Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC6.93□□□□□ -1.3
LIG1P18858 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC6.93□□□□□ -1.3
LIG1P18858 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC6.93□□□□□ -1.3
LIG1P18858 MRPS21P8-201ENST00000569196 235 ntBASIC6.93□□□□□ -1.3
LIG1P18858 MTCO1P40-201ENST00000574371 625 ntBASIC6.93□□□□□ -1.3
LIG1P18858 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC6.93□□□□□ -1.3
LIG1P18858 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC6.93□□□□□ -1.3
LIG1P18858 AP001542.2-201ENST00000593141 364 ntBASIC6.93□□□□□ -1.3
LIG1P18858 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
LIG1P18858 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC6.93□□□□□ -1.3
LIG1P18858 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC6.93□□□□□ -1.3
LIG1P18858 AC092354.1-201ENST00000606057 376 ntBASIC6.93□□□□□ -1.3
LIG1P18858 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC6.93□□□□□ -1.3
LIG1P18858 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
LIG1P18858 AC000095.2-202ENST00000637415 154 ntBASIC6.93□□□□□ -1.3
LIG1P18858 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC6.93□□□□□ -1.3
LIG1P18858 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
LIG1P18858 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
LIG1P18858 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC6.93□□□□□ -1.3
LIG1P18858 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
LIG1P18858 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC6.92□□□□□ -1.3
LIG1P18858 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC6.92□□□□□ -1.3
LIG1P18858 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC6.92□□□□□ -1.3
LIG1P18858 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC6.92□□□□□ -1.3
LIG1P18858 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC6.92□□□□□ -1.3
LIG1P18858 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC6.92□□□□□ -1.3
LIG1P18858 RNU6-1263P-201ENST00000384601 106 ntBASIC6.92□□□□□ -1.3
LIG1P18858 AC093719.1-202ENST00000392735 373 ntBASIC6.92□□□□□ -1.3
LIG1P18858 TAF9BP1-201ENST00000396646 746 ntBASIC6.92□□□□□ -1.3
LIG1P18858 SNORA11.5-201ENST00000408163 128 ntBASIC6.92□□□□□ -1.3
LIG1P18858 AL035422.1-201ENST00000414193 397 ntBASIC6.92□□□□□ -1.3
LIG1P18858 AC066692.1-201ENST00000421721 457 ntBASIC6.92□□□□□ -1.3
LIG1P18858 AKR1B10P1-201ENST00000425765 942 ntBASIC6.92□□□□□ -1.3
LIG1P18858 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.92□□□□□ -1.3
LIG1P18858 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
LIG1P18858 AC073410.1-201ENST00000435125 589 ntBASIC6.92□□□□□ -1.3
LIG1P18858 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC6.92□□□□□ -1.3
LIG1P18858 AC002542.1-201ENST00000440683 193 ntBASIC6.92□□□□□ -1.3
LIG1P18858 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC6.92□□□□□ -1.3
LIG1P18858 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC6.92□□□□□ -1.3
LIG1P18858 WASF1P1-201ENST00000447560 1131 ntBASIC6.92□□□□□ -1.3
LIG1P18858 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
LIG1P18858 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC6.92□□□□□ -1.3
LIG1P18858 AL358876.1-201ENST00000453364 1075 ntBASIC6.92□□□□□ -1.3
LIG1P18858 RN7SL254P-201ENST00000460609 284 ntBASIC6.92□□□□□ -1.3
LIG1P18858 RPL5P13-201ENST00000462840 709 ntBASIC6.92□□□□□ -1.3
LIG1P18858 RN7SL352P-201ENST00000466002 277 ntBASIC6.92□□□□□ -1.3
LIG1P18858 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
LIG1P18858 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC6.92□□□□□ -1.3
LIG1P18858 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
LIG1P18858 ST13P12-201ENST00000508958 1094 ntBASIC6.92□□□□□ -1.3
LIG1P18858 AC006499.4-201ENST00000510947 694 ntBASIC6.92□□□□□ -1.3
LIG1P18858 AC079395.1-201ENST00000510981 262 ntBASIC6.92□□□□□ -1.3
LIG1P18858 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC6.92□□□□□ -1.3
LIG1P18858 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC6.92□□□□□ -1.3
LIG1P18858 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC6.92□□□□□ -1.3
LIG1P18858 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC6.92□□□□□ -1.3
LIG1P18858 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.92□□□□□ -1.3
LIG1P18858 MIR6071-201ENST00000616741 78 ntBASIC6.92□□□□□ -1.3
LIG1P18858 RFPL4AP6-201ENST00000616792 846 ntBASIC6.92□□□□□ -1.3
LIG1P18858 AC104985.2-201ENST00000620598 500 ntBASIC6.92□□□□□ -1.3
LIG1P18858 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
LIG1P18858 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.92□□□□□ -1.3
LIG1P18858 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC6.92□□□□□ -1.3
LIG1P18858 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
LIG1P18858 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
LIG1P18858 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.92□□□□□ -1.3
LIG1P18858 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
LIG1P18858 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
LIG1P18858 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC6.92□□□□□ -1.3
LIG1P18858 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
LIG1P18858 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC6.91□□□□□ -1.3
LIG1P18858 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC6.91□□□□□ -1.3
LIG1P18858 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC6.91□□□□□ -1.3
LIG1P18858 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
LIG1P18858 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
LIG1P18858 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC6.91□□□□□ -1.3
LIG1P18858 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC6.91□□□□□ -1.3
LIG1P18858 AC140134.1-201ENST00000511830 3544 ntBASIC6.91□□□□□ -1.3
LIG1P18858 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC6.91□□□□□ -1.3
LIG1P18858 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
LIG1P18858 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
LIG1P18858 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.91□□□□□ -1.3
LIG1P18858 RNU4-91P-201ENST00000364778 135 ntBASIC6.91□□□□□ -1.3
LIG1P18858 RNU6-1042P-201ENST00000384204 107 ntBASIC6.91□□□□□ -1.3
LIG1P18858 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
LIG1P18858 PEX12P1-201ENST00000400284 1048 ntBASIC6.91□□□□□ -1.3
LIG1P18858 LINC01347-201ENST00000417964 355 ntBASIC6.91□□□□□ -1.3
LIG1P18858 OFD1P2Y-201ENST00000421895 1149 ntBASIC6.91□□□□□ -1.3
LIG1P18858 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC6.91□□□□□ -1.3
LIG1P18858 ISCA1P1-201ENST00000426679 387 ntBASIC6.91□□□□□ -1.3
LIG1P18858 AC115283.1-201ENST00000427353 400 ntBASIC6.91□□□□□ -1.3
LIG1P18858 AC104651.1-201ENST00000427559 735 ntBASIC6.91□□□□□ -1.3
LIG1P18858 ARL6IP1P2-201ENST00000431356 563 ntBASIC6.91□□□□□ -1.3
LIG1P18858 USP9YP31-201ENST00000431405 881 ntBASIC6.91□□□□□ -1.3
LIG1P18858 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC6.91□□□□□ -1.3
LIG1P18858 VN1R54P-201ENST00000435210 1049 ntBASIC6.91□□□□□ -1.3
LIG1P18858 UBE2V1P8-201ENST00000437166 265 ntBASIC6.91□□□□□ -1.3
LIG1P18858 USP9YP22-201ENST00000438971 294 ntBASIC6.91□□□□□ -1.3
LIG1P18858 AL138899.2-201ENST00000439139 499 ntBASIC6.91□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms