Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC5.62□□□□□ -1.51
CNOT4O95628 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC5.62□□□□□ -1.51
CNOT4O95628 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC5.62□□□□□ -1.51
CNOT4O95628 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC5.62□□□□□ -1.51
CNOT4O95628 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.62□□□□□ -1.51
CNOT4O95628 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC5.62□□□□□ -1.51
CNOT4O95628 AC123786.2-201ENST00000603459 275 ntBASIC5.62□□□□□ -1.51
CNOT4O95628 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.62□□□□□ -1.51
CNOT4O95628 AC092354.1-201ENST00000606057 376 ntBASIC5.62□□□□□ -1.51
CNOT4O95628 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CNOT4O95628 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
CNOT4O95628 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC5.62□□□□□ -1.51
CNOT4O95628 AC135068.5-201ENST00000624197 983 ntBASIC5.62□□□□□ -1.51
CNOT4O95628 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC5.62□□□□□ -1.51
CNOT4O95628 CASC19-264ENST00000641912 1184 ntBASIC5.62□□□□□ -1.51
CNOT4O95628 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC5.62□□□□□ -1.51
CNOT4O95628 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CNOT4O95628 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.62□□□□□ -1.51
CNOT4O95628 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC5.62□□□□□ -1.51
CNOT4O95628 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CNOT4O95628 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CNOT4O95628 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CNOT4O95628 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.62□□□□□ -1.51
CNOT4O95628 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC5.62□□□□□ -1.51
CNOT4O95628 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CNOT4O95628 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.62□□□□□ -1.51
CNOT4O95628 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.62□□□□□ -1.51
CNOT4O95628 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CNOT4O95628 AL731556.1-201ENST00000394628 3711 ntBASIC5.62□□□□□ -1.51
CNOT4O95628 AC138393.1-206ENST00000540997 1886 ntBASIC5.62□□□□□ -1.51
CNOT4O95628 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CNOT4O95628 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CNOT4O95628 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CNOT4O95628 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CNOT4O95628 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC5.61□□□□□ -1.51
CNOT4O95628 AC010266.2-201ENST00000564741 3255 ntBASIC5.61□□□□□ -1.51
CNOT4O95628 AC062029.1-202ENST00000606164 3651 ntBASIC5.61□□□□□ -1.51
CNOT4O95628 USP46-202ENST00000451218 4622 ntTSL 5 BASIC5.61□□□□□ -1.51
CNOT4O95628 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CNOT4O95628 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
CNOT4O95628 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CNOT4O95628 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CNOT4O95628 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CNOT4O95628 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CNOT4O95628 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CNOT4O95628 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CNOT4O95628 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
CNOT4O95628 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CNOT4O95628 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CNOT4O95628 SNORA75-201ENST00000384158 137 ntBASIC5.61□□□□□ -1.51
CNOT4O95628 AC003045.1-201ENST00000398779 713 ntBASIC5.61□□□□□ -1.51
CNOT4O95628 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.61□□□□□ -1.51
CNOT4O95628 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.61□□□□□ -1.51
CNOT4O95628 AL512430.2-201ENST00000406786 339 ntBASIC5.61□□□□□ -1.51
CNOT4O95628 SNORA77.2-201ENST00000408571 112 ntBASIC5.61□□□□□ -1.51
CNOT4O95628 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.61□□□□□ -1.51
CNOT4O95628 FNDC3CP-201ENST00000420795 1155 ntBASIC5.61□□□□□ -1.51
CNOT4O95628 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CNOT4O95628 PDZK1P1-202ENST00000425209 1350 ntBASIC5.61□□□□□ -1.51
CNOT4O95628 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
CNOT4O95628 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC5.61□□□□□ -1.51
CNOT4O95628 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.61□□□□□ -1.51
CNOT4O95628 MTND1P2-201ENST00000430604 821 ntBASIC5.61□□□□□ -1.51
CNOT4O95628 USP9YP31-201ENST00000431405 881 ntBASIC5.61□□□□□ -1.51
CNOT4O95628 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CNOT4O95628 AC092013.1-201ENST00000438795 332 ntBASIC5.61□□□□□ -1.51
CNOT4O95628 AC122718.1-201ENST00000439448 744 ntBASIC5.61□□□□□ -1.51
CNOT4O95628 AMYP1-201ENST00000440059 1023 ntBASIC5.61□□□□□ -1.51
CNOT4O95628 AC002542.1-201ENST00000440683 193 ntBASIC5.61□□□□□ -1.51
CNOT4O95628 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC5.61□□□□□ -1.51
CNOT4O95628 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.61□□□□□ -1.51
CNOT4O95628 ST13P20-201ENST00000447996 1065 ntBASIC5.61□□□□□ -1.51
CNOT4O95628 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC5.61□□□□□ -1.51
CNOT4O95628 HMGB1P7-201ENST00000450921 612 ntBASIC5.61□□□□□ -1.51
CNOT4O95628 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CNOT4O95628 EEF1A1P24-201ENST00000451469 1378 ntBASIC5.61□□□□□ -1.51
CNOT4O95628 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC5.61□□□□□ -1.51
CNOT4O95628 SNRPGP9-201ENST00000456025 225 ntBASIC5.61□□□□□ -1.51
CNOT4O95628 RPS27AP2-201ENST00000457576 465 ntBASIC5.61□□□□□ -1.51
CNOT4O95628 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC5.61□□□□□ -1.51
CNOT4O95628 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.61□□□□□ -1.51
CNOT4O95628 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CNOT4O95628 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.61□□□□□ -1.51
CNOT4O95628 FAM133DP-201ENST00000464802 691 ntBASIC5.61□□□□□ -1.51
CNOT4O95628 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.61□□□□□ -1.51
CNOT4O95628 PDCL3P4-201ENST00000489621 720 ntBASIC5.61□□□□□ -1.51
CNOT4O95628 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC5.61□□□□□ -1.51
CNOT4O95628 MTND4P29-201ENST00000503122 1372 ntBASIC5.61□□□□□ -1.51
CNOT4O95628 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC5.61□□□□□ -1.51
CNOT4O95628 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.61□□□□□ -1.51
CNOT4O95628 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.61□□□□□ -1.51
CNOT4O95628 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.61□□□□□ -1.51
CNOT4O95628 SMARCE1P4-201ENST00000523647 241 ntBASIC5.61□□□□□ -1.51
CNOT4O95628 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC5.61□□□□□ -1.51
CNOT4O95628 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CNOT4O95628 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC5.61□□□□□ -1.51
CNOT4O95628 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC5.61□□□□□ -1.51
CNOT4O95628 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.61□□□□□ -1.51
CNOT4O95628 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
CNOT4O95628 ATP5F1P7-201ENST00000567330 760 ntBASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms