Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 MIR6798-201ENST00000612887 67 ntBASIC4.55□□□□□ -1.68
HOXC4P09017 AL035461.2-201ENST00000619201 524 ntBASIC4.55□□□□□ -1.68
HOXC4P09017 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
HOXC4P09017 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.55□□□□□ -1.68
HOXC4P09017 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.55□□□□□ -1.68
HOXC4P09017 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.55□□□□□ -1.68
HOXC4P09017 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.55□□□□□ -1.68
HOXC4P09017 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
HOXC4P09017 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HOXC4P09017 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
HOXC4P09017 AC123912.3-201ENST00000600907 1367 ntBASIC4.54□□□□□ -1.68
HOXC4P09017 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.54□□□□□ -1.68
HOXC4P09017 AC022893.2-201ENST00000564832 3296 ntBASIC4.54□□□□□ -1.68
HOXC4P09017 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
HOXC4P09017 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.54□□□□□ -1.68
HOXC4P09017 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.54□□□□□ -1.68
HOXC4P09017 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
HOXC4P09017 AC233289.1-201ENST00000403700 508 ntBASIC4.54□□□□□ -1.68
HOXC4P09017 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
HOXC4P09017 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.54□□□□□ -1.68
HOXC4P09017 RPL18P10-201ENST00000425606 538 ntBASIC4.54□□□□□ -1.68
HOXC4P09017 AL121578.1-201ENST00000428051 892 ntBASIC4.54□□□□□ -1.68
HOXC4P09017 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.54□□□□□ -1.68
HOXC4P09017 Z95152.1-201ENST00000453556 656 ntBASIC4.54□□□□□ -1.68
HOXC4P09017 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.54□□□□□ -1.68
HOXC4P09017 AC098583.1-201ENST00000480875 255 ntBASIC4.54□□□□□ -1.68
HOXC4P09017 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC4.54□□□□□ -1.68
HOXC4P09017 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC4.54□□□□□ -1.68
HOXC4P09017 AC025423.2-201ENST00000537570 439 ntBASIC4.54□□□□□ -1.68
HOXC4P09017 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
HOXC4P09017 AC233280.2-201ENST00000603917 1070 ntBASIC4.54□□□□□ -1.68
HOXC4P09017 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HOXC4P09017 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
HOXC4P09017 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HOXC4P09017 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
HOXC4P09017 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HOXC4P09017 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HOXC4P09017 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HOXC4P09017 AL022393.1-201ENST00000625142 1677 ntBASIC4.54□□□□□ -1.68
HOXC4P09017 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.53□□□□□ -1.68
HOXC4P09017 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HOXC4P09017 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.53□□□□□ -1.68
HOXC4P09017 RAD17P1-201ENST00000418130 2042 ntBASIC4.53□□□□□ -1.68
HOXC4P09017 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.53□□□□□ -1.68
HOXC4P09017 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HOXC4P09017 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
HOXC4P09017 Z95331.1-201ENST00000623075 23112 ntBASIC4.53□□□□□ -1.68
HOXC4P09017 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.53□□□□□ -1.68
HOXC4P09017 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
HOXC4P09017 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HOXC4P09017 MIR137-201ENST00000385223 102 ntBASIC4.53□□□□□ -1.68
HOXC4P09017 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.53□□□□□ -1.68
HOXC4P09017 AC023141.6-201ENST00000429418 337 ntBASIC4.53□□□□□ -1.68
HOXC4P09017 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.53□□□□□ -1.68
HOXC4P09017 MTND2P28-201ENST00000457540 1044 ntBASIC4.53□□□□□ -1.68
HOXC4P09017 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC4.53□□□□□ -1.68
HOXC4P09017 RPL7AP10-201ENST00000481016 791 ntBASIC4.53□□□□□ -1.68
HOXC4P09017 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC4.53□□□□□ -1.68
HOXC4P09017 AC015795.1-201ENST00000513669 327 ntBASIC4.53□□□□□ -1.68
HOXC4P09017 AP002981.1-201ENST00000517692 975 ntBASIC4.53□□□□□ -1.68
HOXC4P09017 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC4.53□□□□□ -1.68
HOXC4P09017 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.53□□□□□ -1.68
HOXC4P09017 AC009643.1-201ENST00000532030 391 ntBASIC4.53□□□□□ -1.68
HOXC4P09017 AC022882.1-201ENST00000532142 501 ntBASIC4.53□□□□□ -1.68
HOXC4P09017 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.53□□□□□ -1.68
HOXC4P09017 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
HOXC4P09017 VN1R81P-201ENST00000602085 372 ntBASIC4.53□□□□□ -1.68
HOXC4P09017 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.53□□□□□ -1.68
HOXC4P09017 AC015804.1-201ENST00000622935 435 ntBASIC4.53□□□□□ -1.68
HOXC4P09017 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC4.53□□□□□ -1.68
HOXC4P09017 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HOXC4P09017 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
HOXC4P09017 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HOXC4P09017 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.53□□□□□ -1.68
HOXC4P09017 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HOXC4P09017 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
HOXC4P09017 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HOXC4P09017 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
HOXC4P09017 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.53□□□□□ -1.68
HOXC4P09017 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.53□□□□□ -1.69
HOXC4P09017 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HOXC4P09017 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.52□□□□□ -1.69
HOXC4P09017 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
HOXC4P09017 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
HOXC4P09017 AC107068.1-201ENST00000563286 4218 ntBASIC4.52□□□□□ -1.69
HOXC4P09017 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HOXC4P09017 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.52□□□□□ -1.69
HOXC4P09017 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
HOXC4P09017 OR56B2P-201ENST00000317102 954 ntBASIC4.52□□□□□ -1.69
HOXC4P09017 RNA5SP447-201ENST00000363749 119 ntBASIC4.52□□□□□ -1.69
HOXC4P09017 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HOXC4P09017 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.52□□□□□ -1.69
HOXC4P09017 SNORA79B-201ENST00000410557 148 ntBASIC4.52□□□□□ -1.69
HOXC4P09017 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.52□□□□□ -1.69
HOXC4P09017 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.52□□□□□ -1.69
HOXC4P09017 AL356387.2-201ENST00000422272 243 ntBASIC4.52□□□□□ -1.69
HOXC4P09017 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.52□□□□□ -1.69
HOXC4P09017 AC016712.1-201ENST00000431088 378 ntBASIC4.52□□□□□ -1.69
HOXC4P09017 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC4.52□□□□□ -1.69
HOXC4P09017 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms