Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 AC008033.2-201ENST00000542626 177 ntBASIC4.33□□□□□ -1.72
VAPAQ9P0L0 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.33□□□□□ -1.72
VAPAQ9P0L0 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC4.33□□□□□ -1.72
VAPAQ9P0L0 MTND2P13-201ENST00000577438 1039 ntBASIC4.33□□□□□ -1.72
VAPAQ9P0L0 RN7SL652P-201ENST00000577769 300 ntBASIC4.33□□□□□ -1.72
VAPAQ9P0L0 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.33□□□□□ -1.72
VAPAQ9P0L0 AC008759.1-201ENST00000589783 983 ntBASIC4.33□□□□□ -1.72
VAPAQ9P0L0 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.33□□□□□ -1.72
VAPAQ9P0L0 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.33□□□□□ -1.72
VAPAQ9P0L0 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.33□□□□□ -1.72
VAPAQ9P0L0 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.33□□□□□ -1.72
VAPAQ9P0L0 AC090181.2-201ENST00000602975 672 ntBASIC4.33□□□□□ -1.72
VAPAQ9P0L0 AC010201.1-201ENST00000605051 540 ntBASIC4.33□□□□□ -1.72
VAPAQ9P0L0 SNORA35B-201ENST00000607417 129 ntBASIC4.33□□□□□ -1.72
VAPAQ9P0L0 AC023813.4-201ENST00000607580 580 ntBASIC4.33□□□□□ -1.72
VAPAQ9P0L0 MIR6768-201ENST00000610734 72 ntBASIC4.33□□□□□ -1.72
VAPAQ9P0L0 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
VAPAQ9P0L0 AL158196.1-201ENST00000616786 434 ntBASIC4.33□□□□□ -1.72
VAPAQ9P0L0 AC091905.2-201ENST00000623143 306 ntBASIC4.33□□□□□ -1.72
VAPAQ9P0L0 AC091905.4-201ENST00000623432 202 ntBASIC4.33□□□□□ -1.72
VAPAQ9P0L0 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC4.33□□□□□ -1.72
VAPAQ9P0L0 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
VAPAQ9P0L0 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.33□□□□□ -1.72
VAPAQ9P0L0 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
VAPAQ9P0L0 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
VAPAQ9P0L0 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.32□□□□□ -1.72
VAPAQ9P0L0 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.32□□□□□ -1.72
VAPAQ9P0L0 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
VAPAQ9P0L0 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.32□□□□□ -1.72
VAPAQ9P0L0 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
VAPAQ9P0L0 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
VAPAQ9P0L0 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
VAPAQ9P0L0 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.32□□□□□ -1.72
VAPAQ9P0L0 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
VAPAQ9P0L0 RNA5SP123-201ENST00000363244 119 ntBASIC4.32□□□□□ -1.72
VAPAQ9P0L0 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
VAPAQ9P0L0 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.32□□□□□ -1.72
VAPAQ9P0L0 CHMP1B2P-201ENST00000399581 597 ntBASIC4.32□□□□□ -1.72
VAPAQ9P0L0 DPPA2P3-201ENST00000411853 655 ntBASIC4.32□□□□□ -1.72
VAPAQ9P0L0 AC140479.3-201ENST00000418944 1126 ntBASIC4.32□□□□□ -1.72
VAPAQ9P0L0 AP000936.3-201ENST00000438127 255 ntBASIC4.32□□□□□ -1.72
VAPAQ9P0L0 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.32□□□□□ -1.72
VAPAQ9P0L0 OR52J1P-201ENST00000450596 932 ntBASIC4.32□□□□□ -1.72
VAPAQ9P0L0 EIF2S2P5-201ENST00000457635 968 ntBASIC4.32□□□□□ -1.72
VAPAQ9P0L0 UBA52P3-201ENST00000491303 382 ntBASIC4.32□□□□□ -1.72
VAPAQ9P0L0 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.32□□□□□ -1.72
VAPAQ9P0L0 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
VAPAQ9P0L0 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.32□□□□□ -1.72
VAPAQ9P0L0 HAUS8P1-201ENST00000549005 542 ntBASIC4.32□□□□□ -1.72
VAPAQ9P0L0 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.32□□□□□ -1.72
VAPAQ9P0L0 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.32□□□□□ -1.72
VAPAQ9P0L0 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.32□□□□□ -1.72
VAPAQ9P0L0 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC4.32□□□□□ -1.72
VAPAQ9P0L0 ADAD1P2-201ENST00000588476 646 ntBASIC4.32□□□□□ -1.72
VAPAQ9P0L0 AC103792.1-201ENST00000603591 919 ntBASIC4.32□□□□□ -1.72
VAPAQ9P0L0 SUMO2P15-201ENST00000604285 278 ntBASIC4.32□□□□□ -1.72
VAPAQ9P0L0 AL121612.2-201ENST00000612261 482 ntBASIC4.32□□□□□ -1.72
VAPAQ9P0L0 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
VAPAQ9P0L0 AC009950.2-201ENST00000636548 183 ntBASIC4.32□□□□□ -1.72
VAPAQ9P0L0 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
VAPAQ9P0L0 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.32□□□□□ -1.72
VAPAQ9P0L0 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
VAPAQ9P0L0 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
VAPAQ9P0L0 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
VAPAQ9P0L0 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
VAPAQ9P0L0 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.31□□□□□ -1.72
VAPAQ9P0L0 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
VAPAQ9P0L0 AC027290.2-201ENST00000623210 18662 ntBASIC4.31□□□□□ -1.72
VAPAQ9P0L0 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
VAPAQ9P0L0 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
VAPAQ9P0L0 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC4.31□□□□□ -1.72
VAPAQ9P0L0 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
VAPAQ9P0L0 AC233968.1-201ENST00000611212 1300 ntBASIC4.31□□□□□ -1.72
VAPAQ9P0L0 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
VAPAQ9P0L0 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.31□□□□□ -1.72
VAPAQ9P0L0 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.31□□□□□ -1.72
VAPAQ9P0L0 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
VAPAQ9P0L0 RNA5SP22-201ENST00000365393 109 ntBASIC4.31□□□□□ -1.72
VAPAQ9P0L0 RNU1-63P-201ENST00000383902 164 ntBASIC4.31□□□□□ -1.72
VAPAQ9P0L0 FCF1P5-201ENST00000406490 482 ntBASIC4.31□□□□□ -1.72
VAPAQ9P0L0 RN7SKP267-201ENST00000410381 285 ntBASIC4.31□□□□□ -1.72
VAPAQ9P0L0 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.31□□□□□ -1.72
VAPAQ9P0L0 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
VAPAQ9P0L0 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC4.31□□□□□ -1.72
VAPAQ9P0L0 AC092570.3-201ENST00000420113 693 ntBASIC4.31□□□□□ -1.72
VAPAQ9P0L0 AL355433.1-201ENST00000422804 300 ntBASIC4.31□□□□□ -1.72
VAPAQ9P0L0 GTF2IP2-201ENST00000424290 697 ntBASIC4.31□□□□□ -1.72
VAPAQ9P0L0 AC007559.1-201ENST00000428736 355 ntBASIC4.31□□□□□ -1.72
VAPAQ9P0L0 CDY14P-201ENST00000431260 1014 ntBASIC4.31□□□□□ -1.72
VAPAQ9P0L0 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.31□□□□□ -1.72
VAPAQ9P0L0 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.31□□□□□ -1.72
VAPAQ9P0L0 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC4.31□□□□□ -1.72
VAPAQ9P0L0 CDY12P-201ENST00000440679 1015 ntBASIC4.31□□□□□ -1.72
VAPAQ9P0L0 CDY13P-201ENST00000445813 1015 ntBASIC4.31□□□□□ -1.72
VAPAQ9P0L0 CDY23P-201ENST00000451661 1014 ntBASIC4.31□□□□□ -1.72
VAPAQ9P0L0 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.31□□□□□ -1.72
VAPAQ9P0L0 AL356390.1-201ENST00000455684 397 ntBASIC4.31□□□□□ -1.72
VAPAQ9P0L0 PSMC1P13-201ENST00000458195 985 ntBASIC4.31□□□□□ -1.72
VAPAQ9P0L0 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.31□□□□□ -1.72
VAPAQ9P0L0 RPL5P30-201ENST00000465511 891 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms