Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 AL359263.1-201ENST00000441188 2796 ntBASIC5.74□□□□□ -1.49
SHISA3A0PJX4 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC5.74□□□□□ -1.49
SHISA3A0PJX4 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC5.74□□□□□ -1.49
SHISA3A0PJX4 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SHISA3A0PJX4 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
SHISA3A0PJX4 CCDC150P1-201ENST00000537123 2215 ntBASIC5.74□□□□□ -1.49
SHISA3A0PJX4 AC007114.2-201ENST00000576014 4281 ntBASIC5.74□□□□□ -1.49
SHISA3A0PJX4 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
SHISA3A0PJX4 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC5.74□□□□□ -1.49
SHISA3A0PJX4 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
SHISA3A0PJX4 AL512646.1-201ENST00000269395 1077 ntBASIC5.74□□□□□ -1.49
SHISA3A0PJX4 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
SHISA3A0PJX4 OR5A1-201ENST00000302030 1051 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
SHISA3A0PJX4 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SHISA3A0PJX4 SNRPEP3-201ENST00000338402 276 ntBASIC5.74□□□□□ -1.49
SHISA3A0PJX4 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
SHISA3A0PJX4 Y_RNA.548-201ENST00000384656 105 ntBASIC5.74□□□□□ -1.49
SHISA3A0PJX4 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
SHISA3A0PJX4 MIR1305-201ENST00000408300 86 ntBASIC5.74□□□□□ -1.49
SHISA3A0PJX4 BX295541.1-201ENST00000417774 250 ntBASIC5.74□□□□□ -1.49
SHISA3A0PJX4 AC118470.1-201ENST00000419891 453 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
SHISA3A0PJX4 PRUNEP1-201ENST00000425846 705 ntBASIC5.74□□□□□ -1.49
SHISA3A0PJX4 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC5.74□□□□□ -1.49
SHISA3A0PJX4 LINC01723-201ENST00000432244 601 ntTSL 2 BASIC5.74□□□□□ -1.49
SHISA3A0PJX4 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SHISA3A0PJX4 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC5.74□□□□□ -1.49
SHISA3A0PJX4 ARPC3P1-201ENST00000437218 533 ntBASIC5.74□□□□□ -1.49
SHISA3A0PJX4 CR391992.1-201ENST00000438601 394 ntBASIC5.74□□□□□ -1.49
SHISA3A0PJX4 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC5.74□□□□□ -1.49
SHISA3A0PJX4 FABP3P2-201ENST00000453169 399 ntBASIC5.74□□□□□ -1.49
SHISA3A0PJX4 AC103563.5-201ENST00000455643 364 ntBASIC5.74□□□□□ -1.49
SHISA3A0PJX4 RN7SL308P-201ENST00000464971 297 ntBASIC5.74□□□□□ -1.49
SHISA3A0PJX4 RN7SL849P-201ENST00000485236 295 ntBASIC5.74□□□□□ -1.49
SHISA3A0PJX4 AC022415.1-202ENST00000486612 523 ntBASIC5.74□□□□□ -1.49
SHISA3A0PJX4 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC5.74□□□□□ -1.49
SHISA3A0PJX4 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.74□□□□□ -1.49
SHISA3A0PJX4 ROPN1B-207ENST00000511082 782 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SHISA3A0PJX4 RN7SKP67-201ENST00000515905 235 ntBASIC5.74□□□□□ -1.49
SHISA3A0PJX4 Y_RNA.704-201ENST00000516851 102 ntBASIC5.74□□□□□ -1.49
SHISA3A0PJX4 RN7SKP283-201ENST00000517197 270 ntBASIC5.74□□□□□ -1.49
SHISA3A0PJX4 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC5.74□□□□□ -1.49
SHISA3A0PJX4 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.74□□□□□ -1.49
SHISA3A0PJX4 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC5.74□□□□□ -1.49
SHISA3A0PJX4 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC5.74□□□□□ -1.49
SHISA3A0PJX4 TMEM132D-AS1-207ENST00000542535 442 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SHISA3A0PJX4 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC5.74□□□□□ -1.49
SHISA3A0PJX4 AC007494.1-201ENST00000562293 760 ntBASIC5.74□□□□□ -1.49
SHISA3A0PJX4 MIR3159-201ENST00000584572 74 ntBASIC5.74□□□□□ -1.49
SHISA3A0PJX4 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC5.74□□□□□ -1.49
SHISA3A0PJX4 AC090236.2-201ENST00000587933 1101 ntBASIC5.74□□□□□ -1.49
SHISA3A0PJX4 AC011447.2-201ENST00000592921 283 ntBASIC5.74□□□□□ -1.49
SHISA3A0PJX4 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.74□□□□□ -1.49
SHISA3A0PJX4 AC245014.2-201ENST00000603689 287 ntBASIC5.74□□□□□ -1.49
SHISA3A0PJX4 AL359999.1-201ENST00000604513 294 ntBASIC5.74□□□□□ -1.49
SHISA3A0PJX4 AC246785.4-201ENST00000605374 287 ntBASIC5.74□□□□□ -1.49
SHISA3A0PJX4 AC018695.5-201ENST00000605872 315 ntBASIC5.74□□□□□ -1.49
SHISA3A0PJX4 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC5.74□□□□□ -1.49
SHISA3A0PJX4 AC243773.3-201ENST00000613270 256 ntBASIC5.74□□□□□ -1.49
SHISA3A0PJX4 AC005753.1-201ENST00000623837 618 ntBASIC5.74□□□□□ -1.49
SHISA3A0PJX4 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC5.74□□□□□ -1.49
SHISA3A0PJX4 HSPA8P17-201ENST00000427029 1382 ntBASIC5.74□□□□□ -1.49
SHISA3A0PJX4 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SHISA3A0PJX4 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.74□□□□□ -1.49
SHISA3A0PJX4 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
SHISA3A0PJX4 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
SHISA3A0PJX4 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SHISA3A0PJX4 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SHISA3A0PJX4 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC5.74□□□□□ -1.49
SHISA3A0PJX4 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SHISA3A0PJX4 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SHISA3A0PJX4 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SHISA3A0PJX4 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SHISA3A0PJX4 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
SHISA3A0PJX4 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SHISA3A0PJX4 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SHISA3A0PJX4 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.73□□□□□ -1.49
SHISA3A0PJX4 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SHISA3A0PJX4 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SHISA3A0PJX4 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SHISA3A0PJX4 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC5.73□□□□□ -1.49
SHISA3A0PJX4 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SHISA3A0PJX4 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SHISA3A0PJX4 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
SHISA3A0PJX4 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SHISA3A0PJX4 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SHISA3A0PJX4 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
SHISA3A0PJX4 OR5M2P-202ENST00000641241 4242 ntBASIC5.73□□□□□ -1.49
SHISA3A0PJX4 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SHISA3A0PJX4 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
SHISA3A0PJX4 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
SHISA3A0PJX4 RNU6-251P-201ENST00000363235 104 ntBASIC5.73□□□□□ -1.49
SHISA3A0PJX4 ALOX5AP-201ENST00000380490 904 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SHISA3A0PJX4 RNU6-483P-201ENST00000384088 108 ntBASIC5.73□□□□□ -1.49
SHISA3A0PJX4 RPS3AP5-201ENST00000389400 821 ntBASIC5.73□□□□□ -1.49
SHISA3A0PJX4 SNORD115.1-201ENST00000391109 76 ntBASIC5.73□□□□□ -1.49
SHISA3A0PJX4 AC104297.1-201ENST00000393779 870 ntBASIC5.73□□□□□ -1.49
SHISA3A0PJX4 AL049693.1-201ENST00000402760 611 ntBASIC5.73□□□□□ -1.49
SHISA3A0PJX4 AL136131.1-201ENST00000406079 803 ntBASIC5.73□□□□□ -1.49
SHISA3A0PJX4 RN7SKP266-201ENST00000410232 287 ntBASIC5.73□□□□□ -1.49
SHISA3A0PJX4 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms