23560 MAPK10-328ENST00000641553 4009 ntBASIC5.5□□□□□ -1.53
BDNFP23560 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
BDNFP23560 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
BDNFP23560 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC5.5□□□□□ -1.53
BDNFP23560 RNA5SP305-201ENST00000362665 119 ntBASIC5.5□□□□□ -1.53
BDNFP23560 RN7SKP153-201ENST00000365026 316 ntBASIC5.5□□□□□ -1.53
BDNFP23560 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
BDNFP23560 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
BDNFP23560 AC136624.1-201ENST00000400791 413 ntBASIC5.5□□□□□ -1.53
BDNFP23560 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.5□□□□□ -1.53
BDNFP23560 MIR1303-201ENST00000408625 86 ntBASIC5.5□□□□□ -1.53
BDNFP23560 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC5.5□□□□□ -1.53
BDNFP23560 AC114814.2-201ENST00000419195 485 ntBASIC5.5□□□□□ -1.53
BDNFP23560 AC093162.1-201ENST00000419682 124 ntBASIC5.5□□□□□ -1.53
BDNFP23560 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC5.5□□□□□ -1.53
BDNFP23560 OR5AW1P-201ENST00000426334 1006 ntBASIC5.5□□□□□ -1.53
BDNFP23560 AC005189.1-201ENST00000431286 310 ntBASIC5.5□□□□□ -1.53
BDNFP23560 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.5□□□□□ -1.53
BDNFP23560 RPS7P5-201ENST00000441482 581 ntBASIC5.5□□□□□ -1.53
BDNFP23560 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.5□□□□□ -1.53
BDNFP23560 RN7SL329P-201ENST00000467740 299 ntBASIC5.5□□□□□ -1.53
BDNFP23560 RN7SL189P-201ENST00000468631 289 ntBASIC5.5□□□□□ -1.53
BDNFP23560 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC5.5□□□□□ -1.53
BDNFP23560 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC5.5□□□□□ -1.53
BDNFP23560 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.5□□□□□ -1.53
BDNFP23560 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC5.5□□□□□ -1.53
BDNFP23560 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.5□□□□□ -1.53
BDNFP23560 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.5□□□□□ -1.53
BDNFP23560 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC5.5□□□□□ -1.53
BDNFP23560 AC092490.3-201ENST00000545370 572 ntBASIC5.5□□□□□ -1.53
BDNFP23560 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.5□□□□□ -1.53
BDNFP23560 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC5.5□□□□□ -1.53
BDNFP23560 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.5□□□□□ -1.53
BDNFP23560 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.5□□□□□ -1.53
BDNFP23560 RN7SL708P-201ENST00000580952 299 ntBASIC5.5□□□□□ -1.53
BDNFP23560 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.5□□□□□ -1.53
BDNFP23560 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.5□□□□□ -1.53
BDNFP23560 AC011447.4-201ENST00000587562 111 ntBASIC5.5□□□□□ -1.53
BDNFP23560 HMGB2P1-201ENST00000591146 634 ntBASIC5.5□□□□□ -1.53
BDNFP23560 NTAN1P1-201ENST00000603150 646 ntBASIC5.5□□□□□ -1.53
BDNFP23560 AC005034.4-201ENST00000603612 899 ntBASIC5.5□□□□□ -1.53
BDNFP23560 OR6R2P-201ENST00000609216 300 ntBASIC5.5□□□□□ -1.53
BDNFP23560 AC068870.2-201ENST00000620635 389 ntBASIC5.5□□□□□ -1.53
BDNFP23560 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.5□□□□□ -1.53
BDNFP23560 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
BDNFP23560 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.5□□□□□ -1.53
BDNFP23560 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
BDNFP23560 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.5□□□□□ -1.53
BDNFP23560 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
BDNFP23560 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
BDNFP23560 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.5□□□□□ -1.53
BDNFP23560 AL034549.2-201ENST00000618285 3373 ntBASIC5.49□□□□□ -1.53
BDNFP23560 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
BDNFP23560 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.49□□□□□ -1.53
BDNFP23560 HSPA8P18-201ENST00000439846 1928 ntBASIC5.49□□□□□ -1.53
BDNFP23560 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
BDNFP23560 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
BDNFP23560 RNU6-650P-201ENST00000365658 111 ntBASIC5.49□□□□□ -1.53
BDNFP23560 MIR589-201ENST00000385238 99 ntBASIC5.49□□□□□ -1.53
BDNFP23560 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
BDNFP23560 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms