Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 SNORA31.9-201ENST00000516429 84 ntBASIC4.96□□□□□ -1.62
PDGFBP01127 AC104997.1-201ENST00000519761 717 ntBASIC4.96□□□□□ -1.62
PDGFBP01127 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.96□□□□□ -1.62
PDGFBP01127 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.96□□□□□ -1.62
PDGFBP01127 AC084783.1-201ENST00000565846 910 ntBASIC4.96□□□□□ -1.62
PDGFBP01127 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.96□□□□□ -1.62
PDGFBP01127 AC006130.2-201ENST00000586202 326 ntBASIC4.96□□□□□ -1.62
PDGFBP01127 AC006272.2-201ENST00000594725 163 ntBASIC4.96□□□□□ -1.62
PDGFBP01127 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.96□□□□□ -1.62
PDGFBP01127 AC100847.1-201ENST00000611316 481 ntBASIC4.96□□□□□ -1.62
PDGFBP01127 AC023043.4-201ENST00000612081 449 ntBASIC4.96□□□□□ -1.62
PDGFBP01127 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.96□□□□□ -1.62
PDGFBP01127 RPL23AP61-201ENST00000623642 466 ntBASIC4.96□□□□□ -1.62
PDGFBP01127 AC067931.1-201ENST00000624190 671 ntBASIC4.96□□□□□ -1.62
PDGFBP01127 AC034229.5-201ENST00000624258 185 ntBASIC4.96□□□□□ -1.62
PDGFBP01127 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC4.96□□□□□ -1.62
PDGFBP01127 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
PDGFBP01127 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.62
PDGFBP01127 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
PDGFBP01127 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
PDGFBP01127 AL158152.1-201ENST00000602652 1435 ntBASIC4.96□□□□□ -1.62
PDGFBP01127 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
PDGFBP01127 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC4.96□□□□□ -1.62
PDGFBP01127 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC4.96□□□□□ -1.62
PDGFBP01127 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC4.95□□□□□ -1.62
PDGFBP01127 AL355488.2-201ENST00000609909 2850 ntBASIC4.95□□□□□ -1.62
PDGFBP01127 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
PDGFBP01127 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.95□□□□□ -1.62
PDGFBP01127 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
PDGFBP01127 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
PDGFBP01127 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
PDGFBP01127 OR56B2P-202ENST00000641377 2453 ntBASIC4.95□□□□□ -1.62
PDGFBP01127 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
PDGFBP01127 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
PDGFBP01127 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC4.95□□□□□ -1.62
PDGFBP01127 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.95□□□□□ -1.62
PDGFBP01127 RN7SKP145-201ENST00000363291 303 ntBASIC4.95□□□□□ -1.62
PDGFBP01127 RN7SKP153-201ENST00000365026 316 ntBASIC4.95□□□□□ -1.62
PDGFBP01127 AL445189.1-201ENST00000405722 338 ntBASIC4.95□□□□□ -1.62
PDGFBP01127 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
PDGFBP01127 DHFRP5-201ENST00000406944 564 ntBASIC4.95□□□□□ -1.62
PDGFBP01127 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.95□□□□□ -1.62
PDGFBP01127 TBCAP2-201ENST00000416175 326 ntBASIC4.95□□□□□ -1.62
PDGFBP01127 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
PDGFBP01127 RNF19BPX-201ENST00000426224 625 ntBASIC4.95□□□□□ -1.62
PDGFBP01127 VTI1BP4-201ENST00000427516 527 ntBASIC4.95□□□□□ -1.62
PDGFBP01127 RPL34P6-201ENST00000432390 345 ntBASIC4.95□□□□□ -1.62
PDGFBP01127 AL606490.7-201ENST00000433136 191 ntBASIC4.95□□□□□ -1.62
PDGFBP01127 AC007563.3-201ENST00000433233 371 ntBASIC4.95□□□□□ -1.62
PDGFBP01127 OR4C10P-201ENST00000434991 931 ntBASIC4.95□□□□□ -1.62
PDGFBP01127 RPS5P7-201ENST00000456664 608 ntBASIC4.95□□□□□ -1.62
PDGFBP01127 RPL7AP52-201ENST00000458096 790 ntBASIC4.95□□□□□ -1.62
PDGFBP01127 RPL5P13-201ENST00000462840 709 ntBASIC4.95□□□□□ -1.62
PDGFBP01127 AK5-208ENST00000478255 556 ntTSL 2 BASIC4.95□□□□□ -1.62
PDGFBP01127 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.95□□□□□ -1.62
PDGFBP01127 AC022133.1-201ENST00000490961 571 ntBASIC4.95□□□□□ -1.62
PDGFBP01127 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC4.95□□□□□ -1.62
PDGFBP01127 AC073358.1-201ENST00000505671 684 ntBASIC4.95□□□□□ -1.62
PDGFBP01127 NDUFB4P12-201ENST00000513465 390 ntBASIC4.95□□□□□ -1.62
PDGFBP01127 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
PDGFBP01127 ACTR6P1-201ENST00000514311 1104 ntBASIC4.95□□□□□ -1.62
PDGFBP01127 AC034244.2-201ENST00000514668 858 ntBASIC4.95□□□□□ -1.62
PDGFBP01127 SNORA67.7-201ENST00000516664 135 ntBASIC4.95□□□□□ -1.62
PDGFBP01127 AC067904.2-201ENST00000517322 1283 ntBASIC4.95□□□□□ -1.62
PDGFBP01127 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.95□□□□□ -1.62
PDGFBP01127 AC079064.1-201ENST00000528365 362 ntBASIC4.95□□□□□ -1.62
PDGFBP01127 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.95□□□□□ -1.62
PDGFBP01127 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
PDGFBP01127 AL390334.1-201ENST00000556395 450 ntBASIC4.95□□□□□ -1.62
PDGFBP01127 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.95□□□□□ -1.62
PDGFBP01127 AC092868.3-201ENST00000560515 784 ntBASIC4.95□□□□□ -1.62
PDGFBP01127 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.95□□□□□ -1.62
PDGFBP01127 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
PDGFBP01127 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.95□□□□□ -1.62
PDGFBP01127 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
PDGFBP01127 AC069061.3-201ENST00000582254 823 ntBASIC4.95□□□□□ -1.62
PDGFBP01127 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC4.95□□□□□ -1.62
PDGFBP01127 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC4.95□□□□□ -1.62
PDGFBP01127 AC025857.2-201ENST00000602711 238 ntBASIC4.95□□□□□ -1.62
PDGFBP01127 AC006363.1-201ENST00000603806 463 ntBASIC4.95□□□□□ -1.62
PDGFBP01127 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.95□□□□□ -1.62
PDGFBP01127 AC114781.5-201ENST00000615297 108 ntBASIC4.95□□□□□ -1.62
PDGFBP01127 AC006133.1-201ENST00000617106 264 ntBASIC4.95□□□□□ -1.62
PDGFBP01127 AL049536.1-201ENST00000625043 744 ntBASIC4.95□□□□□ -1.62
PDGFBP01127 AC119674.1-220ENST00000641502 1048 ntBASIC4.95□□□□□ -1.62
PDGFBP01127 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC4.95□□□□□ -1.62
PDGFBP01127 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC4.95□□□□□ -1.62
PDGFBP01127 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.95□□□□□ -1.62
PDGFBP01127 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
PDGFBP01127 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
PDGFBP01127 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
PDGFBP01127 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.95□□□□□ -1.62
PDGFBP01127 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.95□□□□□ -1.62
PDGFBP01127 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
PDGFBP01127 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC4.95□□□□□ -1.62
PDGFBP01127 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
PDGFBP01127 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
PDGFBP01127 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
PDGFBP01127 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
PDGFBP01127 AC109446.4-201ENST00000623235 2755 ntBASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms