Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
HLA-DRB4X5D2U9 AC093535.2-201ENST00000624769 2326 ntBASIC3.55□□□□□ -1.84
HLA-DRB4X5D2U9 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC3.55□□□□□ -1.84
HLA-DRB4X5D2U9 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HLA-DRB4X5D2U9 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
HLA-DRB4X5D2U9 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
HLA-DRB4X5D2U9 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HLA-DRB4X5D2U9 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.55□□□□□ -1.84
HLA-DRB4X5D2U9 TOPORSLP1-201ENST00000467693 2102 ntBASIC3.55□□□□□ -1.84
HLA-DRB4X5D2U9 HCFC2P1-201ENST00000392864 1592 ntBASIC3.55□□□□□ -1.84
HLA-DRB4X5D2U9 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
HLA-DRB4X5D2U9 AP001002.1-201ENST00000625148 1513 ntBASIC3.54□□□□□ -1.84
HLA-DRB4X5D2U9 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
HLA-DRB4X5D2U9 AL133243.3-201ENST00000617415 3004 ntBASIC3.54□□□□□ -1.84
HLA-DRB4X5D2U9 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC3.54□□□□□ -1.84
HLA-DRB4X5D2U9 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HLA-DRB4X5D2U9 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HLA-DRB4X5D2U9 GNAS-202ENST00000306090 477 ntTSL 5 BASIC3.54□□□□□ -1.84
HLA-DRB4X5D2U9 RN7SKP149-201ENST00000363008 344 ntBASIC3.54□□□□□ -1.84
HLA-DRB4X5D2U9 AC019155.1-201ENST00000382242 574 ntBASIC3.54□□□□□ -1.84
HLA-DRB4X5D2U9 SNORA51.8-201ENST00000384234 132 ntBASIC3.54□□□□□ -1.84
HLA-DRB4X5D2U9 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HLA-DRB4X5D2U9 RN7SKP278-201ENST00000410504 342 ntBASIC3.54□□□□□ -1.84
HLA-DRB4X5D2U9 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC3.54□□□□□ -1.84
HLA-DRB4X5D2U9 RPS12P5-201ENST00000423449 371 ntBASIC3.54□□□□□ -1.84
HLA-DRB4X5D2U9 VN1R54P-201ENST00000435210 1049 ntBASIC3.54□□□□□ -1.84
HLA-DRB4X5D2U9 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC3.54□□□□□ -1.84
HLA-DRB4X5D2U9 AC104651.2-201ENST00000447549 528 ntBASIC3.54□□□□□ -1.84
HLA-DRB4X5D2U9 HIGD1AP8-201ENST00000453927 274 ntBASIC3.54□□□□□ -1.84
HLA-DRB4X5D2U9 RPL7P16-201ENST00000479738 738 ntBASIC3.54□□□□□ -1.84
HLA-DRB4X5D2U9 ALDH7A1P3-201ENST00000492517 345 ntBASIC3.54□□□□□ -1.84
HLA-DRB4X5D2U9 AC025164.1-201ENST00000496249 478 ntBASIC3.54□□□□□ -1.84
HLA-DRB4X5D2U9 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
HLA-DRB4X5D2U9 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC3.54□□□□□ -1.84
HLA-DRB4X5D2U9 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC3.54□□□□□ -1.84
HLA-DRB4X5D2U9 RNA5SP228-201ENST00000516232 133 ntBASIC3.54□□□□□ -1.84
HLA-DRB4X5D2U9 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC3.54□□□□□ -1.84
HLA-DRB4X5D2U9 PDCD5P1-201ENST00000543528 309 ntBASIC3.54□□□□□ -1.84
HLA-DRB4X5D2U9 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC3.54□□□□□ -1.84
HLA-DRB4X5D2U9 AC087477.6-201ENST00000559595 843 ntBASIC3.54□□□□□ -1.84
HLA-DRB4X5D2U9 AC009117.1-201ENST00000563948 554 ntBASIC3.54□□□□□ -1.84
HLA-DRB4X5D2U9 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC3.54□□□□□ -1.84
HLA-DRB4X5D2U9 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.54□□□□□ -1.84
HLA-DRB4X5D2U9 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC3.54□□□□□ -1.84
HLA-DRB4X5D2U9 AC074276.2-201ENST00000619891 348 ntBASIC3.54□□□□□ -1.84
HLA-DRB4X5D2U9 AL669942.2-201ENST00000620352 697 ntBASIC3.54□□□□□ -1.84
HLA-DRB4X5D2U9 AC087385.3-201ENST00000620477 187 ntBASIC3.54□□□□□ -1.84
HLA-DRB4X5D2U9 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC3.54□□□□□ -1.84
HLA-DRB4X5D2U9 MIR6719-201ENST00000622428 87 ntBASIC3.54□□□□□ -1.84
HLA-DRB4X5D2U9 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC3.54□□□□□ -1.84
HLA-DRB4X5D2U9 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
HLA-DRB4X5D2U9 AL445487.1-201ENST00000415694 1580 ntBASIC3.54□□□□□ -1.84
HLA-DRB4X5D2U9 RLIMP2-201ENST00000427891 1563 ntBASIC3.54□□□□□ -1.84
HLA-DRB4X5D2U9 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
HLA-DRB4X5D2U9 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC3.54□□□□□ -1.84
HLA-DRB4X5D2U9 AC131971.1-201ENST00000332881 1482 ntBASIC3.54□□□□□ -1.84
HLA-DRB4X5D2U9 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
HLA-DRB4X5D2U9 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HLA-DRB4X5D2U9 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC3.53□□□□□ -1.84
HLA-DRB4X5D2U9 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
HLA-DRB4X5D2U9 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
HLA-DRB4X5D2U9 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HLA-DRB4X5D2U9 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
HLA-DRB4X5D2U9 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HLA-DRB4X5D2U9 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC3.53□□□□□ -1.84
HLA-DRB4X5D2U9 MIR93-201ENST00000385024 80 ntBASIC3.53□□□□□ -1.84
HLA-DRB4X5D2U9 AL109941.1-201ENST00000401925 229 ntBASIC3.53□□□□□ -1.84
HLA-DRB4X5D2U9 EIF4A1P3-201ENST00000411521 244 ntBASIC3.53□□□□□ -1.84
HLA-DRB4X5D2U9 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC3.53□□□□□ -1.84
HLA-DRB4X5D2U9 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC3.53□□□□□ -1.84
HLA-DRB4X5D2U9 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC3.53□□□□□ -1.84
HLA-DRB4X5D2U9 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC3.53□□□□□ -1.84
HLA-DRB4X5D2U9 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC3.53□□□□□ -1.84
HLA-DRB4X5D2U9 GLUD1P9-201ENST00000420997 1173 ntBASIC3.53□□□□□ -1.84
HLA-DRB4X5D2U9 BX119904.1-201ENST00000432026 348 ntBASIC3.53□□□□□ -1.84
HLA-DRB4X5D2U9 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HLA-DRB4X5D2U9 AL353748.1-201ENST00000440753 474 ntBASIC3.53□□□□□ -1.84
HLA-DRB4X5D2U9 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC3.53□□□□□ -1.84
HLA-DRB4X5D2U9 AC073648.4-201ENST00000442655 781 ntBASIC3.53□□□□□ -1.84
HLA-DRB4X5D2U9 AC010733.1-201ENST00000451515 401 ntBASIC3.53□□□□□ -1.84
HLA-DRB4X5D2U9 AL356390.1-201ENST00000455684 397 ntBASIC3.53□□□□□ -1.84
HLA-DRB4X5D2U9 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC3.53□□□□□ -1.84
HLA-DRB4X5D2U9 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC3.53□□□□□ -1.84
HLA-DRB4X5D2U9 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC3.53□□□□□ -1.84
HLA-DRB4X5D2U9 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC3.53□□□□□ -1.84
HLA-DRB4X5D2U9 AC108022.1-201ENST00000493466 478 ntBASIC3.53□□□□□ -1.84
HLA-DRB4X5D2U9 NDUFB5P1-201ENST00000508134 564 ntBASIC3.53□□□□□ -1.84
HLA-DRB4X5D2U9 LDHBP3-201ENST00000514909 822 ntBASIC3.53□□□□□ -1.84
HLA-DRB4X5D2U9 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HLA-DRB4X5D2U9 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC3.53□□□□□ -1.84
HLA-DRB4X5D2U9 AP001922.4-201ENST00000526967 290 ntBASIC3.53□□□□□ -1.84
HLA-DRB4X5D2U9 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC3.53□□□□□ -1.84
HLA-DRB4X5D2U9 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC3.53□□□□□ -1.84
HLA-DRB4X5D2U9 AC093249.4-201ENST00000564755 259 ntBASIC3.53□□□□□ -1.84
HLA-DRB4X5D2U9 MIR3667-201ENST00000581025 74 ntBASIC3.53□□□□□ -1.84
HLA-DRB4X5D2U9 NPM1P45-201ENST00000583151 559 ntBASIC3.53□□□□□ -1.84
HLA-DRB4X5D2U9 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC3.53□□□□□ -1.84
HLA-DRB4X5D2U9 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC3.53□□□□□ -1.84
HLA-DRB4X5D2U9 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC3.53□□□□□ -1.84
HLA-DRB4X5D2U9 AC008638.3-201ENST00000603341 463 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms