Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.28□□□□□ -1.56
AMBRA1Q9C0C7 AC066692.1-201ENST00000421721 457 ntBASIC5.28□□□□□ -1.56
AMBRA1Q9C0C7 RPL23AP4-201ENST00000427757 463 ntBASIC5.28□□□□□ -1.56
AMBRA1Q9C0C7 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC5.28□□□□□ -1.56
AMBRA1Q9C0C7 MTCO1P52-201ENST00000433928 531 ntBASIC5.28□□□□□ -1.56
AMBRA1Q9C0C7 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC5.28□□□□□ -1.56
AMBRA1Q9C0C7 AC005002.1-201ENST00000447458 540 ntBASIC5.28□□□□□ -1.56
AMBRA1Q9C0C7 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC5.28□□□□□ -1.56
AMBRA1Q9C0C7 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.28□□□□□ -1.56
AMBRA1Q9C0C7 AC007998.1-201ENST00000474156 672 ntBASIC5.28□□□□□ -1.56
AMBRA1Q9C0C7 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
AMBRA1Q9C0C7 AC108734.3-201ENST00000481241 1165 ntBASIC5.28□□□□□ -1.56
AMBRA1Q9C0C7 AC099521.1-201ENST00000482557 334 ntBASIC5.28□□□□□ -1.56
AMBRA1Q9C0C7 AC073610.1-201ENST00000489971 396 ntBASIC5.28□□□□□ -1.56
AMBRA1Q9C0C7 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
AMBRA1Q9C0C7 AC008638.1-201ENST00000506035 866 ntBASIC5.28□□□□□ -1.56
AMBRA1Q9C0C7 AC104108.1-201ENST00000509930 412 ntBASIC5.28□□□□□ -1.56
AMBRA1Q9C0C7 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.28□□□□□ -1.56
AMBRA1Q9C0C7 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.28□□□□□ -1.56
AMBRA1Q9C0C7 MTCO1P49-201ENST00000523429 802 ntBASIC5.28□□□□□ -1.56
AMBRA1Q9C0C7 IGHVIII-67-4-201ENST00000524281 296 ntBASIC5.28□□□□□ -1.56
AMBRA1Q9C0C7 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC5.28□□□□□ -1.56
AMBRA1Q9C0C7 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC5.28□□□□□ -1.56
AMBRA1Q9C0C7 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.28□□□□□ -1.56
AMBRA1Q9C0C7 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC5.28□□□□□ -1.56
AMBRA1Q9C0C7 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC5.28□□□□□ -1.56
AMBRA1Q9C0C7 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.28□□□□□ -1.56
AMBRA1Q9C0C7 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
AMBRA1Q9C0C7 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC5.28□□□□□ -1.56
AMBRA1Q9C0C7 ELOCP32-201ENST00000548625 324 ntBASIC5.28□□□□□ -1.56
AMBRA1Q9C0C7 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC5.28□□□□□ -1.56
AMBRA1Q9C0C7 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.28□□□□□ -1.56
AMBRA1Q9C0C7 AC096996.1-201ENST00000563813 325 ntBASIC5.28□□□□□ -1.56
AMBRA1Q9C0C7 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.28□□□□□ -1.56
AMBRA1Q9C0C7 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC5.28□□□□□ -1.56
AMBRA1Q9C0C7 MIR5708-201ENST00000579723 85 ntBASIC5.28□□□□□ -1.56
AMBRA1Q9C0C7 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC5.28□□□□□ -1.56
AMBRA1Q9C0C7 RPL12P48-201ENST00000605620 304 ntBASIC5.28□□□□□ -1.56
AMBRA1Q9C0C7 OR2AS2P-201ENST00000606902 342 ntBASIC5.28□□□□□ -1.56
AMBRA1Q9C0C7 AL139124.1-201ENST00000609123 421 ntBASIC5.28□□□□□ -1.56
AMBRA1Q9C0C7 MIR6793-201ENST00000612376 63 ntBASIC5.28□□□□□ -1.56
AMBRA1Q9C0C7 AC011472.4-201ENST00000615848 491 ntBASIC5.28□□□□□ -1.56
AMBRA1Q9C0C7 STMN1P1-201ENST00000617809 440 ntBASIC5.28□□□□□ -1.56
AMBRA1Q9C0C7 AC026585.1-201ENST00000619582 524 ntBASIC5.28□□□□□ -1.56
AMBRA1Q9C0C7 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC5.28□□□□□ -1.56
AMBRA1Q9C0C7 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.28□□□□□ -1.56
AMBRA1Q9C0C7 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.28□□□□□ -1.56
AMBRA1Q9C0C7 AL049767.1-202ENST00000637826 242 ntBASIC5.28□□□□□ -1.56
AMBRA1Q9C0C7 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
AMBRA1Q9C0C7 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.28□□□□□ -1.56
AMBRA1Q9C0C7 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
AMBRA1Q9C0C7 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.28□□□□□ -1.56
AMBRA1Q9C0C7 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.28□□□□□ -1.56
AMBRA1Q9C0C7 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.28□□□□□ -1.56
AMBRA1Q9C0C7 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC5.28□□□□□ -1.56
AMBRA1Q9C0C7 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.28□□□□□ -1.56
AMBRA1Q9C0C7 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
AMBRA1Q9C0C7 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.28□□□□□ -1.56
AMBRA1Q9C0C7 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
AMBRA1Q9C0C7 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
AMBRA1Q9C0C7 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.28□□□□□ -1.56
AMBRA1Q9C0C7 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
AMBRA1Q9C0C7 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
AMBRA1Q9C0C7 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
AMBRA1Q9C0C7 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
AMBRA1Q9C0C7 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
AMBRA1Q9C0C7 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
AMBRA1Q9C0C7 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
AMBRA1Q9C0C7 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
AMBRA1Q9C0C7 RNA5SP273-201ENST00000362484 113 ntBASIC5.27□□□□□ -1.57
AMBRA1Q9C0C7 snoZ40.1-201ENST00000364540 72 ntBASIC5.27□□□□□ -1.57
AMBRA1Q9C0C7 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
AMBRA1Q9C0C7 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
AMBRA1Q9C0C7 ATP5F1P3-201ENST00000397213 657 ntBASIC5.27□□□□□ -1.57
AMBRA1Q9C0C7 RSL24D1P4-201ENST00000400938 484 ntBASIC5.27□□□□□ -1.57
AMBRA1Q9C0C7 RNA5SP498-201ENST00000411342 120 ntBASIC5.27□□□□□ -1.57
AMBRA1Q9C0C7 AL354890.1-201ENST00000413730 346 ntBASIC5.27□□□□□ -1.57
AMBRA1Q9C0C7 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC5.27□□□□□ -1.57
AMBRA1Q9C0C7 AC006960.1-201ENST00000419980 153 ntBASIC5.27□□□□□ -1.57
AMBRA1Q9C0C7 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC5.27□□□□□ -1.57
AMBRA1Q9C0C7 BX284632.2-201ENST00000421091 399 ntBASIC5.27□□□□□ -1.57
AMBRA1Q9C0C7 DPY19L1P2-201ENST00000426647 915 ntBASIC5.27□□□□□ -1.57
AMBRA1Q9C0C7 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC5.27□□□□□ -1.57
AMBRA1Q9C0C7 AL512605.1-202ENST00000441919 381 ntBASIC5.27□□□□□ -1.57
AMBRA1Q9C0C7 AC016772.1-201ENST00000444170 1261 ntBASIC5.27□□□□□ -1.57
AMBRA1Q9C0C7 EEF1B2P5-201ENST00000444820 548 ntBASIC5.27□□□□□ -1.57
AMBRA1Q9C0C7 AL161636.2-201ENST00000445179 927 ntBASIC5.27□□□□□ -1.57
AMBRA1Q9C0C7 AL359955.2-201ENST00000445380 353 ntBASIC5.27□□□□□ -1.57
AMBRA1Q9C0C7 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.27□□□□□ -1.57
AMBRA1Q9C0C7 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.27□□□□□ -1.57
AMBRA1Q9C0C7 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC5.27□□□□□ -1.57
AMBRA1Q9C0C7 AC093166.4-201ENST00000457867 318 ntBASIC5.27□□□□□ -1.57
AMBRA1Q9C0C7 AC092754.2-201ENST00000463506 460 ntBASIC5.27□□□□□ -1.57
AMBRA1Q9C0C7 RPS23P2-201ENST00000463671 415 ntBASIC5.27□□□□□ -1.57
AMBRA1Q9C0C7 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC5.27□□□□□ -1.57
AMBRA1Q9C0C7 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
AMBRA1Q9C0C7 RPS23P1-201ENST00000491662 432 ntBASIC5.27□□□□□ -1.57
AMBRA1Q9C0C7 RN7SL193P-201ENST00000491708 276 ntBASIC5.27□□□□□ -1.57
AMBRA1Q9C0C7 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.27□□□□□ -1.57
AMBRA1Q9C0C7 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms