Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HLA-DQA1P01909 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC3.54□□□□□ -1.84
HLA-DQA1P01909 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HLA-DQA1P01909 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC3.54□□□□□ -1.84
HLA-DQA1P01909 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
HLA-DQA1P01909 AC008758.3-201ENST00000507003 1829 ntBASIC3.54□□□□□ -1.84
HLA-DQA1P01909 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.54□□□□□ -1.84
HLA-DQA1P01909 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC3.54□□□□□ -1.84
HLA-DQA1P01909 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
HLA-DQA1P01909 SNORA67-201ENST00000384423 137 ntBASIC3.54□□□□□ -1.84
HLA-DQA1P01909 MIR513A2-201ENST00000385249 127 ntBASIC3.54□□□□□ -1.84
HLA-DQA1P01909 MIR143-201ENST00000385300 106 ntBASIC3.54□□□□□ -1.84
HLA-DQA1P01909 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
HLA-DQA1P01909 AL034403.1-201ENST00000399414 885 ntBASIC3.54□□□□□ -1.84
HLA-DQA1P01909 GABARAPL3-201ENST00000412799 354 ntBASIC3.54□□□□□ -1.84
HLA-DQA1P01909 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC3.54□□□□□ -1.84
HLA-DQA1P01909 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC3.54□□□□□ -1.84
HLA-DQA1P01909 AC073136.2-201ENST00000417282 849 ntBASIC3.54□□□□□ -1.84
HLA-DQA1P01909 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
HLA-DQA1P01909 AL356806.1-201ENST00000422524 916 ntBASIC3.54□□□□□ -1.84
HLA-DQA1P01909 MTND4LP13-201ENST00000425022 298 ntBASIC3.54□□□□□ -1.84
HLA-DQA1P01909 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC3.54□□□□□ -1.84
HLA-DQA1P01909 RPL21P91-201ENST00000429231 479 ntBASIC3.54□□□□□ -1.84
HLA-DQA1P01909 AL121776.1-201ENST00000429337 372 ntBASIC3.54□□□□□ -1.84
HLA-DQA1P01909 HLA-N-201ENST00000437516 135 ntBASIC3.54□□□□□ -1.84
HLA-DQA1P01909 AP000936.3-201ENST00000438127 255 ntBASIC3.54□□□□□ -1.84
HLA-DQA1P01909 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC3.54□□□□□ -1.84
HLA-DQA1P01909 PPIAP20-201ENST00000449839 135 ntBASIC3.54□□□□□ -1.84
HLA-DQA1P01909 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC3.54□□□□□ -1.84
HLA-DQA1P01909 EIF2S2P4-201ENST00000461070 984 ntBASIC3.54□□□□□ -1.84
HLA-DQA1P01909 SYT14P1-201ENST00000481459 721 ntBASIC3.54□□□□□ -1.84
HLA-DQA1P01909 RPS21P4-201ENST00000487122 248 ntBASIC3.54□□□□□ -1.84
HLA-DQA1P01909 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
HLA-DQA1P01909 AC108693.1-201ENST00000496068 432 ntBASIC3.54□□□□□ -1.84
HLA-DQA1P01909 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC3.54□□□□□ -1.84
HLA-DQA1P01909 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
HLA-DQA1P01909 SNORA70.17-201ENST00000516449 133 ntBASIC3.54□□□□□ -1.84
HLA-DQA1P01909 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC3.54□□□□□ -1.84
HLA-DQA1P01909 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
HLA-DQA1P01909 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC3.54□□□□□ -1.84
HLA-DQA1P01909 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC3.54□□□□□ -1.84
HLA-DQA1P01909 AC091178.1-203ENST00000584586 279 ntBASIC3.54□□□□□ -1.84
HLA-DQA1P01909 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC3.54□□□□□ -1.84
HLA-DQA1P01909 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
HLA-DQA1P01909 BMS1P7-201ENST00000602440 1052 ntBASIC3.54□□□□□ -1.84
HLA-DQA1P01909 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC3.54□□□□□ -1.84
HLA-DQA1P01909 AC109309.2-201ENST00000612597 332 ntBASIC3.54□□□□□ -1.84
HLA-DQA1P01909 AL121873.1-201ENST00000616013 524 ntBASIC3.54□□□□□ -1.84
HLA-DQA1P01909 AL591926.8-201ENST00000616876 211 ntBASIC3.54□□□□□ -1.84
HLA-DQA1P01909 AC009704.2-201ENST00000618739 483 ntBASIC3.54□□□□□ -1.84
HLA-DQA1P01909 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC3.54□□□□□ -1.84
HLA-DQA1P01909 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
HLA-DQA1P01909 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC3.54□□□□□ -1.84
HLA-DQA1P01909 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
HLA-DQA1P01909 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
HLA-DQA1P01909 CASC19-281ENST00000642118 1554 ntBASIC3.54□□□□□ -1.84
HLA-DQA1P01909 AC105074.1-201ENST00000623380 3095 ntBASIC3.54□□□□□ -1.84
HLA-DQA1P01909 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC3.53□□□□□ -1.84
HLA-DQA1P01909 AL355852.1-201ENST00000454081 1771 ntBASIC3.53□□□□□ -1.84
HLA-DQA1P01909 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC3.53□□□□□ -1.84
HLA-DQA1P01909 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.53□□□□□ -1.84
HLA-DQA1P01909 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
HLA-DQA1P01909 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
HLA-DQA1P01909 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HLA-DQA1P01909 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HLA-DQA1P01909 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HLA-DQA1P01909 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
HLA-DQA1P01909 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
HLA-DQA1P01909 RNA5SP513-201ENST00000364648 118 ntBASIC3.53□□□□□ -1.84
HLA-DQA1P01909 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC3.53□□□□□ -1.84
HLA-DQA1P01909 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
HLA-DQA1P01909 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC3.53□□□□□ -1.84
HLA-DQA1P01909 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
HLA-DQA1P01909 RNA5SP339-201ENST00000390987 122 ntBASIC3.53□□□□□ -1.84
HLA-DQA1P01909 U3.25-201ENST00000391209 220 ntBASIC3.53□□□□□ -1.84
HLA-DQA1P01909 AL391422.1-201ENST00000402155 436 ntBASIC3.53□□□□□ -1.84
HLA-DQA1P01909 ARL4AP5-201ENST00000404372 599 ntBASIC3.53□□□□□ -1.84
HLA-DQA1P01909 AL136131.1-201ENST00000406079 803 ntBASIC3.53□□□□□ -1.84
HLA-DQA1P01909 RNA5SP39-201ENST00000411245 120 ntBASIC3.53□□□□□ -1.84
HLA-DQA1P01909 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC3.53□□□□□ -1.84
HLA-DQA1P01909 NPM1P4-201ENST00000414095 812 ntBASIC3.53□□□□□ -1.84
HLA-DQA1P01909 ZNF92P1Y-201ENST00000415010 1191 ntBASIC3.53□□□□□ -1.84
HLA-DQA1P01909 RAC1P3-201ENST00000416129 580 ntBASIC3.53□□□□□ -1.84
HLA-DQA1P01909 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC3.53□□□□□ -1.84
HLA-DQA1P01909 AC006065.1-201ENST00000422539 802 ntBASIC3.53□□□□□ -1.84
HLA-DQA1P01909 EI24P4-201ENST00000423683 1078 ntBASIC3.53□□□□□ -1.84
HLA-DQA1P01909 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC3.53□□□□□ -1.84
HLA-DQA1P01909 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC3.53□□□□□ -1.84
HLA-DQA1P01909 RPL7L1P9-201ENST00000431298 745 ntBASIC3.53□□□□□ -1.84
HLA-DQA1P01909 YWHAEP5-201ENST00000431545 765 ntBASIC3.53□□□□□ -1.84
HLA-DQA1P01909 ELOCP18-201ENST00000434209 337 ntBASIC3.53□□□□□ -1.84
HLA-DQA1P01909 AC093716.1-201ENST00000435923 377 ntBASIC3.53□□□□□ -1.84
HLA-DQA1P01909 AL606490.8-201ENST00000441624 319 ntBASIC3.53□□□□□ -1.84
HLA-DQA1P01909 SPRYD7P1-201ENST00000443861 570 ntBASIC3.53□□□□□ -1.84
HLA-DQA1P01909 RSL24D1P2-201ENST00000445584 366 ntBASIC3.53□□□□□ -1.84
HLA-DQA1P01909 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC3.53□□□□□ -1.84
HLA-DQA1P01909 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC3.53□□□□□ -1.84
HLA-DQA1P01909 AC016724.1-201ENST00000453215 421 ntBASIC3.53□□□□□ -1.84
HLA-DQA1P01909 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC3.53□□□□□ -1.84
HLA-DQA1P01909 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms