Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
HLA-DOAP06340 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.99□□□□□ -1.45
HLA-DOAP06340 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
HLA-DOAP06340 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
HLA-DOAP06340 RNA5SP453-201ENST00000362503 119 ntBASIC5.99□□□□□ -1.45
HLA-DOAP06340 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
HLA-DOAP06340 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC5.99□□□□□ -1.45
HLA-DOAP06340 RNA5SP241-201ENST00000391326 114 ntBASIC5.99□□□□□ -1.45
HLA-DOAP06340 HMGB3P19-201ENST00000403971 560 ntBASIC5.99□□□□□ -1.45
HLA-DOAP06340 AL078595.1-201ENST00000404458 226 ntBASIC5.99□□□□□ -1.45
HLA-DOAP06340 RN7SKP216-201ENST00000411050 312 ntBASIC5.99□□□□□ -1.45
HLA-DOAP06340 AL449283.1-202ENST00000418249 604 ntBASIC5.99□□□□□ -1.45
HLA-DOAP06340 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC5.99□□□□□ -1.45
HLA-DOAP06340 MGAT2P2-201ENST00000427194 797 ntBASIC5.99□□□□□ -1.45
HLA-DOAP06340 USP9YP9-201ENST00000429406 715 ntBASIC5.99□□□□□ -1.45
HLA-DOAP06340 BX276092.6-201ENST00000430476 250 ntBASIC5.99□□□□□ -1.45
HLA-DOAP06340 AC008072.1-201ENST00000434254 824 ntBASIC5.99□□□□□ -1.45
HLA-DOAP06340 AC044797.1-201ENST00000445744 679 ntBASIC5.99□□□□□ -1.45
HLA-DOAP06340 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC5.99□□□□□ -1.45
HLA-DOAP06340 RAB28P3-201ENST00000448325 597 ntBASIC5.99□□□□□ -1.45
HLA-DOAP06340 TCEA1P1-201ENST00000449716 880 ntBASIC5.99□□□□□ -1.45
HLA-DOAP06340 BX276092.8-201ENST00000455722 250 ntBASIC5.99□□□□□ -1.45
HLA-DOAP06340 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
HLA-DOAP06340 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC5.99□□□□□ -1.45
HLA-DOAP06340 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.99□□□□□ -1.45
HLA-DOAP06340 RPS29P22-201ENST00000472363 168 ntBASIC5.99□□□□□ -1.45
HLA-DOAP06340 SETP6-201ENST00000479329 568 ntBASIC5.99□□□□□ -1.45
HLA-DOAP06340 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
HLA-DOAP06340 AC010486.2-201ENST00000505572 483 ntBASIC5.99□□□□□ -1.45
HLA-DOAP06340 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.99□□□□□ -1.45
HLA-DOAP06340 RNA5SP228-201ENST00000516232 133 ntBASIC5.99□□□□□ -1.45
HLA-DOAP06340 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC5.99□□□□□ -1.45
HLA-DOAP06340 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC5.99□□□□□ -1.45
HLA-DOAP06340 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
HLA-DOAP06340 NPM1P5-201ENST00000557228 838 ntBASIC5.99□□□□□ -1.45
HLA-DOAP06340 AC025918.2-201ENST00000558683 763 ntBASIC5.99□□□□□ -1.45
HLA-DOAP06340 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC5.99□□□□□ -1.45
HLA-DOAP06340 BGLT3-201ENST00000564523 994 ntBASIC5.99□□□□□ -1.45
HLA-DOAP06340 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.99□□□□□ -1.45
HLA-DOAP06340 RN7SL290P-201ENST00000578661 300 ntBASIC5.99□□□□□ -1.45
HLA-DOAP06340 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.99□□□□□ -1.45
HLA-DOAP06340 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC5.99□□□□□ -1.45
HLA-DOAP06340 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.99□□□□□ -1.45
HLA-DOAP06340 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.99□□□□□ -1.45
HLA-DOAP06340 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC5.99□□□□□ -1.45
HLA-DOAP06340 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC5.99□□□□□ -1.45
HLA-DOAP06340 AC010620.1-201ENST00000601088 1102 ntBASIC5.99□□□□□ -1.45
HLA-DOAP06340 AC008121.2-201ENST00000614647 523 ntBASIC5.99□□□□□ -1.45
HLA-DOAP06340 AL162574.1-201ENST00000615702 950 ntBASIC5.99□□□□□ -1.45
HLA-DOAP06340 AC006927.2-201ENST00000639256 389 ntBASIC5.99□□□□□ -1.45
HLA-DOAP06340 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
HLA-DOAP06340 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
HLA-DOAP06340 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
HLA-DOAP06340 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.99□□□□□ -1.45
HLA-DOAP06340 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC5.99□□□□□ -1.45
HLA-DOAP06340 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.99□□□□□ -1.45
HLA-DOAP06340 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
HLA-DOAP06340 AC139426.3-201ENST00000605648 2059 ntBASIC5.98□□□□□ -1.45
HLA-DOAP06340 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HLA-DOAP06340 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.98□□□□□ -1.45
HLA-DOAP06340 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HLA-DOAP06340 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.98□□□□□ -1.45
HLA-DOAP06340 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.98□□□□□ -1.45
HLA-DOAP06340 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HLA-DOAP06340 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.98□□□□□ -1.45
HLA-DOAP06340 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.98□□□□□ -1.45
HLA-DOAP06340 AL022311.1-201ENST00000623726 19416 ntBASIC5.98□□□□□ -1.45
HLA-DOAP06340 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HLA-DOAP06340 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
HLA-DOAP06340 RNU6-468P-201ENST00000384003 109 ntBASIC5.98□□□□□ -1.45
HLA-DOAP06340 SNORD116-8-201ENST00000384365 95 ntBASIC5.98□□□□□ -1.45
HLA-DOAP06340 AL049545.1-201ENST00000401856 572 ntBASIC5.98□□□□□ -1.45
HLA-DOAP06340 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.98□□□□□ -1.45
HLA-DOAP06340 LSM5-206ENST00000409987 504 ntTSL 5 BASIC5.98□□□□□ -1.45
HLA-DOAP06340 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC5.98□□□□□ -1.45
HLA-DOAP06340 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC5.98□□□□□ -1.45
HLA-DOAP06340 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HLA-DOAP06340 RPL22P18-201ENST00000417197 377 ntBASIC5.98□□□□□ -1.45
HLA-DOAP06340 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.98□□□□□ -1.45
HLA-DOAP06340 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.98□□□□□ -1.45
HLA-DOAP06340 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.98□□□□□ -1.45
HLA-DOAP06340 OSTCP5-201ENST00000425293 453 ntBASIC5.98□□□□□ -1.45
HLA-DOAP06340 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.98□□□□□ -1.45
HLA-DOAP06340 HSPD1P12-201ENST00000429127 1069 ntBASIC5.98□□□□□ -1.45
HLA-DOAP06340 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.98□□□□□ -1.45
HLA-DOAP06340 RPS7P2-201ENST00000435134 607 ntBASIC5.98□□□□□ -1.45
HLA-DOAP06340 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.98□□□□□ -1.45
HLA-DOAP06340 CR769776.1-201ENST00000441254 787 ntBASIC5.98□□□□□ -1.45
HLA-DOAP06340 AL627224.1-201ENST00000448334 444 ntBASIC5.98□□□□□ -1.45
HLA-DOAP06340 TPT1P1-201ENST00000458495 518 ntBASIC5.98□□□□□ -1.45
HLA-DOAP06340 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5.98□□□□□ -1.45
HLA-DOAP06340 AC104849.1-201ENST00000462623 405 ntBASIC5.98□□□□□ -1.45
HLA-DOAP06340 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.98□□□□□ -1.45
HLA-DOAP06340 AC004263.1-201ENST00000479327 332 ntBASIC5.98□□□□□ -1.45
HLA-DOAP06340 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HLA-DOAP06340 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC5.98□□□□□ -1.45
HLA-DOAP06340 AC091435.1-201ENST00000505442 584 ntBASIC5.98□□□□□ -1.45
HLA-DOAP06340 MTND1P22-201ENST00000510572 951 ntBASIC5.98□□□□□ -1.45
HLA-DOAP06340 AC010486.3-201ENST00000511602 785 ntBASIC5.98□□□□□ -1.45
HLA-DOAP06340 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms