Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 RN7SL600P-201ENST00000581811 299 ntBASIC5.01□□□□□ -1.61
COL11A1P12107 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC5.01□□□□□ -1.61
COL11A1P12107 AC005520.3-201ENST00000602874 370 ntBASIC5.01□□□□□ -1.61
COL11A1P12107 Z98200.1-201ENST00000607298 470 ntBASIC5.01□□□□□ -1.61
COL11A1P12107 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.01□□□□□ -1.61
COL11A1P12107 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
COL11A1P12107 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
COL11A1P12107 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
COL11A1P12107 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
COL11A1P12107 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5□□□□□ -1.61
COL11A1P12107 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5□□□□□ -1.61
COL11A1P12107 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5□□□□□ -1.61
COL11A1P12107 CCL7-202ENST00000394627 696 ntTSL 3 BASIC5□□□□□ -1.61
COL11A1P12107 CASKP1-201ENST00000412870 582 ntBASIC5□□□□□ -1.61
COL11A1P12107 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5□□□□□ -1.61
COL11A1P12107 UBE2V1P3-201ENST00000439651 417 ntBASIC5□□□□□ -1.61
COL11A1P12107 RPL21P89-201ENST00000444021 467 ntBASIC5□□□□□ -1.61
COL11A1P12107 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC5□□□□□ -1.61
COL11A1P12107 AC044797.1-201ENST00000445744 679 ntBASIC5□□□□□ -1.61
COL11A1P12107 SNORA84-201ENST00000459229 133 ntBASIC5□□□□□ -1.61
COL11A1P12107 DEFB109A-201ENST00000482450 265 ntBASIC5□□□□□ -1.61
COL11A1P12107 AC069304.1-201ENST00000491593 704 ntBASIC5□□□□□ -1.61
COL11A1P12107 AC104164.2-201ENST00000496953 495 ntBASIC5□□□□□ -1.61
COL11A1P12107 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC5□□□□□ -1.61
COL11A1P12107 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC5□□□□□ -1.61
COL11A1P12107 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC5□□□□□ -1.61
COL11A1P12107 AC234782.5-201ENST00000617723 324 ntBASIC5□□□□□ -1.61
COL11A1P12107 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
COL11A1P12107 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC5□□□□□ -1.61
COL11A1P12107 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5□□□□□ -1.61
COL11A1P12107 AL603750.1-201ENST00000624216 1717 ntBASIC5□□□□□ -1.61
COL11A1P12107 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5□□□□□ -1.61
COL11A1P12107 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
COL11A1P12107 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5□□□□□ -1.61
COL11A1P12107 NXPH1-205ENST00000602349 1953 ntBASIC5□□□□□ -1.61
COL11A1P12107 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
COL11A1P12107 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
COL11A1P12107 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
COL11A1P12107 MIR372-201ENST00000362225 67 ntBASIC5□□□□□ -1.61
COL11A1P12107 RPL32P23-201ENST00000397237 405 ntBASIC5□□□□□ -1.61
COL11A1P12107 FCF1P5-201ENST00000406490 482 ntBASIC5□□□□□ -1.61
COL11A1P12107 AL035696.2-201ENST00000407941 709 ntBASIC5□□□□□ -1.61
COL11A1P12107 ARAFP1-201ENST00000422172 605 ntBASIC5□□□□□ -1.61
COL11A1P12107 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC5□□□□□ -1.61
COL11A1P12107 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5□□□□□ -1.61
COL11A1P12107 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC5□□□□□ -1.61
COL11A1P12107 RPL23AP37-201ENST00000479658 549 ntBASIC5□□□□□ -1.61
COL11A1P12107 RNA5SP519-201ENST00000516480 119 ntBASIC5□□□□□ -1.61
COL11A1P12107 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC5□□□□□ -1.61
COL11A1P12107 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC5□□□□□ -1.61
COL11A1P12107 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5□□□□□ -1.61
COL11A1P12107 AC006133.1-201ENST00000617106 264 ntBASIC5□□□□□ -1.61
COL11A1P12107 AL445363.3-201ENST00000623080 671 ntBASIC5□□□□□ -1.61
COL11A1P12107 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
COL11A1P12107 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.99□□□□□ -1.61
COL11A1P12107 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
COL11A1P12107 RUFY2-201ENST00000265865 2033 ntTSL 2 BASIC4.99□□□□□ -1.61
COL11A1P12107 RNU1-14P-201ENST00000362759 152 ntBASIC4.99□□□□□ -1.61
COL11A1P12107 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
COL11A1P12107 RNA5SP44-201ENST00000410446 133 ntBASIC4.99□□□□□ -1.61
COL11A1P12107 COX6B1P7-201ENST00000430845 235 ntBASIC4.99□□□□□ -1.61
COL11A1P12107 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.99□□□□□ -1.61
COL11A1P12107 NMNAT1P2-201ENST00000435192 860 ntBASIC4.99□□□□□ -1.61
COL11A1P12107 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.99□□□□□ -1.61
COL11A1P12107 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.99□□□□□ -1.61
COL11A1P12107 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC4.99□□□□□ -1.61
COL11A1P12107 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.99□□□□□ -1.61
COL11A1P12107 AC106785.1-201ENST00000565935 262 ntBASIC4.99□□□□□ -1.61
COL11A1P12107 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
COL11A1P12107 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC4.99□□□□□ -1.61
COL11A1P12107 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
COL11A1P12107 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
COL11A1P12107 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.98□□□□□ -1.61
COL11A1P12107 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
COL11A1P12107 AL731532.2-201ENST00000623542 1953 ntBASIC4.98□□□□□ -1.61
COL11A1P12107 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.98□□□□□ -1.61
COL11A1P12107 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC4.98□□□□□ -1.61
COL11A1P12107 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
COL11A1P12107 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
COL11A1P12107 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
COL11A1P12107 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.98□□□□□ -1.61
COL11A1P12107 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.98□□□□□ -1.61
COL11A1P12107 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.98□□□□□ -1.61
COL11A1P12107 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.98□□□□□ -1.61
COL11A1P12107 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.98□□□□□ -1.61
COL11A1P12107 AC006326.1-201ENST00000445465 787 ntBASIC4.98□□□□□ -1.61
COL11A1P12107 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC4.98□□□□□ -1.61
COL11A1P12107 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.98□□□□□ -1.61
COL11A1P12107 AF213884.1-201ENST00000488102 463 ntBASIC4.98□□□□□ -1.61
COL11A1P12107 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.98□□□□□ -1.61
COL11A1P12107 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.98□□□□□ -1.61
COL11A1P12107 PSMB7P1-201ENST00000556349 514 ntBASIC4.98□□□□□ -1.61
COL11A1P12107 MIR4429-201ENST00000580105 73 ntBASIC4.98□□□□□ -1.61
COL11A1P12107 AC022916.3-201ENST00000592961 742 ntBASIC4.98□□□□□ -1.61
COL11A1P12107 AC007546.2-201ENST00000623996 360 ntBASIC4.98□□□□□ -1.61
COL11A1P12107 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
COL11A1P12107 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC4.98□□□□□ -1.61
COL11A1P12107 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
COL11A1P12107 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
COL11A1P12107 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 166.9 ms