Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC4.21□□□□□ -1.74
CLCF1Q9UBD9 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.21□□□□□ -1.74
CLCF1Q9UBD9 GSTP1P1-201ENST00000548078 319 ntBASIC4.21□□□□□ -1.74
CLCF1Q9UBD9 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
CLCF1Q9UBD9 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.21□□□□□ -1.74
CLCF1Q9UBD9 AC209154.1-201ENST00000582156 337 ntBASIC4.21□□□□□ -1.74
CLCF1Q9UBD9 MIR5096-201ENST00000583713 70 ntBASIC4.21□□□□□ -1.74
CLCF1Q9UBD9 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.21□□□□□ -1.74
CLCF1Q9UBD9 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC4.21□□□□□ -1.74
CLCF1Q9UBD9 OR7A19P-201ENST00000608051 733 ntBASIC4.21□□□□□ -1.74
CLCF1Q9UBD9 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CLCF1Q9UBD9 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.21□□□□□ -1.74
CLCF1Q9UBD9 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.21□□□□□ -1.74
CLCF1Q9UBD9 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.21□□□□□ -1.74
CLCF1Q9UBD9 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.21□□□□□ -1.74
CLCF1Q9UBD9 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.21□□□□□ -1.74
CLCF1Q9UBD9 AL731532.2-201ENST00000623542 1953 ntBASIC4.21□□□□□ -1.74
CLCF1Q9UBD9 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CLCF1Q9UBD9 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
CLCF1Q9UBD9 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
CLCF1Q9UBD9 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CLCF1Q9UBD9 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.21□□□□□ -1.74
CLCF1Q9UBD9 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CLCF1Q9UBD9 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CLCF1Q9UBD9 DDX18P5-201ENST00000534547 1306 ntBASIC4.21□□□□□ -1.74
CLCF1Q9UBD9 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
CLCF1Q9UBD9 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.2□□□□□ -1.74
CLCF1Q9UBD9 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
CLCF1Q9UBD9 Z98755.1-201ENST00000407015 1384 ntBASIC4.2□□□□□ -1.74
CLCF1Q9UBD9 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CLCF1Q9UBD9 SNORD113.2-201ENST00000364166 89 ntBASIC4.2□□□□□ -1.74
CLCF1Q9UBD9 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CLCF1Q9UBD9 MIR141-201ENST00000384975 95 ntBASIC4.2□□□□□ -1.74
CLCF1Q9UBD9 MIR137-201ENST00000385223 102 ntBASIC4.2□□□□□ -1.74
CLCF1Q9UBD9 U3.35-201ENST00000408405 208 ntBASIC4.2□□□□□ -1.74
CLCF1Q9UBD9 OR13Z1P-201ENST00000416141 834 ntBASIC4.2□□□□□ -1.74
CLCF1Q9UBD9 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.2□□□□□ -1.74
CLCF1Q9UBD9 RGS17P1-201ENST00000423358 553 ntBASIC4.2□□□□□ -1.74
CLCF1Q9UBD9 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.2□□□□□ -1.74
CLCF1Q9UBD9 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC4.2□□□□□ -1.74
CLCF1Q9UBD9 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.2□□□□□ -1.74
CLCF1Q9UBD9 H2AFZP5-201ENST00000446960 382 ntBASIC4.2□□□□□ -1.74
CLCF1Q9UBD9 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC4.2□□□□□ -1.74
CLCF1Q9UBD9 TPT1P1-201ENST00000458495 518 ntBASIC4.2□□□□□ -1.74
CLCF1Q9UBD9 OR52A4P-201ENST00000472867 958 ntBASIC4.2□□□□□ -1.74
CLCF1Q9UBD9 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.2□□□□□ -1.74
CLCF1Q9UBD9 RPL36AP41-201ENST00000493820 306 ntBASIC4.2□□□□□ -1.74
CLCF1Q9UBD9 AC025164.1-201ENST00000496249 478 ntBASIC4.2□□□□□ -1.74
CLCF1Q9UBD9 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CLCF1Q9UBD9 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.2□□□□□ -1.74
CLCF1Q9UBD9 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.2□□□□□ -1.74
CLCF1Q9UBD9 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.2□□□□□ -1.74
CLCF1Q9UBD9 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.2□□□□□ -1.74
CLCF1Q9UBD9 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.2□□□□□ -1.74
CLCF1Q9UBD9 AC117525.1-201ENST00000515228 503 ntBASIC4.2□□□□□ -1.74
CLCF1Q9UBD9 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC4.2□□□□□ -1.74
CLCF1Q9UBD9 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC4.2□□□□□ -1.74
CLCF1Q9UBD9 RAB9BP1-201ENST00000519581 626 ntBASIC4.2□□□□□ -1.74
CLCF1Q9UBD9 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.2□□□□□ -1.74
CLCF1Q9UBD9 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.2□□□□□ -1.74
CLCF1Q9UBD9 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC4.2□□□□□ -1.74
CLCF1Q9UBD9 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC4.2□□□□□ -1.74
CLCF1Q9UBD9 RN7SL652P-201ENST00000577769 300 ntBASIC4.2□□□□□ -1.74
CLCF1Q9UBD9 MIR3936-201ENST00000584304 110 ntBASIC4.2□□□□□ -1.74
CLCF1Q9UBD9 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC4.2□□□□□ -1.74
CLCF1Q9UBD9 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC4.2□□□□□ -1.74
CLCF1Q9UBD9 AC020915.5-201ENST00000596836 964 ntBASIC4.2□□□□□ -1.74
CLCF1Q9UBD9 AF230666.2-201ENST00000602328 725 ntBASIC4.2□□□□□ -1.74
CLCF1Q9UBD9 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.2□□□□□ -1.74
CLCF1Q9UBD9 AC073137.1-201ENST00000605636 634 ntBASIC4.2□□□□□ -1.74
CLCF1Q9UBD9 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.2□□□□□ -1.74
CLCF1Q9UBD9 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
CLCF1Q9UBD9 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
CLCF1Q9UBD9 AL121950.1-201ENST00000624993 2077 ntBASIC4.2□□□□□ -1.74
CLCF1Q9UBD9 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
CLCF1Q9UBD9 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
CLCF1Q9UBD9 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.2□□□□□ -1.74
CLCF1Q9UBD9 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
CLCF1Q9UBD9 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CLCF1Q9UBD9 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.19□□□□□ -1.74
CLCF1Q9UBD9 AL034370.1-201ENST00000397254 1590 ntBASIC4.19□□□□□ -1.74
CLCF1Q9UBD9 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.19□□□□□ -1.74
CLCF1Q9UBD9 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CLCF1Q9UBD9 CNOT6LP1-201ENST00000559681 1462 ntBASIC4.19□□□□□ -1.74
CLCF1Q9UBD9 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.19□□□□□ -1.74
CLCF1Q9UBD9 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CLCF1Q9UBD9 BTBD10P1-201ENST00000549824 1352 ntBASIC4.19□□□□□ -1.74
CLCF1Q9UBD9 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
CLCF1Q9UBD9 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CLCF1Q9UBD9 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CLCF1Q9UBD9 ARL4AP5-201ENST00000404372 599 ntBASIC4.19□□□□□ -1.74
CLCF1Q9UBD9 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
CLCF1Q9UBD9 AC016397.1-201ENST00000412463 242 ntBASIC4.19□□□□□ -1.74
CLCF1Q9UBD9 TRIM60P17-201ENST00000415181 719 ntBASIC4.19□□□□□ -1.74
CLCF1Q9UBD9 AJ239321.1-201ENST00000424255 564 ntBASIC4.19□□□□□ -1.74
CLCF1Q9UBD9 NIPA2P1-201ENST00000426223 976 ntBASIC4.19□□□□□ -1.74
CLCF1Q9UBD9 DNAJC19P7-201ENST00000428811 344 ntBASIC4.19□□□□□ -1.74
CLCF1Q9UBD9 CNOT7P1-201ENST00000429006 852 ntBASIC4.19□□□□□ -1.74
CLCF1Q9UBD9 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.19□□□□□ -1.74
CLCF1Q9UBD9 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms