Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 CPHL1P-201ENST00000461341 3407 ntBASIC4.49□□□□□ -1.69
TRIM49D1C9J1S8 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
TRIM49D1C9J1S8 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC4.48□□□□□ -1.69
TRIM49D1C9J1S8 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
TRIM49D1C9J1S8 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.48□□□□□ -1.69
TRIM49D1C9J1S8 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
TRIM49D1C9J1S8 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.48□□□□□ -1.69
TRIM49D1C9J1S8 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.48□□□□□ -1.69
TRIM49D1C9J1S8 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.48□□□□□ -1.69
TRIM49D1C9J1S8 AC021146.4-201ENST00000309229 279 ntBASIC4.48□□□□□ -1.69
TRIM49D1C9J1S8 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
TRIM49D1C9J1S8 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
TRIM49D1C9J1S8 CCL7-202ENST00000394627 696 ntTSL 3 BASIC4.48□□□□□ -1.69
TRIM49D1C9J1S8 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
TRIM49D1C9J1S8 SNORA11B-201ENST00000408175 129 ntBASIC4.48□□□□□ -1.69
TRIM49D1C9J1S8 RNA5SP113-201ENST00000410486 84 ntBASIC4.48□□□□□ -1.69
TRIM49D1C9J1S8 RN7SKP213-201ENST00000410746 298 ntBASIC4.48□□□□□ -1.69
TRIM49D1C9J1S8 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.48□□□□□ -1.69
TRIM49D1C9J1S8 ATG4AP1-201ENST00000416893 538 ntBASIC4.48□□□□□ -1.69
TRIM49D1C9J1S8 HLA-N-201ENST00000437516 135 ntBASIC4.48□□□□□ -1.69
TRIM49D1C9J1S8 AC005154.2-201ENST00000438110 379 ntBASIC4.48□□□□□ -1.69
TRIM49D1C9J1S8 MTCO3P17-201ENST00000443775 513 ntBASIC4.48□□□□□ -1.69
TRIM49D1C9J1S8 SUMO2P1-206ENST00000445436 284 ntBASIC4.48□□□□□ -1.69
TRIM49D1C9J1S8 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC4.48□□□□□ -1.69
TRIM49D1C9J1S8 AC079804.1-201ENST00000461922 436 ntBASIC4.48□□□□□ -1.69
TRIM49D1C9J1S8 AC093890.1-201ENST00000502554 540 ntBASIC4.48□□□□□ -1.69
TRIM49D1C9J1S8 AC112184.1-201ENST00000505179 312 ntBASIC4.48□□□□□ -1.69
TRIM49D1C9J1S8 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC4.48□□□□□ -1.69
TRIM49D1C9J1S8 RNU6-751P-201ENST00000516382 101 ntBASIC4.48□□□□□ -1.69
TRIM49D1C9J1S8 RNA5SP360-201ENST00000516555 118 ntBASIC4.48□□□□□ -1.69
TRIM49D1C9J1S8 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC4.48□□□□□ -1.69
TRIM49D1C9J1S8 SOX5P1-201ENST00000524155 1127 ntBASIC4.48□□□□□ -1.69
TRIM49D1C9J1S8 OR5AZ1P-201ENST00000527448 943 ntBASIC4.48□□□□□ -1.69
TRIM49D1C9J1S8 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC4.48□□□□□ -1.69
TRIM49D1C9J1S8 AC005000.1-201ENST00000536192 288 ntBASIC4.48□□□□□ -1.69
TRIM49D1C9J1S8 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.48□□□□□ -1.69
TRIM49D1C9J1S8 AC044860.2-201ENST00000561005 179 ntBASIC4.48□□□□□ -1.69
TRIM49D1C9J1S8 AC009117.1-201ENST00000563948 554 ntBASIC4.48□□□□□ -1.69
TRIM49D1C9J1S8 BGLT3-201ENST00000564523 994 ntBASIC4.48□□□□□ -1.69
TRIM49D1C9J1S8 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.48□□□□□ -1.69
TRIM49D1C9J1S8 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.48□□□□□ -1.69
TRIM49D1C9J1S8 AL021707.7-201ENST00000607991 416 ntBASIC4.48□□□□□ -1.69
TRIM49D1C9J1S8 BX323046.1-201ENST00000610145 535 ntBASIC4.48□□□□□ -1.69
TRIM49D1C9J1S8 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.48□□□□□ -1.69
TRIM49D1C9J1S8 AC074140.1-201ENST00000621617 208 ntBASIC4.48□□□□□ -1.69
TRIM49D1C9J1S8 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.48□□□□□ -1.69
TRIM49D1C9J1S8 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.48□□□□□ -1.69
TRIM49D1C9J1S8 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC4.48□□□□□ -1.69
TRIM49D1C9J1S8 ZNF137P-201ENST00000456718 1920 ntBASIC4.48□□□□□ -1.69
TRIM49D1C9J1S8 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
TRIM49D1C9J1S8 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
TRIM49D1C9J1S8 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
TRIM49D1C9J1S8 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
TRIM49D1C9J1S8 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
TRIM49D1C9J1S8 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
TRIM49D1C9J1S8 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
TRIM49D1C9J1S8 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
TRIM49D1C9J1S8 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
TRIM49D1C9J1S8 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
TRIM49D1C9J1S8 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.47□□□□□ -1.69
TRIM49D1C9J1S8 RNU4-44P-201ENST00000363050 141 ntBASIC4.47□□□□□ -1.69
TRIM49D1C9J1S8 RPS24P12-201ENST00000402084 394 ntBASIC4.47□□□□□ -1.69
TRIM49D1C9J1S8 RPS20P25-201ENST00000412447 352 ntBASIC4.47□□□□□ -1.69
TRIM49D1C9J1S8 AL356968.2-201ENST00000412769 1257 ntBASIC4.47□□□□□ -1.69
TRIM49D1C9J1S8 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.47□□□□□ -1.69
TRIM49D1C9J1S8 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.47□□□□□ -1.69
TRIM49D1C9J1S8 SETP10-201ENST00000424368 814 ntBASIC4.47□□□□□ -1.69
TRIM49D1C9J1S8 AC244033.1-201ENST00000426826 870 ntBASIC4.47□□□□□ -1.69
TRIM49D1C9J1S8 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.47□□□□□ -1.69
TRIM49D1C9J1S8 RPEP2-201ENST00000432149 701 ntBASIC4.47□□□□□ -1.69
TRIM49D1C9J1S8 PTMAP6-201ENST00000439110 327 ntBASIC4.47□□□□□ -1.69
TRIM49D1C9J1S8 AC011753.3-201ENST00000443436 406 ntBASIC4.47□□□□□ -1.69
TRIM49D1C9J1S8 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.47□□□□□ -1.69
TRIM49D1C9J1S8 AC012671.1-201ENST00000451912 203 ntBASIC4.47□□□□□ -1.69
TRIM49D1C9J1S8 VN1R32P-201ENST00000452234 905 ntBASIC4.47□□□□□ -1.69
TRIM49D1C9J1S8 AC063943.1-201ENST00000465434 453 ntBASIC4.47□□□□□ -1.69
TRIM49D1C9J1S8 AC006967.1-201ENST00000467608 589 ntBASIC4.47□□□□□ -1.69
TRIM49D1C9J1S8 MTND4LP2-201ENST00000502312 285 ntBASIC4.47□□□□□ -1.69
TRIM49D1C9J1S8 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.47□□□□□ -1.69
TRIM49D1C9J1S8 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.47□□□□□ -1.69
TRIM49D1C9J1S8 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.47□□□□□ -1.69
TRIM49D1C9J1S8 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.47□□□□□ -1.69
TRIM49D1C9J1S8 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.47□□□□□ -1.69
TRIM49D1C9J1S8 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC4.47□□□□□ -1.69
TRIM49D1C9J1S8 AC008126.1-201ENST00000549019 480 ntBASIC4.47□□□□□ -1.69
TRIM49D1C9J1S8 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC4.47□□□□□ -1.69
TRIM49D1C9J1S8 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC4.47□□□□□ -1.69
TRIM49D1C9J1S8 RPL23AP97-201ENST00000568955 471 ntBASIC4.47□□□□□ -1.69
TRIM49D1C9J1S8 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
TRIM49D1C9J1S8 AP005212.4-201ENST00000614206 710 ntBASIC4.47□□□□□ -1.69
TRIM49D1C9J1S8 MIR6853-201ENST00000619642 74 ntBASIC4.47□□□□□ -1.69
TRIM49D1C9J1S8 AC105074.1-201ENST00000623380 3095 ntBASIC4.47□□□□□ -1.69
TRIM49D1C9J1S8 Z98755.1-201ENST00000407015 1384 ntBASIC4.47□□□□□ -1.69
TRIM49D1C9J1S8 MAPK10-263ENST00000641052 4307 ntBASIC4.47□□□□□ -1.69
TRIM49D1C9J1S8 TTC39DP-201ENST00000416781 1688 ntBASIC4.47□□□□□ -1.69
TRIM49D1C9J1S8 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
TRIM49D1C9J1S8 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
TRIM49D1C9J1S8 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
TRIM49D1C9J1S8 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
TRIM49D1C9J1S8 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms