Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 AC025946.2-201ENST00000603398 234 ntBASIC4.05□□□□□ -1.76
KCNIP3Q9Y2W7 AC078899.5-201ENST00000612475 178 ntBASIC4.05□□□□□ -1.76
KCNIP3Q9Y2W7 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC4.05□□□□□ -1.76
KCNIP3Q9Y2W7 AC074276.2-201ENST00000619891 348 ntBASIC4.05□□□□□ -1.76
KCNIP3Q9Y2W7 AC015804.1-201ENST00000622935 435 ntBASIC4.05□□□□□ -1.76
KCNIP3Q9Y2W7 AC020763.5-201ENST00000623298 430 ntBASIC4.05□□□□□ -1.76
KCNIP3Q9Y2W7 LINC00216-201ENST00000623548 1126 ntBASIC4.05□□□□□ -1.76
KCNIP3Q9Y2W7 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.05□□□□□ -1.76
KCNIP3Q9Y2W7 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.05□□□□□ -1.76
KCNIP3Q9Y2W7 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
KCNIP3Q9Y2W7 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
KCNIP3Q9Y2W7 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
KCNIP3Q9Y2W7 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
KCNIP3Q9Y2W7 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.05□□□□□ -1.76
KCNIP3Q9Y2W7 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
KCNIP3Q9Y2W7 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
KCNIP3Q9Y2W7 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.05□□□□□ -1.76
KCNIP3Q9Y2W7 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
KCNIP3Q9Y2W7 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
KCNIP3Q9Y2W7 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
KCNIP3Q9Y2W7 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
KCNIP3Q9Y2W7 RNU1-108P-201ENST00000362556 161 ntBASIC4.04□□□□□ -1.76
KCNIP3Q9Y2W7 RNU6-304P-201ENST00000364855 107 ntBASIC4.04□□□□□ -1.76
KCNIP3Q9Y2W7 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC4.04□□□□□ -1.76
KCNIP3Q9Y2W7 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
KCNIP3Q9Y2W7 RNU1-77P-201ENST00000390868 162 ntBASIC4.04□□□□□ -1.76
KCNIP3Q9Y2W7 AL136116.2-201ENST00000404020 785 ntBASIC4.04□□□□□ -1.76
KCNIP3Q9Y2W7 HDGFP1-201ENST00000405943 252 ntBASIC4.04□□□□□ -1.76
KCNIP3Q9Y2W7 RN7SKP114-201ENST00000410327 279 ntBASIC4.04□□□□□ -1.76
KCNIP3Q9Y2W7 AL390774.1-201ENST00000411924 246 ntBASIC4.04□□□□□ -1.76
KCNIP3Q9Y2W7 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.04□□□□□ -1.76
KCNIP3Q9Y2W7 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC4.04□□□□□ -1.76
KCNIP3Q9Y2W7 AC048351.1-201ENST00000420064 602 ntBASIC4.04□□□□□ -1.76
KCNIP3Q9Y2W7 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC4.04□□□□□ -1.76
KCNIP3Q9Y2W7 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.04□□□□□ -1.76
KCNIP3Q9Y2W7 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.04□□□□□ -1.76
KCNIP3Q9Y2W7 CYCSP6-201ENST00000434498 302 ntBASIC4.04□□□□□ -1.76
KCNIP3Q9Y2W7 AL353597.2-202ENST00000434901 373 ntBASIC4.04□□□□□ -1.76
KCNIP3Q9Y2W7 CLNS1AP1-201ENST00000435954 682 ntBASIC4.04□□□□□ -1.76
KCNIP3Q9Y2W7 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.04□□□□□ -1.76
KCNIP3Q9Y2W7 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC4.04□□□□□ -1.76
KCNIP3Q9Y2W7 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
KCNIP3Q9Y2W7 PRELID3BP7-201ENST00000503606 469 ntBASIC4.04□□□□□ -1.76
KCNIP3Q9Y2W7 AC010350.1-201ENST00000504908 231 ntBASIC4.04□□□□□ -1.76
KCNIP3Q9Y2W7 OR51K1P-201ENST00000510214 950 ntBASIC4.04□□□□□ -1.76
KCNIP3Q9Y2W7 AC108157.1-201ENST00000510511 539 ntBASIC4.04□□□□□ -1.76
KCNIP3Q9Y2W7 AC093770.1-201ENST00000511559 571 ntBASIC4.04□□□□□ -1.76
KCNIP3Q9Y2W7 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
KCNIP3Q9Y2W7 RN7SKP260-201ENST00000516907 149 ntBASIC4.04□□□□□ -1.76
KCNIP3Q9Y2W7 AC090819.1-201ENST00000523800 1111 ntBASIC4.04□□□□□ -1.76
KCNIP3Q9Y2W7 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC4.04□□□□□ -1.76
KCNIP3Q9Y2W7 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC4.04□□□□□ -1.76
KCNIP3Q9Y2W7 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.04□□□□□ -1.76
KCNIP3Q9Y2W7 AC134349.2-201ENST00000535136 910 ntBASIC4.04□□□□□ -1.76
KCNIP3Q9Y2W7 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
KCNIP3Q9Y2W7 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC4.04□□□□□ -1.76
KCNIP3Q9Y2W7 NANOGNBP2-201ENST00000544753 553 ntBASIC4.04□□□□□ -1.76
KCNIP3Q9Y2W7 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.04□□□□□ -1.76
KCNIP3Q9Y2W7 NMNAT1P1-201ENST00000554095 876 ntBASIC4.04□□□□□ -1.76
KCNIP3Q9Y2W7 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC4.04□□□□□ -1.76
KCNIP3Q9Y2W7 AC018552.3-201ENST00000567416 561 ntBASIC4.04□□□□□ -1.76
KCNIP3Q9Y2W7 TVP23CP2-201ENST00000571473 623 ntBASIC4.04□□□□□ -1.76
KCNIP3Q9Y2W7 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC4.04□□□□□ -1.76
KCNIP3Q9Y2W7 AC008536.1-201ENST00000602872 669 ntBASIC4.04□□□□□ -1.76
KCNIP3Q9Y2W7 AC005520.3-201ENST00000602874 370 ntBASIC4.04□□□□□ -1.76
KCNIP3Q9Y2W7 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.04□□□□□ -1.76
KCNIP3Q9Y2W7 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.04□□□□□ -1.76
KCNIP3Q9Y2W7 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
KCNIP3Q9Y2W7 AL096712.1-201ENST00000614561 159 ntBASIC4.04□□□□□ -1.76
KCNIP3Q9Y2W7 AC067852.7-201ENST00000623270 535 ntBASIC4.04□□□□□ -1.76
KCNIP3Q9Y2W7 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.04□□□□□ -1.76
KCNIP3Q9Y2W7 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
KCNIP3Q9Y2W7 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
KCNIP3Q9Y2W7 PANDAR-201ENST00000629595 1506 ntBASIC4.04□□□□□ -1.76
KCNIP3Q9Y2W7 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
KCNIP3Q9Y2W7 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
KCNIP3Q9Y2W7 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
KCNIP3Q9Y2W7 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
KCNIP3Q9Y2W7 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.03□□□□□ -1.76
KCNIP3Q9Y2W7 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.03□□□□□ -1.76
KCNIP3Q9Y2W7 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
KCNIP3Q9Y2W7 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
KCNIP3Q9Y2W7 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
KCNIP3Q9Y2W7 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
KCNIP3Q9Y2W7 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
KCNIP3Q9Y2W7 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.03□□□□□ -1.76
KCNIP3Q9Y2W7 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.03□□□□□ -1.76
KCNIP3Q9Y2W7 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
KCNIP3Q9Y2W7 RNA5SP234-201ENST00000363916 119 ntBASIC4.03□□□□□ -1.76
KCNIP3Q9Y2W7 SNORD96B-201ENST00000386148 79 ntBASIC4.03□□□□□ -1.76
KCNIP3Q9Y2W7 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
KCNIP3Q9Y2W7 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC4.03□□□□□ -1.76
KCNIP3Q9Y2W7 RNA5SP104-201ENST00000410989 118 ntBASIC4.03□□□□□ -1.76
KCNIP3Q9Y2W7 RPL6P29-201ENST00000414863 865 ntBASIC4.03□□□□□ -1.76
KCNIP3Q9Y2W7 AC004552.1-201ENST00000419089 348 ntBASIC4.03□□□□□ -1.76
KCNIP3Q9Y2W7 PDSS1P1-201ENST00000422953 1114 ntBASIC4.03□□□□□ -1.76
KCNIP3Q9Y2W7 BX323845.1-201ENST00000432417 179 ntBASIC4.03□□□□□ -1.76
KCNIP3Q9Y2W7 AC023512.1-201ENST00000444513 499 ntBASIC4.03□□□□□ -1.76
KCNIP3Q9Y2W7 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.03□□□□□ -1.76
KCNIP3Q9Y2W7 AC104651.2-201ENST00000447549 528 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms