Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AP000580.1-201ENST00000404439 358 ntBASIC4.86□□□□□ -1.63
TRIM4Q9C037 NUDT19P3-201ENST00000404698 555 ntBASIC4.86□□□□□ -1.63
TRIM4Q9C037 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
TRIM4Q9C037 AL356968.2-201ENST00000412769 1257 ntBASIC4.86□□□□□ -1.63
TRIM4Q9C037 CHEK2P3-201ENST00000416118 248 ntBASIC4.86□□□□□ -1.63
TRIM4Q9C037 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.86□□□□□ -1.63
TRIM4Q9C037 RPS4XP16-201ENST00000427198 791 ntBASIC4.86□□□□□ -1.63
TRIM4Q9C037 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.86□□□□□ -1.63
TRIM4Q9C037 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.86□□□□□ -1.63
TRIM4Q9C037 AC122718.1-201ENST00000439448 744 ntBASIC4.86□□□□□ -1.63
TRIM4Q9C037 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.86□□□□□ -1.63
TRIM4Q9C037 CYCSP42-201ENST00000450823 238 ntBASIC4.86□□□□□ -1.63
TRIM4Q9C037 AL121877.1-201ENST00000453704 622 ntBASIC4.86□□□□□ -1.63
TRIM4Q9C037 Z92846.1-201ENST00000456203 268 ntBASIC4.86□□□□□ -1.63
TRIM4Q9C037 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.86□□□□□ -1.63
TRIM4Q9C037 FAM133DP-201ENST00000464802 691 ntBASIC4.86□□□□□ -1.63
TRIM4Q9C037 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.86□□□□□ -1.63
TRIM4Q9C037 RN7SL41P-201ENST00000476144 297 ntBASIC4.86□□□□□ -1.63
TRIM4Q9C037 UBA52P3-201ENST00000491303 382 ntBASIC4.86□□□□□ -1.63
TRIM4Q9C037 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.86□□□□□ -1.63
TRIM4Q9C037 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.86□□□□□ -1.63
TRIM4Q9C037 AC008033.2-201ENST00000542626 177 ntBASIC4.86□□□□□ -1.63
TRIM4Q9C037 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.86□□□□□ -1.63
TRIM4Q9C037 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.86□□□□□ -1.63
TRIM4Q9C037 RPL21P7-201ENST00000557463 483 ntBASIC4.86□□□□□ -1.63
TRIM4Q9C037 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.86□□□□□ -1.63
TRIM4Q9C037 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
TRIM4Q9C037 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
TRIM4Q9C037 AC006338.2-201ENST00000616864 791 ntBASIC4.86□□□□□ -1.63
TRIM4Q9C037 AL356121.2-201ENST00000624715 780 ntBASIC4.86□□□□□ -1.63
TRIM4Q9C037 AC068724.3-201ENST00000625906 87 ntBASIC4.86□□□□□ -1.63
TRIM4Q9C037 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.86□□□□□ -1.63
TRIM4Q9C037 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
TRIM4Q9C037 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
TRIM4Q9C037 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
TRIM4Q9C037 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.85□□□□□ -1.63
TRIM4Q9C037 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TRIM4Q9C037 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.85□□□□□ -1.63
TRIM4Q9C037 RNA5SP223-201ENST00000365174 120 ntBASIC4.85□□□□□ -1.63
TRIM4Q9C037 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
TRIM4Q9C037 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TRIM4Q9C037 AL390316.1-201ENST00000406279 553 ntBASIC4.85□□□□□ -1.63
TRIM4Q9C037 AL512430.2-201ENST00000406786 339 ntBASIC4.85□□□□□ -1.63
TRIM4Q9C037 RPL23AP48-201ENST00000406913 488 ntBASIC4.85□□□□□ -1.63
TRIM4Q9C037 MIR1182-201ENST00000408363 97 ntBASIC4.85□□□□□ -1.63
TRIM4Q9C037 SNORA11C-201ENST00000408532 129 ntBASIC4.85□□□□□ -1.63
TRIM4Q9C037 AC092570.3-201ENST00000420113 693 ntBASIC4.85□□□□□ -1.63
TRIM4Q9C037 AC013470.3-201ENST00000420252 1194 ntBASIC4.85□□□□□ -1.63
TRIM4Q9C037 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.85□□□□□ -1.63
TRIM4Q9C037 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.85□□□□□ -1.63
TRIM4Q9C037 snoU13.1-201ENST00000459157 104 ntBASIC4.85□□□□□ -1.63
TRIM4Q9C037 RPL7P40-201ENST00000481703 745 ntBASIC4.85□□□□□ -1.63
TRIM4Q9C037 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
TRIM4Q9C037 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.85□□□□□ -1.63
TRIM4Q9C037 RPS6P4-201ENST00000494693 758 ntBASIC4.85□□□□□ -1.63
TRIM4Q9C037 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
TRIM4Q9C037 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.85□□□□□ -1.63
TRIM4Q9C037 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.85□□□□□ -1.63
TRIM4Q9C037 AC009643.1-201ENST00000532030 391 ntBASIC4.85□□□□□ -1.63
TRIM4Q9C037 AC134349.2-201ENST00000535136 910 ntBASIC4.85□□□□□ -1.63
TRIM4Q9C037 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.85□□□□□ -1.63
TRIM4Q9C037 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
TRIM4Q9C037 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.85□□□□□ -1.63
TRIM4Q9C037 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC4.85□□□□□ -1.63
TRIM4Q9C037 MIR5096-201ENST00000583713 70 ntBASIC4.85□□□□□ -1.63
TRIM4Q9C037 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.85□□□□□ -1.63
TRIM4Q9C037 AL590392.1-201ENST00000604960 446 ntBASIC4.85□□□□□ -1.63
TRIM4Q9C037 IMMP1LP1-201ENST00000605170 488 ntBASIC4.85□□□□□ -1.63
TRIM4Q9C037 AC018695.5-201ENST00000605872 315 ntBASIC4.85□□□□□ -1.63
TRIM4Q9C037 AC015813.4-201ENST00000610469 179 ntBASIC4.85□□□□□ -1.63
TRIM4Q9C037 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC4.85□□□□□ -1.63
TRIM4Q9C037 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.85□□□□□ -1.63
TRIM4Q9C037 AL359757.1-201ENST00000623176 255 ntBASIC4.85□□□□□ -1.63
TRIM4Q9C037 AC112694.2-201ENST00000623697 768 ntBASIC4.85□□□□□ -1.63
TRIM4Q9C037 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.85□□□□□ -1.63
TRIM4Q9C037 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.85□□□□□ -1.63
TRIM4Q9C037 OR52H1-202ENST00000641796 1061 ntBASIC4.85□□□□□ -1.63
TRIM4Q9C037 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
TRIM4Q9C037 Z98755.1-201ENST00000407015 1384 ntBASIC4.85□□□□□ -1.63
TRIM4Q9C037 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
TRIM4Q9C037 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.85□□□□□ -1.63
TRIM4Q9C037 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
TRIM4Q9C037 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.85□□□□□ -1.63
TRIM4Q9C037 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.85□□□□□ -1.63
TRIM4Q9C037 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.85□□□□□ -1.63
TRIM4Q9C037 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.85□□□□□ -1.63
TRIM4Q9C037 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.85□□□□□ -1.63
TRIM4Q9C037 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.85□□□□□ -1.63
TRIM4Q9C037 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.85□□□□□ -1.63
TRIM4Q9C037 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.85□□□□□ -1.63
TRIM4Q9C037 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TRIM4Q9C037 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
TRIM4Q9C037 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
TRIM4Q9C037 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
TRIM4Q9C037 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
TRIM4Q9C037 AC079741.1-201ENST00000321498 212 ntBASIC4.84□□□□□ -1.63
TRIM4Q9C037 AC004975.1-201ENST00000428733 208 ntBASIC4.84□□□□□ -1.63
TRIM4Q9C037 AL161722.2-201ENST00000434731 981 ntBASIC4.84□□□□□ -1.63
TRIM4Q9C037 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.84□□□□□ -1.63
TRIM4Q9C037 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms