Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 ZNF736P5Y-201ENST00000451173 805 ntBASIC5.39□□□□□ -1.55
PROM1O43490 AURKAPS1-201ENST00000451805 1212 ntBASIC5.39□□□□□ -1.55
PROM1O43490 RNU7-125P-201ENST00000458760 62 ntBASIC5.39□□□□□ -1.55
PROM1O43490 TSACC-207ENST00000470342 601 ntTSL 2 BASIC5.39□□□□□ -1.55
PROM1O43490 AC037198.2-201ENST00000478845 733 ntBASIC5.39□□□□□ -1.55
PROM1O43490 AC022215.1-201ENST00000481770 362 ntBASIC5.39□□□□□ -1.55
PROM1O43490 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.39□□□□□ -1.55
PROM1O43490 AL136038.1-201ENST00000497246 351 ntBASIC5.39□□□□□ -1.55
PROM1O43490 MTCYBP16-201ENST00000509187 1129 ntBASIC5.39□□□□□ -1.55
PROM1O43490 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC5.39□□□□□ -1.55
PROM1O43490 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PROM1O43490 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC5.39□□□□□ -1.55
PROM1O43490 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
PROM1O43490 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC5.39□□□□□ -1.55
PROM1O43490 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.39□□□□□ -1.55
PROM1O43490 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.39□□□□□ -1.55
PROM1O43490 DEFB130C-202ENST00000530001 230 ntBASIC5.39□□□□□ -1.55
PROM1O43490 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC5.39□□□□□ -1.55
PROM1O43490 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.39□□□□□ -1.55
PROM1O43490 AC023161.2-201ENST00000551218 780 ntBASIC5.39□□□□□ -1.55
PROM1O43490 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.39□□□□□ -1.55
PROM1O43490 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.39□□□□□ -1.55
PROM1O43490 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.39□□□□□ -1.55
PROM1O43490 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.39□□□□□ -1.55
PROM1O43490 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.39□□□□□ -1.55
PROM1O43490 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.39□□□□□ -1.55
PROM1O43490 AC018618.2-201ENST00000604770 446 ntBASIC5.39□□□□□ -1.55
PROM1O43490 AC012557.1-201ENST00000607115 611 ntBASIC5.39□□□□□ -1.55
PROM1O43490 AL121890.2-201ENST00000617644 465 ntBASIC5.39□□□□□ -1.55
PROM1O43490 AC073569.3-201ENST00000619055 682 ntBASIC5.39□□□□□ -1.55
PROM1O43490 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
PROM1O43490 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.39□□□□□ -1.55
PROM1O43490 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC5.39□□□□□ -1.55
PROM1O43490 ZNF663P-202ENST00000641770 1131 ntBASIC5.39□□□□□ -1.55
PROM1O43490 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC5.39□□□□□ -1.55
PROM1O43490 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PROM1O43490 SPATA2P1-201ENST00000431223 2055 ntBASIC5.39□□□□□ -1.55
PROM1O43490 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PROM1O43490 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.39□□□□□ -1.55
PROM1O43490 MTND4P4-201ENST00000439033 1366 ntBASIC5.39□□□□□ -1.55
PROM1O43490 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PROM1O43490 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PROM1O43490 AC144833.1-201ENST00000567953 4089 ntBASIC5.38□□□□□ -1.55
PROM1O43490 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PROM1O43490 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
PROM1O43490 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PROM1O43490 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PROM1O43490 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.38□□□□□ -1.55
PROM1O43490 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PROM1O43490 MIR375-201ENST00000362103 64 ntBASIC5.38□□□□□ -1.55
PROM1O43490 RNU6-623P-201ENST00000363143 105 ntBASIC5.38□□□□□ -1.55
PROM1O43490 RNU4-4P-201ENST00000364588 130 ntBASIC5.38□□□□□ -1.55
PROM1O43490 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC5.38□□□□□ -1.55
PROM1O43490 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PROM1O43490 SNORD116-4-201ENST00000384733 96 ntBASIC5.38□□□□□ -1.55
PROM1O43490 MIR1178-201ENST00000408396 91 ntBASIC5.38□□□□□ -1.55
PROM1O43490 RNU6-648P-201ENST00000410190 107 ntBASIC5.38□□□□□ -1.55
PROM1O43490 AC010385.1-201ENST00000412374 256 ntBASIC5.38□□□□□ -1.55
PROM1O43490 TEX41-202ENST00000414256 604 ntTSL 5 BASIC5.38□□□□□ -1.55
PROM1O43490 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC5.38□□□□□ -1.55
PROM1O43490 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.38□□□□□ -1.55
PROM1O43490 AL513325.1-201ENST00000417716 1034 ntBASIC5.38□□□□□ -1.55
PROM1O43490 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.38□□□□□ -1.55
PROM1O43490 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.38□□□□□ -1.55
PROM1O43490 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC5.38□□□□□ -1.55
PROM1O43490 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.38□□□□□ -1.55
PROM1O43490 AL365203.2-201ENST00000423444 196 ntBASIC5.38□□□□□ -1.55
PROM1O43490 MTND4P20-201ENST00000424125 869 ntBASIC5.38□□□□□ -1.55
PROM1O43490 AC127526.2-201ENST00000426436 775 ntBASIC5.38□□□□□ -1.55
PROM1O43490 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.38□□□□□ -1.55
PROM1O43490 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC5.38□□□□□ -1.55
PROM1O43490 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC5.38□□□□□ -1.55
PROM1O43490 MUPP-201ENST00000438111 566 ntBASIC5.38□□□□□ -1.55
PROM1O43490 AL445567.1-201ENST00000439121 144 ntBASIC5.38□□□□□ -1.55
PROM1O43490 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC5.38□□□□□ -1.55
PROM1O43490 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC5.38□□□□□ -1.55
PROM1O43490 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.38□□□□□ -1.55
PROM1O43490 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.38□□□□□ -1.55
PROM1O43490 AL445665.1-202ENST00000452436 324 ntBASIC5.38□□□□□ -1.55
PROM1O43490 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC5.38□□□□□ -1.55
PROM1O43490 AC073387.1-201ENST00000453261 709 ntBASIC5.38□□□□□ -1.55
PROM1O43490 AC092754.2-201ENST00000463506 460 ntBASIC5.38□□□□□ -1.55
PROM1O43490 UBFD1P1-201ENST00000473259 814 ntBASIC5.38□□□□□ -1.55
PROM1O43490 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.38□□□□□ -1.55
PROM1O43490 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC5.38□□□□□ -1.55
PROM1O43490 TMEM97P2-201ENST00000517841 403 ntBASIC5.38□□□□□ -1.55
PROM1O43490 AC112191.2-201ENST00000522428 333 ntBASIC5.38□□□□□ -1.55
PROM1O43490 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC5.38□□□□□ -1.55
PROM1O43490 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PROM1O43490 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PROM1O43490 AC137627.1-201ENST00000545761 289 ntBASIC5.38□□□□□ -1.55
PROM1O43490 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PROM1O43490 AC084824.1-201ENST00000550917 1005 ntBASIC5.38□□□□□ -1.55
PROM1O43490 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.38□□□□□ -1.55
PROM1O43490 DPPA2P4-201ENST00000563717 878 ntBASIC5.38□□□□□ -1.55
PROM1O43490 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC5.38□□□□□ -1.55
PROM1O43490 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.38□□□□□ -1.55
PROM1O43490 MIR4489-201ENST00000578869 62 ntBASIC5.38□□□□□ -1.55
PROM1O43490 AP001094.1-201ENST00000579805 193 ntBASIC5.38□□□□□ -1.55
PROM1O43490 AC022069.1-201ENST00000582910 658 ntBASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms