Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.84□□□□□ -1.63
APOEP02649 AL672167.1-203ENST00000641299 2975 ntBASIC4.84□□□□□ -1.63
APOEP02649 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
APOEP02649 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
APOEP02649 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
APOEP02649 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
APOEP02649 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
APOEP02649 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.83□□□□□ -1.64
APOEP02649 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.83□□□□□ -1.64
APOEP02649 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
APOEP02649 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
APOEP02649 SNORD96B-201ENST00000386148 79 ntBASIC4.83□□□□□ -1.64
APOEP02649 RPS4XP9-201ENST00000405151 780 ntBASIC4.83□□□□□ -1.64
APOEP02649 OR51B3P-201ENST00000412287 913 ntBASIC4.83□□□□□ -1.64
APOEP02649 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.83□□□□□ -1.64
APOEP02649 NAP1L4P3-201ENST00000432820 1147 ntBASIC4.83□□□□□ -1.64
APOEP02649 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.83□□□□□ -1.64
APOEP02649 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC4.83□□□□□ -1.64
APOEP02649 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC4.83□□□□□ -1.64
APOEP02649 RPL23AP37-201ENST00000479658 549 ntBASIC4.83□□□□□ -1.64
APOEP02649 RPL23AP72-201ENST00000492447 435 ntBASIC4.83□□□□□ -1.64
APOEP02649 AC008897.1-201ENST00000494006 347 ntBASIC4.83□□□□□ -1.64
APOEP02649 RPS4XP18-201ENST00000495480 763 ntBASIC4.83□□□□□ -1.64
APOEP02649 AC112184.1-201ENST00000505179 312 ntBASIC4.83□□□□□ -1.64
APOEP02649 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.83□□□□□ -1.64
APOEP02649 HMGB3P13-201ENST00000511263 607 ntBASIC4.83□□□□□ -1.64
APOEP02649 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.83□□□□□ -1.64
APOEP02649 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.83□□□□□ -1.64
APOEP02649 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC4.83□□□□□ -1.64
APOEP02649 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.83□□□□□ -1.64
APOEP02649 CR383656.6-201ENST00000550518 394 ntBASIC4.83□□□□□ -1.64
APOEP02649 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.83□□□□□ -1.64
APOEP02649 AC105129.1-201ENST00000560250 297 ntBASIC4.83□□□□□ -1.64
APOEP02649 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC4.83□□□□□ -1.64
APOEP02649 AC068790.7-201ENST00000602347 528 ntBASIC4.83□□□□□ -1.64
APOEP02649 AL133338.2-201ENST00000604292 736 ntBASIC4.83□□□□□ -1.64
APOEP02649 COX6CP4-201ENST00000605798 228 ntBASIC4.83□□□□□ -1.64
APOEP02649 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
APOEP02649 AC244517.3-201ENST00000616254 1235 ntBASIC4.83□□□□□ -1.64
APOEP02649 AC004232.3-201ENST00000622977 525 ntBASIC4.83□□□□□ -1.64
APOEP02649 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
APOEP02649 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.83□□□□□ -1.64
APOEP02649 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
APOEP02649 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
APOEP02649 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.83□□□□□ -1.64
APOEP02649 AC092435.4-201ENST00000623012 4159 ntBASIC4.83□□□□□ -1.64
APOEP02649 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
APOEP02649 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.82□□□□□ -1.64
APOEP02649 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
APOEP02649 ALB-214ENST00000509063 1911 ntTSL 5 BASIC4.82□□□□□ -1.64
APOEP02649 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.82□□□□□ -1.64
APOEP02649 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
APOEP02649 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
APOEP02649 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
APOEP02649 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
APOEP02649 RNA5SP397-201ENST00000391323 118 ntBASIC4.82□□□□□ -1.64
APOEP02649 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.82□□□□□ -1.64
APOEP02649 AL162591.2-201ENST00000449634 317 ntBASIC4.82□□□□□ -1.64
APOEP02649 AC108463.1-201ENST00000450258 347 ntBASIC4.82□□□□□ -1.64
APOEP02649 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.82□□□□□ -1.64
APOEP02649 AK5-208ENST00000478255 556 ntTSL 2 BASIC4.82□□□□□ -1.64
APOEP02649 RN7SL205P-201ENST00000490174 284 ntBASIC4.82□□□□□ -1.64
APOEP02649 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
APOEP02649 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC4.82□□□□□ -1.64
APOEP02649 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC4.82□□□□□ -1.64
APOEP02649 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.82□□□□□ -1.64
APOEP02649 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.82□□□□□ -1.64
APOEP02649 AC107918.3-201ENST00000533272 382 ntBASIC4.82□□□□□ -1.64
APOEP02649 AC018552.1-201ENST00000562099 811 ntBASIC4.82□□□□□ -1.64
APOEP02649 AC130352.1-201ENST00000602979 661 ntBASIC4.82□□□□□ -1.64
APOEP02649 RN7SL722P-201ENST00000617780 284 ntBASIC4.82□□□□□ -1.64
APOEP02649 RN7SL565P-201ENST00000618246 284 ntBASIC4.82□□□□□ -1.64
APOEP02649 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.82□□□□□ -1.64
APOEP02649 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
APOEP02649 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
APOEP02649 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.82□□□□□ -1.64
APOEP02649 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
APOEP02649 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
APOEP02649 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.81□□□□□ -1.64
APOEP02649 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
APOEP02649 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
APOEP02649 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
APOEP02649 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.81□□□□□ -1.64
APOEP02649 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
APOEP02649 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
APOEP02649 MGP-201ENST00000228938 694 ntTSL 3 BASIC4.81□□□□□ -1.64
APOEP02649 RNU6-398P-201ENST00000384143 109 ntBASIC4.81□□□□□ -1.64
APOEP02649 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
APOEP02649 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
APOEP02649 AL049697.2-201ENST00000403708 294 ntBASIC4.81□□□□□ -1.64
APOEP02649 AL121834.1-202ENST00000404494 277 ntBASIC4.81□□□□□ -1.64
APOEP02649 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.81□□□□□ -1.64
APOEP02649 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.81□□□□□ -1.64
APOEP02649 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.81□□□□□ -1.64
APOEP02649 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
APOEP02649 CEACAMP6-201ENST00000452007 574 ntBASIC4.81□□□□□ -1.64
APOEP02649 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.81□□□□□ -1.64
APOEP02649 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
APOEP02649 MTND4LP2-201ENST00000502312 285 ntBASIC4.81□□□□□ -1.64
APOEP02649 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms