Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 TRIM60P8Y-201ENST00000436338 762 ntBASIC8.03□□□□□ -1.12
CSB-PGBD3P0DP91 MTND4LP16-201ENST00000440828 295 ntBASIC8.03□□□□□ -1.12
CSB-PGBD3P0DP91 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC8.03□□□□□ -1.12
CSB-PGBD3P0DP91 DNAJC19P8-201ENST00000452887 259 ntBASIC8.03□□□□□ -1.12
CSB-PGBD3P0DP91 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC8.03□□□□□ -1.12
CSB-PGBD3P0DP91 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC8.03□□□□□ -1.12
CSB-PGBD3P0DP91 AC073594.1-201ENST00000462065 364 ntBASIC8.03□□□□□ -1.12
CSB-PGBD3P0DP91 RN7SL799P-201ENST00000475891 298 ntBASIC8.03□□□□□ -1.12
CSB-PGBD3P0DP91 SIAH1P1-201ENST00000479411 923 ntBASIC8.03□□□□□ -1.12
CSB-PGBD3P0DP91 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC8.03□□□□□ -1.12
CSB-PGBD3P0DP91 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC8.03□□□□□ -1.12
CSB-PGBD3P0DP91 MTATP6P22-201ENST00000507369 598 ntBASIC8.03□□□□□ -1.12
CSB-PGBD3P0DP91 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC8.03□□□□□ -1.12
CSB-PGBD3P0DP91 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC8.03□□□□□ -1.12
CSB-PGBD3P0DP91 RNA5SP34-201ENST00000516887 130 ntBASIC8.03□□□□□ -1.12
CSB-PGBD3P0DP91 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC8.03□□□□□ -1.12
CSB-PGBD3P0DP91 NAP1L1P1-201ENST00000524793 1063 ntBASIC8.03□□□□□ -1.12
CSB-PGBD3P0DP91 OR8L1P-201ENST00000534005 955 ntBASIC8.03□□□□□ -1.12
CSB-PGBD3P0DP91 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC8.03□□□□□ -1.12
CSB-PGBD3P0DP91 AC073916.1-201ENST00000545095 130 ntBASIC8.03□□□□□ -1.12
CSB-PGBD3P0DP91 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
CSB-PGBD3P0DP91 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC8.03□□□□□ -1.12
CSB-PGBD3P0DP91 ROCK1P1-201ENST00000573767 549 ntBASIC8.03□□□□□ -1.12
CSB-PGBD3P0DP91 GMFG-212ENST00000602185 423 ntTSL 3 BASIC8.03□□□□□ -1.12
CSB-PGBD3P0DP91 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC8.03□□□□□ -1.12
CSB-PGBD3P0DP91 Y_RNA.804-201ENST00000615262 101 ntBASIC8.03□□□□□ -1.12
CSB-PGBD3P0DP91 AL121873.1-201ENST00000616013 524 ntBASIC8.03□□□□□ -1.12
CSB-PGBD3P0DP91 OR8G7P-201ENST00000616658 848 ntBASIC8.03□□□□□ -1.12
CSB-PGBD3P0DP91 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC8.03□□□□□ -1.12
CSB-PGBD3P0DP91 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC8.03□□□□□ -1.12
CSB-PGBD3P0DP91 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
CSB-PGBD3P0DP91 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC8.03□□□□□ -1.12
CSB-PGBD3P0DP91 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC8.03□□□□□ -1.12
CSB-PGBD3P0DP91 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
CSB-PGBD3P0DP91 AL359091.1-201ENST00000449048 1734 ntBASIC8.03□□□□□ -1.12
CSB-PGBD3P0DP91 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
CSB-PGBD3P0DP91 AC012078.1-201ENST00000405035 1646 ntBASIC8.03□□□□□ -1.12
CSB-PGBD3P0DP91 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
CSB-PGBD3P0DP91 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
CSB-PGBD3P0DP91 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC8.03□□□□□ -1.12
CSB-PGBD3P0DP91 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
CSB-PGBD3P0DP91 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC8.02□□□□□ -1.12
CSB-PGBD3P0DP91 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC8.02□□□□□ -1.13
CSB-PGBD3P0DP91 PARP4P1-201ENST00000435945 2337 ntBASIC8.02□□□□□ -1.13
CSB-PGBD3P0DP91 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC8.02□□□□□ -1.13
CSB-PGBD3P0DP91 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
CSB-PGBD3P0DP91 ZNF680P1-201ENST00000436625 1469 ntBASIC8.02□□□□□ -1.13
CSB-PGBD3P0DP91 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC8.02□□□□□ -1.13
CSB-PGBD3P0DP91 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
CSB-PGBD3P0DP91 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC8.02□□□□□ -1.13
CSB-PGBD3P0DP91 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
CSB-PGBD3P0DP91 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC8.02□□□□□ -1.13
CSB-PGBD3P0DP91 FGF7P2-201ENST00000332473 296 ntBASIC8.02□□□□□ -1.13
CSB-PGBD3P0DP91 IL6STP1-201ENST00000346911 1020 ntBASIC8.02□□□□□ -1.13
CSB-PGBD3P0DP91 RNA5SP46-201ENST00000362370 120 ntBASIC8.02□□□□□ -1.13
CSB-PGBD3P0DP91 RN7SKP162-201ENST00000363605 345 ntBASIC8.02□□□□□ -1.13
CSB-PGBD3P0DP91 RNA5SP394-201ENST00000364216 119 ntBASIC8.02□□□□□ -1.13
CSB-PGBD3P0DP91 SNORA75-201ENST00000384158 137 ntBASIC8.02□□□□□ -1.13
CSB-PGBD3P0DP91 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
CSB-PGBD3P0DP91 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
CSB-PGBD3P0DP91 MIR937-201ENST00000401271 86 ntBASIC8.02□□□□□ -1.13
CSB-PGBD3P0DP91 AC016739.1-201ENST00000405359 345 ntBASIC8.02□□□□□ -1.13
CSB-PGBD3P0DP91 RNU6-575P-201ENST00000411326 105 ntBASIC8.02□□□□□ -1.13
CSB-PGBD3P0DP91 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC8.02□□□□□ -1.13
CSB-PGBD3P0DP91 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC8.02□□□□□ -1.13
CSB-PGBD3P0DP91 FAM96AP1-201ENST00000430879 482 ntBASIC8.02□□□□□ -1.13
CSB-PGBD3P0DP91 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC8.02□□□□□ -1.13
CSB-PGBD3P0DP91 COX6CP2-201ENST00000444980 225 ntBASIC8.02□□□□□ -1.13
CSB-PGBD3P0DP91 EEF1B2P6-201ENST00000445713 673 ntBASIC8.02□□□□□ -1.13
CSB-PGBD3P0DP91 EIF4A1P6-201ENST00000448133 1210 ntBASIC8.02□□□□□ -1.13
CSB-PGBD3P0DP91 SBDSP1-204ENST00000453858 737 ntBASIC8.02□□□□□ -1.13
CSB-PGBD3P0DP91 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC8.02□□□□□ -1.13
CSB-PGBD3P0DP91 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC8.02□□□□□ -1.13
CSB-PGBD3P0DP91 AC073358.1-201ENST00000505671 684 ntBASIC8.02□□□□□ -1.13
CSB-PGBD3P0DP91 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC8.02□□□□□ -1.13
CSB-PGBD3P0DP91 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC8.02□□□□□ -1.13
CSB-PGBD3P0DP91 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC8.02□□□□□ -1.13
CSB-PGBD3P0DP91 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC8.02□□□□□ -1.13
CSB-PGBD3P0DP91 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC8.02□□□□□ -1.13
CSB-PGBD3P0DP91 TBCA-206ENST00000518338 551 ntTSL 2 BASIC8.02□□□□□ -1.13
CSB-PGBD3P0DP91 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC8.02□□□□□ -1.13
CSB-PGBD3P0DP91 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC8.02□□□□□ -1.13
CSB-PGBD3P0DP91 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC8.02□□□□□ -1.13
CSB-PGBD3P0DP91 OR6C7P-201ENST00000547875 934 ntBASIC8.02□□□□□ -1.13
CSB-PGBD3P0DP91 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC8.02□□□□□ -1.13
CSB-PGBD3P0DP91 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
CSB-PGBD3P0DP91 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC8.02□□□□□ -1.13
CSB-PGBD3P0DP91 MIR6730-201ENST00000622213 67 ntBASIC8.02□□□□□ -1.13
CSB-PGBD3P0DP91 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC8.02□□□□□ -1.13
CSB-PGBD3P0DP91 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC8.02□□□□□ -1.13
CSB-PGBD3P0DP91 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
CSB-PGBD3P0DP91 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
CSB-PGBD3P0DP91 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
CSB-PGBD3P0DP91 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC8.02□□□□□ -1.13
CSB-PGBD3P0DP91 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
CSB-PGBD3P0DP91 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
CSB-PGBD3P0DP91 AL354685.2-201ENST00000448218 1447 ntBASIC8.02□□□□□ -1.13
CSB-PGBD3P0DP91 AL157700.1-201ENST00000561973 1432 ntBASIC8.02□□□□□ -1.13
CSB-PGBD3P0DP91 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC8.02□□□□□ -1.13
CSB-PGBD3P0DP91 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms