Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CHRNA1P02708 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CHRNA1P02708 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
CHRNA1P02708 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
CHRNA1P02708 AC104623.2-202ENST00000623477 4002 ntBASIC5.13□□□□□ -1.59
CHRNA1P02708 AC021242.1-201ENST00000507315 2035 ntBASIC5.13□□□□□ -1.59
CHRNA1P02708 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CHRNA1P02708 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CHRNA1P02708 AC021146.4-201ENST00000309229 279 ntBASIC5.13□□□□□ -1.59
CHRNA1P02708 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
CHRNA1P02708 SEPT7P8-201ENST00000413308 775 ntBASIC5.13□□□□□ -1.59
CHRNA1P02708 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.13□□□□□ -1.59
CHRNA1P02708 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC5.13□□□□□ -1.59
CHRNA1P02708 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC5.13□□□□□ -1.59
CHRNA1P02708 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC5.13□□□□□ -1.59
CHRNA1P02708 MRPL35P2-201ENST00000448009 511 ntBASIC5.13□□□□□ -1.59
CHRNA1P02708 AC009963.2-201ENST00000453431 138 ntBASIC5.13□□□□□ -1.59
CHRNA1P02708 PPIAP21-201ENST00000464473 501 ntBASIC5.13□□□□□ -1.59
CHRNA1P02708 AC021660.1-201ENST00000465006 554 ntBASIC5.13□□□□□ -1.59
CHRNA1P02708 RN7SL41P-201ENST00000476144 297 ntBASIC5.13□□□□□ -1.59
CHRNA1P02708 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC5.13□□□□□ -1.59
CHRNA1P02708 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.13□□□□□ -1.59
CHRNA1P02708 RNA5SP464-201ENST00000516251 108 ntBASIC5.13□□□□□ -1.59
CHRNA1P02708 AC005868.1-201ENST00000536421 331 ntBASIC5.13□□□□□ -1.59
CHRNA1P02708 FKBP1BP1-201ENST00000553366 325 ntBASIC5.13□□□□□ -1.59
CHRNA1P02708 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC5.13□□□□□ -1.59
CHRNA1P02708 AP001542.1-201ENST00000591314 200 ntBASIC5.13□□□□□ -1.59
CHRNA1P02708 AC011944.2-201ENST00000624440 683 ntBASIC5.13□□□□□ -1.59
CHRNA1P02708 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.13□□□□□ -1.59
CHRNA1P02708 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CHRNA1P02708 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
CHRNA1P02708 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.13□□□□□ -1.59
CHRNA1P02708 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CHRNA1P02708 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC5.13□□□□□ -1.59
CHRNA1P02708 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CHRNA1P02708 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.13□□□□□ -1.59
CHRNA1P02708 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
CHRNA1P02708 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
CHRNA1P02708 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
CHRNA1P02708 MUC2-202ENST00000613187 4845 ntBASIC5.12□□□□□ -1.59
CHRNA1P02708 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
CHRNA1P02708 AL031595.2-201ENST00000624215 19071 ntBASIC5.12□□□□□ -1.59
CHRNA1P02708 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.12□□□□□ -1.59
CHRNA1P02708 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CHRNA1P02708 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.12□□□□□ -1.59
CHRNA1P02708 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
CHRNA1P02708 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CHRNA1P02708 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CHRNA1P02708 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CHRNA1P02708 RNU6-697P-201ENST00000363348 107 ntBASIC5.12□□□□□ -1.59
CHRNA1P02708 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CHRNA1P02708 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
CHRNA1P02708 AL672167.2-201ENST00000377164 879 ntBASIC5.12□□□□□ -1.59
CHRNA1P02708 MIR659-201ENST00000384963 97 ntBASIC5.12□□□□□ -1.59
CHRNA1P02708 SNORA68.2-201ENST00000391263 128 ntBASIC5.12□□□□□ -1.59
CHRNA1P02708 RPL23AP59-201ENST00000399415 461 ntBASIC5.12□□□□□ -1.59
CHRNA1P02708 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.12□□□□□ -1.59
CHRNA1P02708 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.12□□□□□ -1.59
CHRNA1P02708 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.12□□□□□ -1.59
CHRNA1P02708 FCF1P7-201ENST00000451185 558 ntBASIC5.12□□□□□ -1.59
CHRNA1P02708 NUTF2P7-201ENST00000453086 375 ntBASIC5.12□□□□□ -1.59
CHRNA1P02708 AC245028.2-201ENST00000458673 253 ntBASIC5.12□□□□□ -1.59
CHRNA1P02708 AC010618.1-201ENST00000469924 477 ntBASIC5.12□□□□□ -1.59
CHRNA1P02708 MYL12BP2-201ENST00000503948 512 ntBASIC5.12□□□□□ -1.59
CHRNA1P02708 AC093840.1-201ENST00000511599 336 ntBASIC5.12□□□□□ -1.59
CHRNA1P02708 CCNHP1-201ENST00000513311 678 ntBASIC5.12□□□□□ -1.59
CHRNA1P02708 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.12□□□□□ -1.59
CHRNA1P02708 OR8G5-201ENST00000524943 1041 ntBASIC5.12□□□□□ -1.59
CHRNA1P02708 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
CHRNA1P02708 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC5.12□□□□□ -1.59
CHRNA1P02708 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.12□□□□□ -1.59
CHRNA1P02708 AC084033.1-201ENST00000550830 633 ntBASIC5.12□□□□□ -1.59
CHRNA1P02708 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC5.12□□□□□ -1.59
CHRNA1P02708 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.12□□□□□ -1.59
CHRNA1P02708 AC067838.1-201ENST00000606064 577 ntBASIC5.12□□□□□ -1.59
CHRNA1P02708 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.12□□□□□ -1.59
CHRNA1P02708 AL008729.2-201ENST00000606393 473 ntBASIC5.12□□□□□ -1.59
CHRNA1P02708 OR7A19P-201ENST00000608051 733 ntBASIC5.12□□□□□ -1.59
CHRNA1P02708 AL133243.1-201ENST00000614487 366 ntBASIC5.12□□□□□ -1.59
CHRNA1P02708 BNIP3P41-202ENST00000616656 861 ntBASIC5.12□□□□□ -1.59
CHRNA1P02708 AL121890.3-201ENST00000618494 516 ntBASIC5.12□□□□□ -1.59
CHRNA1P02708 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC5.12□□□□□ -1.59
CHRNA1P02708 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC5.12□□□□□ -1.59
CHRNA1P02708 PCAT14-202ENST00000627127 3935 ntBASIC5.12□□□□□ -1.59
CHRNA1P02708 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC5.12□□□□□ -1.59
CHRNA1P02708 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.12□□□□□ -1.59
CHRNA1P02708 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.12□□□□□ -1.59
CHRNA1P02708 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.12□□□□□ -1.59
CHRNA1P02708 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CHRNA1P02708 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.12□□□□□ -1.59
CHRNA1P02708 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.12□□□□□ -1.59
CHRNA1P02708 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CHRNA1P02708 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.12□□□□□ -1.59
CHRNA1P02708 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
CHRNA1P02708 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC5.11□□□□□ -1.59
CHRNA1P02708 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
CHRNA1P02708 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.11□□□□□ -1.59
CHRNA1P02708 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CHRNA1P02708 RN7SKP224-201ENST00000364140 325 ntBASIC5.11□□□□□ -1.59
CHRNA1P02708 RNA5SP509-201ENST00000364577 119 ntBASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms