Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AL135786.2-201ENST00000608422 615 ntBASIC6.3□□□□□ -1.4
CTDP1Q9Y5B0 AC090425.2-201ENST00000608818 501 ntBASIC6.3□□□□□ -1.4
CTDP1Q9Y5B0 AC009163.6-201ENST00000612367 342 ntBASIC6.3□□□□□ -1.4
CTDP1Q9Y5B0 AL121890.2-201ENST00000617644 465 ntBASIC6.3□□□□□ -1.4
CTDP1Q9Y5B0 AC022079.2-201ENST00000619739 566 ntBASIC6.3□□□□□ -1.4
CTDP1Q9Y5B0 AC104985.3-201ENST00000623479 597 ntBASIC6.3□□□□□ -1.4
CTDP1Q9Y5B0 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC6.3□□□□□ -1.4
CTDP1Q9Y5B0 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC6.3□□□□□ -1.4
CTDP1Q9Y5B0 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC6.3□□□□□ -1.4
CTDP1Q9Y5B0 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC6.3□□□□□ -1.4
CTDP1Q9Y5B0 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
CTDP1Q9Y5B0 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CTDP1Q9Y5B0 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC6.3□□□□□ -1.4
CTDP1Q9Y5B0 MTND4P5-201ENST00000435821 1374 ntBASIC6.3□□□□□ -1.4
CTDP1Q9Y5B0 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC6.3□□□□□ -1.4
CTDP1Q9Y5B0 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
CTDP1Q9Y5B0 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CTDP1Q9Y5B0 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.29□□□□□ -1.4
CTDP1Q9Y5B0 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
CTDP1Q9Y5B0 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC6.29□□□□□ -1.4
CTDP1Q9Y5B0 AC008549.2-201ENST00000333482 706 ntBASIC6.29□□□□□ -1.4
CTDP1Q9Y5B0 SNORA58B-201ENST00000364259 136 ntBASIC6.29□□□□□ -1.4
CTDP1Q9Y5B0 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC6.29□□□□□ -1.4
CTDP1Q9Y5B0 RPSAP35-201ENST00000413753 818 ntBASIC6.29□□□□□ -1.4
CTDP1Q9Y5B0 OR10T1P-201ENST00000424327 947 ntBASIC6.29□□□□□ -1.4
CTDP1Q9Y5B0 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CTDP1Q9Y5B0 NPM1P22-201ENST00000427761 952 ntBASIC6.29□□□□□ -1.4
CTDP1Q9Y5B0 AL160175.1-201ENST00000428124 247 ntBASIC6.29□□□□□ -1.4
CTDP1Q9Y5B0 RPL7P56-201ENST00000429441 717 ntBASIC6.29□□□□□ -1.4
CTDP1Q9Y5B0 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC6.29□□□□□ -1.4
CTDP1Q9Y5B0 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC6.29□□□□□ -1.4
CTDP1Q9Y5B0 RPL12P17-201ENST00000432393 498 ntBASIC6.29□□□□□ -1.4
CTDP1Q9Y5B0 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC6.29□□□□□ -1.4
CTDP1Q9Y5B0 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CTDP1Q9Y5B0 RAB28P3-201ENST00000448325 597 ntBASIC6.29□□□□□ -1.4
CTDP1Q9Y5B0 NPM1P39-201ENST00000449818 867 ntBASIC6.29□□□□□ -1.4
CTDP1Q9Y5B0 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC6.29□□□□□ -1.4
CTDP1Q9Y5B0 RN7SL222P-201ENST00000476452 299 ntBASIC6.29□□□□□ -1.4
CTDP1Q9Y5B0 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC6.29□□□□□ -1.4
CTDP1Q9Y5B0 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC6.29□□□□□ -1.4
CTDP1Q9Y5B0 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC6.29□□□□□ -1.4
CTDP1Q9Y5B0 NPM1P42-201ENST00000560329 862 ntBASIC6.29□□□□□ -1.4
CTDP1Q9Y5B0 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC6.29□□□□□ -1.4
CTDP1Q9Y5B0 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC6.29□□□□□ -1.4
CTDP1Q9Y5B0 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC6.29□□□□□ -1.4
CTDP1Q9Y5B0 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC6.29□□□□□ -1.4
CTDP1Q9Y5B0 AC245100.7-201ENST00000609678 442 ntBASIC6.29□□□□□ -1.4
CTDP1Q9Y5B0 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC6.29□□□□□ -1.4
CTDP1Q9Y5B0 AL139407.1-201ENST00000613826 1175 ntBASIC6.29□□□□□ -1.4
CTDP1Q9Y5B0 AC008121.2-201ENST00000614647 523 ntBASIC6.29□□□□□ -1.4
CTDP1Q9Y5B0 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC6.29□□□□□ -1.4
CTDP1Q9Y5B0 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC6.29□□□□□ -1.4
CTDP1Q9Y5B0 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC6.29□□□□□ -1.4
CTDP1Q9Y5B0 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CTDP1Q9Y5B0 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CTDP1Q9Y5B0 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC6.29□□□□□ -1.4
CTDP1Q9Y5B0 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC6.29□□□□□ -1.4
CTDP1Q9Y5B0 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CTDP1Q9Y5B0 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.29□□□□□ -1.4
CTDP1Q9Y5B0 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
CTDP1Q9Y5B0 AC053481.2-202ENST00000582394 1500 ntBASIC6.29□□□□□ -1.4
CTDP1Q9Y5B0 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CTDP1Q9Y5B0 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CTDP1Q9Y5B0 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
CTDP1Q9Y5B0 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC6.28□□□□□ -1.4
CTDP1Q9Y5B0 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
CTDP1Q9Y5B0 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC6.28□□□□□ -1.4
CTDP1Q9Y5B0 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
CTDP1Q9Y5B0 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CTDP1Q9Y5B0 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
CTDP1Q9Y5B0 RNU4-68P-201ENST00000364314 141 ntBASIC6.28□□□□□ -1.4
CTDP1Q9Y5B0 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
CTDP1Q9Y5B0 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
CTDP1Q9Y5B0 RNA5SP487-201ENST00000410186 122 ntBASIC6.28□□□□□ -1.4
CTDP1Q9Y5B0 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC6.28□□□□□ -1.4
CTDP1Q9Y5B0 MFSD13B-201ENST00000420133 1290 ntBASIC6.28□□□□□ -1.4
CTDP1Q9Y5B0 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC6.28□□□□□ -1.4
CTDP1Q9Y5B0 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC6.28□□□□□ -1.4
CTDP1Q9Y5B0 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC6.28□□□□□ -1.4
CTDP1Q9Y5B0 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC6.28□□□□□ -1.4
CTDP1Q9Y5B0 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC6.28□□□□□ -1.4
CTDP1Q9Y5B0 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC6.28□□□□□ -1.4
CTDP1Q9Y5B0 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC6.28□□□□□ -1.4
CTDP1Q9Y5B0 AL645937.3-201ENST00000453647 936 ntBASIC6.28□□□□□ -1.4
CTDP1Q9Y5B0 PSAT1P4-201ENST00000466500 526 ntBASIC6.28□□□□□ -1.4
CTDP1Q9Y5B0 AC105918.1-201ENST00000474399 838 ntBASIC6.28□□□□□ -1.4
CTDP1Q9Y5B0 RPL7P40-201ENST00000481703 745 ntBASIC6.28□□□□□ -1.4
CTDP1Q9Y5B0 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC6.28□□□□□ -1.4
CTDP1Q9Y5B0 AC021087.2-201ENST00000504656 1203 ntBASIC6.28□□□□□ -1.4
CTDP1Q9Y5B0 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC6.28□□□□□ -1.4
CTDP1Q9Y5B0 AC118282.2-201ENST00000508739 374 ntBASIC6.28□□□□□ -1.4
CTDP1Q9Y5B0 RFESD-208ENST00000513950 464 ntTSL 5 BASIC6.28□□□□□ -1.4
CTDP1Q9Y5B0 RNU6-941P-201ENST00000516346 108 ntBASIC6.28□□□□□ -1.4
CTDP1Q9Y5B0 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC6.28□□□□□ -1.4
CTDP1Q9Y5B0 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC6.28□□□□□ -1.4
CTDP1Q9Y5B0 LRRC6P1-201ENST00000532188 885 ntBASIC6.28□□□□□ -1.4
CTDP1Q9Y5B0 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC6.28□□□□□ -1.4
CTDP1Q9Y5B0 AC122688.1-201ENST00000541494 223 ntBASIC6.28□□□□□ -1.4
CTDP1Q9Y5B0 MIR3691-201ENST00000578066 90 ntBASIC6.28□□□□□ -1.4
CTDP1Q9Y5B0 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms