Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
PCDHB11Q9Y5F2 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
PCDHB11Q9Y5F2 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
PCDHB11Q9Y5F2 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
PCDHB11Q9Y5F2 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC6.98□□□□□ -1.29
PCDHB11Q9Y5F2 LPAR1-205ENST00000541779 2490 ntAPPRIS ALT1 TSL 1 (best) BASIC6.98□□□□□ -1.29
PCDHB11Q9Y5F2 OR5D18-201ENST00000333976 991 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
PCDHB11Q9Y5F2 RNU6-1055P-201ENST00000391085 107 ntBASIC6.98□□□□□ -1.29
PCDHB11Q9Y5F2 RPL32P23-201ENST00000397237 405 ntBASIC6.98□□□□□ -1.29
PCDHB11Q9Y5F2 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC6.98□□□□□ -1.29
PCDHB11Q9Y5F2 GAPDHP42-201ENST00000406848 981 ntBASIC6.98□□□□□ -1.29
PCDHB11Q9Y5F2 RNU2-6P-201ENST00000411404 190 ntBASIC6.98□□□□□ -1.29
PCDHB11Q9Y5F2 AC009161.1-201ENST00000417306 376 ntBASIC6.98□□□□□ -1.29
PCDHB11Q9Y5F2 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC6.98□□□□□ -1.29
PCDHB11Q9Y5F2 SETP9-201ENST00000423837 832 ntBASIC6.98□□□□□ -1.29
PCDHB11Q9Y5F2 AC114752.2-201ENST00000424119 404 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
PCDHB11Q9Y5F2 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC6.98□□□□□ -1.29
PCDHB11Q9Y5F2 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC6.98□□□□□ -1.29
PCDHB11Q9Y5F2 IFNA20P-201ENST00000436840 528 ntBASIC6.98□□□□□ -1.29
PCDHB11Q9Y5F2 IPO7P1-201ENST00000442031 636 ntBASIC6.98□□□□□ -1.29
PCDHB11Q9Y5F2 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC6.98□□□□□ -1.29
PCDHB11Q9Y5F2 DEFA11P-201ENST00000446470 261 ntBASIC6.98□□□□□ -1.29
PCDHB11Q9Y5F2 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC6.98□□□□□ -1.29
PCDHB11Q9Y5F2 SBDSP1-204ENST00000453858 737 ntBASIC6.98□□□□□ -1.29
PCDHB11Q9Y5F2 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC6.98□□□□□ -1.29
PCDHB11Q9Y5F2 CXCR6-203ENST00000457814 1184 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
PCDHB11Q9Y5F2 AC093627.1-201ENST00000465755 877 ntTSL 3 BASIC6.98□□□□□ -1.29
PCDHB11Q9Y5F2 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC6.98□□□□□ -1.29
PCDHB11Q9Y5F2 RPS26P24-201ENST00000497656 331 ntBASIC6.98□□□□□ -1.29
PCDHB11Q9Y5F2 SRP72-202ENST00000504757 745 ntTSL 2 BASIC6.98□□□□□ -1.29
PCDHB11Q9Y5F2 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC6.98□□□□□ -1.29
PCDHB11Q9Y5F2 RNU6-1170P-201ENST00000515974 106 ntBASIC6.98□□□□□ -1.29
PCDHB11Q9Y5F2 AC120036.3-201ENST00000517826 292 ntBASIC6.98□□□□□ -1.29
PCDHB11Q9Y5F2 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC6.98□□□□□ -1.29
PCDHB11Q9Y5F2 IGHVIII-26-1-201ENST00000520387 250 ntBASIC6.98□□□□□ -1.29
PCDHB11Q9Y5F2 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC6.98□□□□□ -1.29
PCDHB11Q9Y5F2 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC6.98□□□□□ -1.29
PCDHB11Q9Y5F2 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC6.98□□□□□ -1.29
PCDHB11Q9Y5F2 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC6.98□□□□□ -1.29
PCDHB11Q9Y5F2 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC6.98□□□□□ -1.29
PCDHB11Q9Y5F2 AL031846.1-201ENST00000560933 314 ntBASIC6.98□□□□□ -1.29
PCDHB11Q9Y5F2 IGLJCOR18-201ENST00000584002 424 ntBASIC6.98□□□□□ -1.29
PCDHB11Q9Y5F2 AC136443.5-201ENST00000603741 370 ntBASIC6.98□□□□□ -1.29
PCDHB11Q9Y5F2 AC115621.1-201ENST00000604653 858 ntBASIC6.98□□□□□ -1.29
PCDHB11Q9Y5F2 AC092960.1-201ENST00000604762 351 ntBASIC6.98□□□□□ -1.29
PCDHB11Q9Y5F2 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.98□□□□□ -1.29
PCDHB11Q9Y5F2 MIR6889-201ENST00000613185 59 ntBASIC6.98□□□□□ -1.29
PCDHB11Q9Y5F2 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC6.98□□□□□ -1.29
PCDHB11Q9Y5F2 ZRANB2-AS2-220ENST00000623721 1133 ntTSL 5 BASIC6.98□□□□□ -1.29
PCDHB11Q9Y5F2 AC021106.3-201ENST00000623925 531 ntBASIC6.98□□□□□ -1.29
PCDHB11Q9Y5F2 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
PCDHB11Q9Y5F2 AP002907.1-201ENST00000606361 1430 ntBASIC6.98□□□□□ -1.29
PCDHB11Q9Y5F2 MFSD4BP1-201ENST00000513330 1552 ntBASIC6.98□□□□□ -1.29
PCDHB11Q9Y5F2 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC6.98□□□□□ -1.29
PCDHB11Q9Y5F2 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC6.98□□□□□ -1.29
PCDHB11Q9Y5F2 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC6.98□□□□□ -1.29
PCDHB11Q9Y5F2 NUP58P1-201ENST00000502546 1738 ntBASIC6.98□□□□□ -1.29
PCDHB11Q9Y5F2 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
PCDHB11Q9Y5F2 FBLN5-205ENST00000556154 1875 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
PCDHB11Q9Y5F2 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
PCDHB11Q9Y5F2 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
PCDHB11Q9Y5F2 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC6.98□□□□□ -1.29
PCDHB11Q9Y5F2 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
PCDHB11Q9Y5F2 ANKRD62P1-201ENST00000434304 1623 ntBASIC6.98□□□□□ -1.29
PCDHB11Q9Y5F2 BMX-201ENST00000342014 2499 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
PCDHB11Q9Y5F2 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
PCDHB11Q9Y5F2 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
PCDHB11Q9Y5F2 MTND5P1-201ENST00000445440 1375 ntBASIC6.97□□□□□ -1.29
PCDHB11Q9Y5F2 AL121949.2-201ENST00000403446 1548 ntBASIC6.97□□□□□ -1.29
PCDHB11Q9Y5F2 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
PCDHB11Q9Y5F2 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC6.97□□□□□ -1.29
PCDHB11Q9Y5F2 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
PCDHB11Q9Y5F2 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC6.97□□□□□ -1.29
PCDHB11Q9Y5F2 Y_RNA.387-201ENST00000383918 102 ntBASIC6.97□□□□□ -1.29
PCDHB11Q9Y5F2 RNU6-463P-201ENST00000384340 107 ntBASIC6.97□□□□□ -1.29
PCDHB11Q9Y5F2 AL590762.1-201ENST00000391782 432 ntBASIC6.97□□□□□ -1.29
PCDHB11Q9Y5F2 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC6.97□□□□□ -1.29
PCDHB11Q9Y5F2 FDPSP5-201ENST00000399474 1057 ntBASIC6.97□□□□□ -1.29
PCDHB11Q9Y5F2 CCDC148-AS1-201ENST00000412781 795 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
PCDHB11Q9Y5F2 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC6.97□□□□□ -1.29
PCDHB11Q9Y5F2 AL157932.1-201ENST00000413246 363 ntTSL 3 BASIC6.97□□□□□ -1.29
PCDHB11Q9Y5F2 AC012462.2-201ENST00000414756 391 ntTSL 3 BASIC6.97□□□□□ -1.29
PCDHB11Q9Y5F2 AC073136.2-201ENST00000417282 849 ntBASIC6.97□□□□□ -1.29
PCDHB11Q9Y5F2 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC6.97□□□□□ -1.29
PCDHB11Q9Y5F2 SLC35E1P1-201ENST00000419313 864 ntBASIC6.97□□□□□ -1.29
PCDHB11Q9Y5F2 MTCYBP8-201ENST00000422855 651 ntBASIC6.97□□□□□ -1.29
PCDHB11Q9Y5F2 AC004870.2-202ENST00000423781 706 ntTSL 3 BASIC6.97□□□□□ -1.29
PCDHB11Q9Y5F2 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC6.97□□□□□ -1.29
PCDHB11Q9Y5F2 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC6.97□□□□□ -1.29
PCDHB11Q9Y5F2 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC6.97□□□□□ -1.29
PCDHB11Q9Y5F2 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC6.97□□□□□ -1.29
PCDHB11Q9Y5F2 AC006335.2-201ENST00000437993 330 ntBASIC6.97□□□□□ -1.29
PCDHB11Q9Y5F2 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC6.97□□□□□ -1.29
PCDHB11Q9Y5F2 HIGD1AP16-201ENST00000450986 258 ntBASIC6.97□□□□□ -1.29
PCDHB11Q9Y5F2 AC005165.2-201ENST00000466070 380 ntBASIC6.97□□□□□ -1.29
PCDHB11Q9Y5F2 RPL23AP12-201ENST00000467573 473 ntBASIC6.97□□□□□ -1.29
PCDHB11Q9Y5F2 AC021074.2-201ENST00000468434 172 ntBASIC6.97□□□□□ -1.29
PCDHB11Q9Y5F2 RN7SL741P-201ENST00000482473 289 ntBASIC6.97□□□□□ -1.29
PCDHB11Q9Y5F2 RN7SL868P-201ENST00000485915 303 ntBASIC6.97□□□□□ -1.29
PCDHB11Q9Y5F2 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms